RNA–Protein interactions for RNA: YNR038W

DBP6, Transcript of Essential protein involved in ribosome biogenesis, yeast

Gene DBP6, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP6	YNR038W	ADH5	P38113	351 aa	Known RBP	0.9	□□□□□ -2.27
DBP6	YNR038W	SEC28	P40509	296 aa	Known RBP	0.9	□□□□□ -2.27
DBP6	YNR038W	ROG1	P53118	685 aa		0.9	□□□□□ -2.27
DBP6	YNR038W	SLT2	Q00772	484 aa		0.9	□□□□□ -2.27
DBP6	YNR038W	MEH1	Q02205	184 aa		0.9	□□□□□ -2.27
DBP6	YNR038W	NDL1	Q06568	189 aa		0.9	□□□□□ -2.27
DBP6	YNR038W	NOP6	Q07623	225 aa	Known RBP	0.9	□□□□□ -2.27
DBP6	YNR038W	NSE1	Q07913	336 aa		0.9	□□□□□ -2.27
DBP6	YNR038W	DCI1	Q08558	271 aa		0.9	□□□□□ -2.27
DBP6	YNR038W	YDL109C	Q12103	647 aa		0.9	□□□□□ -2.27
DBP6	YNR038W	ARF1	P11076	181 aa	Known RBP	0.89	□□□□□ -2.27
DBP6	YNR038W	TPM1	P17536	199 aa	Known RBP	0.89	□□□□□ -2.27
DBP6	YNR038W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
DBP6	YNR038W	QDR3	P38227	689 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	YSW1	P38280	609 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	SEC27	P41811	889 aa	Known RBP	0.89	□□□□□ -2.27
DBP6	YNR038W	YJL055W	P47044	245 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	PMT5	P52867	743 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	YPL113C	Q02961	396 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	ERO1	Q03103	563 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	RCF1	Q03713	159 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	AEP3	Q12089	606 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	SKS1	Q12505	502 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	SFG1	Q12507	346 aa		0.89	□□□□□ -2.27
DBP6	YNR038W	RPL23A	P0CX41	137 aa	Known RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	RPL23B	P0CX42	137 aa	Known RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	MIR1	P23641	311 aa	Known RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	RIM1	P32445	135 aa	Known RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	SWI3	P32591	825 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	YSC83	P32792	385 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	BLI1	P35727	113 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	DOA1	P36037	715 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	YMR262W	P38430	313 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	YHR177W	P38867	453 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	GDI1	P39958	451 aa	Known RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	AIM23	P47015	356 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	MLC1	P53141	149 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	YPR078C	Q06813	372 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	PRP46	Q12417	451 aa	Predicted RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	FRE6	Q12473	712 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	VPH1	P32563	840 aa	Known RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
DBP6	YNR038W	SIF2	P38262	535 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	NAS2	P40555	220 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	MNN5	P46982	586 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	YGR016W	P53209	190 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	UTP6	Q02354	440 aa	Known RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	YDR541C	Q03049	344 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	URC2	Q04411	772 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	YDR286C	Q05530	114 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	RLP24	Q07915	199 aa	Known RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	PLB3	Q08108	686 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	CLP1	Q08685	445 aa	Predicted RBP	0.88	□□□□□ -2.27
DBP6	YNR038W	NFI1	Q12216	726 aa		0.88	□□□□□ -2.27
DBP6	YNR038W	TDH2	P00358	332 aa	Known RBP	0.87	□□□□□ -2.27
DBP6	YNR038W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.87	□□□□□ -2.27	not detected
DBP6	YNR038W	OPI3	P05375	206 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	OPI1	P21957	404 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	SLM5	P25345	492 aa	Known RBP	0.87	□□□□□ -2.27
DBP6	YNR038W	PHO91	P27514	894 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	FAA1	P30624	700 aa	Known RBP	0.87	□□□□□ -2.27
DBP6	YNR038W	PMT2	P31382	759 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	YKR032W	P36127	104 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	YBL081W	P38180	368 aa	Known RBP	0.87	□□□□□ -2.27
DBP6	YNR038W	SPP381	P38282	291 aa	Predicted RBP	0.87	□□□□□ -2.27
DBP6	YNR038W	MNL1	P38888	796 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	SMC2	P38989	1170 aa	Known RBP	0.87	□□□□□ -2.27
DBP6	YNR038W	EFM3	P47163	339 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	SHE4	P51534	789 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	GTO3	Q04806	366 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	GAS2	Q06135	555 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	DBP9	Q06218	594 aa	Known RBP	0.87	□□□□□ -2.27
DBP6	YNR038W	IPK1	Q06667	281 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	YFH1	Q07540	174 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	PGC1	Q08959	321 aa		0.87	□□□□□ -2.27
DBP6	YNR038W	RPS16A	P0CX51	143 aa	Known RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	RPS16B	P0CX52	143 aa	Known RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	RNA1	P11745	407 aa	Known RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	LAS1	P36146	502 aa	Predicted RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	PAC11	P40960	533 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	RTT102	P53330	157 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	CDD1	Q06549	142 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	DIB1	Q06819	143 aa	Predicted RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	PML1	Q07930	204 aa	Predicted RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	PSY3	Q12318	242 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	AIM45	Q12480	344 aa	Known RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	PDE2	P06776	526 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	DAL81	P21657	970 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	UBA1	P22515	1024 aa	Known RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	PSO2	P30620	661 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	UIP5	P36137	443 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	DAD2	P36162	133 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	CAJ1	P39101	391 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	LCP5	P40079	357 aa	Predicted RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	PCL7	P40186	285 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	EPL1	P43572	832 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	FYV8	P46949	817 aa	Known RBP	0.86	□□□□□ -2.27
DBP6	YNR038W	YNR068C	P53754	272 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	YNL143C	P53908	130 aa		0.86	□□□□□ -2.27
DBP6	YNR038W	EOS1	P53938	366 aa		0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms