RNA–Protein interactions for RNA: YMR284W

YKU70, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeast

Gene YKU70, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKU70	YMR284W	ECO1	P43605	281 aa		0.38	□□□□□ -2.35
YKU70	YMR284W	YFR045W	P43617	309 aa		0.38	□□□□□ -2.35
YKU70	YMR284W	INP1	Q03694	420 aa		0.38	□□□□□ -2.35
YKU70	YMR284W	URC2	Q04411	772 aa		0.38	□□□□□ -2.35
YKU70	YMR284W	NSE1	Q07913	336 aa		0.38	□□□□□ -2.35
YKU70	YMR284W	MRP7	P12687	371 aa		0.37	□□□□□ -2.35
YKU70	YMR284W	REC107	P21651	314 aa		0.37	□□□□□ -2.35
YKU70	YMR284W	BYE1	P36106	594 aa		0.37	□□□□□ -2.35
YKU70	YMR284W	QDR3	P38227	689 aa		0.37	□□□□□ -2.35
YKU70	YMR284W	ZTA1	P38230	334 aa	Known RBP	0.37	□□□□□ -2.35
YKU70	YMR284W	MRPL19	P53875	158 aa		0.37	□□□□□ -2.35
YKU70	YMR284W	YDR341C	Q05506	607 aa	Known RBP	0.37	□□□□□ -2.35
YKU70	YMR284W	MRX4	Q12467	430 aa		0.37	□□□□□ -2.35
YKU70	YMR284W	AFI1	Q99222	893 aa		0.37	□□□□□ -2.35
YKU70	YMR284W	RED1	P14291	827 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.36	□□□□□ -2.35	not detected
YKU70	YMR284W	YKR015C	P36111	568 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	MOB2	P43563	287 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	CAX4	P53223	239 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	CGI121	Q03705	181 aa	Known RBP	0.36	□□□□□ -2.35
YKU70	YMR284W	YLH47	Q06493	454 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	SLM3	Q12093	417 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	PGA3	Q12746	312 aa	Known RBP	0.36	□□□□□ -2.35
YKU70	YMR284W	NRG2	P38082	220 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	YFR054C	P43622	192 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	SUR7	P54003	302 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	TFC7	Q12415	435 aa		0.36	□□□□□ -2.35
YKU70	YMR284W	RNA1	P11745	407 aa	Known RBP	0.35	□□□□□ -2.35
YKU70	YMR284W	TFS1	P14306	219 aa		0.35	□□□□□ -2.35
YKU70	YMR284W	YSC83	P32792	385 aa		0.35	□□□□□ -2.35
YKU70	YMR284W	IST2	P38250	946 aa		0.35	□□□□□ -2.35
YKU70	YMR284W	POP2	P39008	433 aa		0.35	□□□□□ -2.35
YKU70	YMR284W	DAN1	P47178	298 aa		0.35	□□□□□ -2.35
YKU70	YMR284W	SYF2	P53277	215 aa	Predicted RBP	0.35	□□□□□ -2.35
YKU70	YMR284W	BNI5	P53890	448 aa	Known RBP	0.35	□□□□□ -2.35
YKU70	YMR284W	IES3	Q12345	250 aa		0.35	□□□□□ -2.35
YKU70	YMR284W	YFR018C	P43599	363 aa		0.34	□□□□□ -2.35
YKU70	YMR284W	TRM82	Q03774	444 aa		0.34	□□□□□ -2.35
YKU70	YMR284W	AEP3	Q12089	606 aa		0.34	□□□□□ -2.35
YKU70	YMR284W	VPS63	O13549	108 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	PHO80	P20052	293 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	ERV1	P27882	189 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	URA10	P30402	227 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	CLB6	P32943	380 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	CTM1	P38818	585 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	YIL054W	P40524	105 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	GPD2	P41911	440 aa	Known RBP	0.34	□□□□□ -2.36
YKU70	YMR284W	MIC19	P43594	170 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	RTS3	P53289	263 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	YLR456W	Q06199	204 aa		0.34	□□□□□ -2.36
YKU70	YMR284W	RRP7	P25368	297 aa	Predicted RBP	0.33	□□□□□ -2.36
YKU70	YMR284W	PHO91	P27514	894 aa		0.33	□□□□□ -2.36
YKU70	YMR284W	ITR2	P30606	609 aa		0.33	□□□□□ -2.36
YKU70	YMR284W	FAD1	P38913	306 aa		0.33	□□□□□ -2.36
YKU70	YMR284W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.33	□□□□□ -2.36	not detected
YKU70	YMR284W	PAC11	P40960	533 aa		0.33	□□□□□ -2.36
YKU70	YMR284W	HIT1	P46973	164 aa		0.33	□□□□□ -2.36
YKU70	YMR284W	TAF11	Q04226	346 aa		0.33	□□□□□ -2.36
YKU70	YMR284W	ALE1	Q08548	619 aa		0.33	□□□□□ -2.36
YKU70	YMR284W	YHR086W-A	Q3E746	53 aa		0.33	□□□□□ -2.36
YKU70	YMR284W	FAR1	P21268	830 aa		0.32	□□□□□ -2.36
YKU70	YMR284W	MRPL20	P22354	195 aa	Predicted RBP	0.32	□□□□□ -2.36
YKU70	YMR284W	URA7	P28274	579 aa	Known RBP	0.32	□□□□□ -2.36
YKU70	YMR284W	YKL071W	P36086	256 aa		0.32	□□□□□ -2.36
YKU70	YMR284W	FMP48	P53233	369 aa		0.32	□□□□□ -2.36
YKU70	YMR284W	NOP6	Q07623	225 aa	Known RBP	0.32	□□□□□ -2.36
YKU70	YMR284W	DSK2	P48510	373 aa		0.31	□□□□□ -2.36
YKU70	YMR284W	YGL118C	P53132	145 aa		0.31	□□□□□ -2.36
YKU70	YMR284W	RTT102	P53330	157 aa		0.31	□□□□□ -2.36
YKU70	YMR284W	UBX2	Q04228	584 aa		0.31	□□□□□ -2.36
YKU70	YMR284W	DET1	Q99288	334 aa	Known RBP	0.31	□□□□□ -2.36
YKU70	YMR284W	MRPL8	P22353	238 aa		0.31	□□□□□ -2.36
YKU70	YMR284W	RFT1	P38206	574 aa	Predicted RBP	0.31	□□□□□ -2.36
YKU70	YMR284W	NOC2	P39744	710 aa	Known RBP	0.31	□□□□□ -2.36
YKU70	YMR284W	RDS3	Q06835	107 aa	Predicted RBP	0.31	□□□□□ -2.36
YKU70	YMR284W	SHS1	Q07657	551 aa		0.31	□□□□□ -2.36
YKU70	YMR284W	VPS68	Q12016	184 aa		0.31	□□□□□ -2.36
YKU70	YMR284W	UBA3	Q99344	299 aa		0.31	□□□□□ -2.36
YKU70	YMR284W	SSU72	P53538	206 aa	Predicted RBP	0.3	□□□□□ -2.36
YKU70	YMR284W	AAD15	Q08361	143 aa		0.3	□□□□□ -2.36
YKU70	YMR284W	RPN8	Q08723	338 aa	Known RBP	0.3	□□□□□ -2.36
YKU70	YMR284W	VPS72	Q03388	795 aa		0.29	□□□□□ -2.36
YKU70	YMR284W	YHR182W	P38870	785 aa		0.29	□□□□□ -2.36
YKU70	YMR284W	SLM1	P40485	686 aa		0.29	□□□□□ -2.36
YKU70	YMR284W	MIG2	P53035	382 aa		0.29	□□□□□ -2.36
YKU70	YMR284W	YNL040W	P53960	456 aa	Predicted RBP	0.29	□□□□□ -2.36
YKU70	YMR284W	DCR2	Q05924	578 aa		0.29	□□□□□ -2.36
YKU70	YMR284W	PEX5	P35056	612 aa		0.28	□□□□□ -2.36
YKU70	YMR284W	YHR177W	P38867	453 aa		0.28	□□□□□ -2.36
YKU70	YMR284W	FCY21	P40039	528 aa		0.28	□□□□□ -2.36
YKU70	YMR284W	ACT1	P60010	375 aa	Known RBP	0.28	□□□□□ -2.36
YKU70	YMR284W	YMR166C	Q03829	368 aa		0.28	□□□□□ -2.36
YKU70	YMR284W	RRI2	Q12348	645 aa		0.28	□□□□□ -2.36
YKU70	YMR284W	YOR012W	Q12351	137 aa		0.28	□□□□□ -2.36
YKU70	YMR284W	SFI1	Q12369	946 aa		0.28	□□□□□ -2.36
YKU70	YMR284W	PDE2	P06776	526 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	CDC42	P19073	191 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	ADK2	P26364	225 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	NFU1	P32860	256 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	SMF2	P38778	549 aa		0.27	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms