RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W SIR2P06700 562 aa3.56□□□□□ -1.84
ECM16YMR128W RPS17BP14127 136 aaKnown RBP3.56□□□□□ -1.84
ECM16YMR128W TIP20P33891 701 aa3.56□□□□□ -1.84
ECM16YMR128W KTR4P38131 464 aa3.56□□□□□ -1.84
ECM16YMR128W IFA38P38286 347 aa3.56□□□□□ -1.84
ECM16YMR128W PLB1P39105 664 aa3.56□□□□□ -1.84
ECM16YMR128W YIL089WP40500 205 aa3.56□□□□□ -1.84
ECM16YMR128W MEP3P53390 489 aa3.56□□□□□ -1.84
ECM16YMR128W IMP4P53941 290 aaKnown RBP3.56□□□□□ -1.84
ECM16YMR128W SNP1Q00916 300 aaPredicted RBP3.56□□□□□ -1.84
ECM16YMR128W GAD1Q04792 585 aa3.56□□□□□ -1.84
ECM16YMR128W YLR036CQ07986 203 aa3.56□□□□□ -1.84
ECM16YMR128W SYC1Q08553 188 aaPredicted RBP3.56□□□□□ -1.84
ECM16YMR128W LYS21Q12122 440 aaKnown RBP3.56□□□□□ -1.84
ECM16YMR128W YOR019WQ99248 730 aa3.56□□□□□ -1.84
ECM16YMR128W DSF1P0CX08 502 aa3.55□□□□□ -1.84
ECM16YMR128W YNR073CP0CX09 502 aa3.55□□□□□ -1.84
ECM16YMR128W RED1P14291 827 aa3.55□□□□□ -1.84
ECM16YMR128W ERD1P16151 362 aa3.55□□□□□ -1.84
ECM16YMR128W ARF2P19146 181 aaKnown RBP3.55□□□□□ -1.84
ECM16YMR128W ERG4P25340 473 aa3.55□□□□□ -1.84
ECM16YMR128W HOM6P31116 359 aaKnown RBP3.55□□□□□ -1.84
ECM16YMR128W HXT4P32467 576 aa3.55□□□□□ -1.84
ECM16YMR128W MKK1P32490 508 aa3.55□□□□□ -1.84
ECM16YMR128W YCR087C-AP37263 153 aa3.55□□□□□ -1.84
ECM16YMR128W YHR035WP38769 630 aa3.55□□□□□ -1.84
ECM16YMR128W PCL5P38794 229 aa3.55□□□□□ -1.84
ECM16YMR128W YHR122WP38829 231 aa3.55□□□□□ -1.84
ECM16YMR128W GZF3P42944 551 aaKnown RBP3.55□□□□□ -1.84
ECM16YMR128W PLM2Q04383 521 aa3.55□□□□□ -1.84
ECM16YMR128W YLR046CQ12253 270 aa3.55□□□□□ -1.84
ECM16YMR128W SRN2Q99176 213 aa3.55□□□□□ -1.84
ECM16YMR128W RPL3P14126 387 aaKnown RBP3.55□□□□□ -1.84
ECM16YMR128W PEX1P24004 1043 aa3.55□□□□□ -1.84
ECM16YMR128W GEX1P25596 615 aa3.55□□□□□ -1.84
ECM16YMR128W PMT1P33775 817 aa3.55□□□□□ -1.84
ECM16YMR128W GEX2P36173 615 aa3.55□□□□□ -1.84
ECM16YMR128W SHE1P38200 338 aa3.55□□□□□ -1.84
ECM16YMR128W TCM62P38228 572 aaKnown RBP3.55□□□□□ -1.84
ECM16YMR128W INM1P38710 295 aa3.55□□□□□ -1.84
ECM16YMR128W IME4P41833 600 aa3.55□□□□□ -1.84
ECM16YMR128W GIP3Q03016 1276 aa3.55□□□□□ -1.84
ECM16YMR128W SIZ1Q04195 904 aa3.55□□□□□ -1.84
ECM16YMR128W RNH202Q05635 350 aa3.55□□□□□ -1.84
ECM16YMR128W SSK1Q07084 712 aa3.55□□□□□ -1.84
ECM16YMR128W CRT10Q08226 957 aa3.55□□□□□ -1.84
ECM16YMR128W YOR352WQ08816 343 aa3.55□□□□□ -1.84
ECM16YMR128W YDR056CQ12025 205 aa3.55□□□□□ -1.84
ECM16YMR128W RGT2Q12300 763 aa3.55□□□□□ -1.84
ECM16YMR128W CAR2P07991 424 aaKnown RBP3.55□□□□□ -1.84
ECM16YMR128W MET8P15807 274 aa3.55□□□□□ -1.84
ECM16YMR128W DBP3P20447 523 aaKnown RBP3.55□□□□□ -1.84
ECM16YMR128W YCR100CP25606 316 aa3.55□□□□□ -1.84
ECM16YMR128W RSC6P25632 483 aa3.55□□□□□ -1.84
ECM16YMR128W FUB1P25659 250 aa3.55□□□□□ -1.84
ECM16YMR128W CDS1P38221 457 aa3.55□□□□□ -1.84
ECM16YMR128W HTD2P38790 280 aaKnown RBP3.55□□□□□ -1.84
ECM16YMR128W BIG1P38813 335 aa3.55□□□□□ -1.84
ECM16YMR128W YHR177WP38867 453 aa3.55□□□□□ -1.84
ECM16YMR128W SKN7P38889 622 aa3.55□□□□□ -1.84
ECM16YMR128W YFR018CP43599 363 aa3.55□□□□□ -1.84
ECM16YMR128W YJR030CP47101 745 aa3.55□□□□□ -1.84
ECM16YMR128W MRX6P48564 524 aa3.55□□□□□ -1.84
ECM16YMR128W TOM22P49334 152 aa3.55□□□□□ -1.84
ECM16YMR128W BUD17P53727 317 aa3.55□□□□□ -1.84
ECM16YMR128W YNL140CP53910 189 aa3.55□□□□□ -1.84
ECM16YMR128W EMI2Q04409 500 aaKnown RBP3.55□□□□□ -1.84
ECM16YMR128W YMR252CQ04814 134 aa3.55□□□□□ -1.84
ECM16YMR128W DIN7Q12086 430 aa3.55□□□□□ -1.84
ECM16YMR128W MRX4Q12467 430 aa3.55□□□□□ -1.84
ECM16YMR128W MTR10Q99189 972 aa3.55□□□□□ -1.84
ECM16YMR128W ARO3P14843 370 aaKnown RBP3.54□□□□□ -1.84
ECM16YMR128W HNM1P19807 563 aa3.54□□□□□ -1.84
ECM16YMR128W SIR1P21691 654 aa3.54□□□□□ -1.84
ECM16YMR128W RPS1BP23248 255 aaKnown RBP3.54□□□□□ -1.84
ECM16YMR128W BUD5P25300 642 aaPredicted RBP3.54□□□□□ -1.84
ECM16YMR128W RRP7P25368 297 aaPredicted RBP3.54□□□□□ -1.84
ECM16YMR128W VMA8P32610 256 aaKnown RBP3.54□□□□□ -1.84
ECM16YMR128W VPS17P32913 551 aa3.54□□□□□ -1.84
ECM16YMR128W NNK1P36003 928 aa3.54□□□□□ -1.84
ECM16YMR128W MAD2P40958 196 aa3.54□□□□□ -1.84
ECM16YMR128W IDS2P46958 469 aa3.54□□□□□ -1.84
ECM16YMR128W YDL183CP48569 320 aa3.54□□□□□ -1.84
ECM16YMR128W HLR1Q04429 423 aa3.54□□□□□ -1.84
ECM16YMR128W SWF1Q04629 336 aa3.54□□□□□ -1.84
ECM16YMR128W YLR283WQ05867 314 aa3.54□□□□□ -1.84
ECM16YMR128W NMA1Q06178 401 aaKnown RBP3.54□□□□□ -1.84
ECM16YMR128W YLR446WQ06204 433 aa3.54□□□□□ -1.84
ECM16YMR128W TEN1Q07921 160 aa3.54□□□□□ -1.84
ECM16YMR128W TMS1Q12116 473 aa3.54□□□□□ -1.84
ECM16YMR128W NDJ1Q12366 352 aa3.54□□□□□ -1.84
ECM16YMR128W HAP2P06774 265 aa3.54□□□□□ -1.84
ECM16YMR128W GCD1P09032 578 aaPredicted RBP3.54□□□□□ -1.84
ECM16YMR128W TFS1P14306 219 aa3.54□□□□□ -1.84
ECM16YMR128W ACB1P31787 87 aa3.54□□□□□ -1.84
ECM16YMR128W SPO23P33757 523 aa3.54□□□□□ -1.84
ECM16YMR128W FLO10P36170 1169 aa3.54□□□□□ -1.84
ECM16YMR128W RRF1P38771 230 aa3.54□□□□□ -1.84
ECM16YMR128W AIM2P39721 246 aa3.54□□□□□ -1.84
ECM16YMR128W UFE1P41834 346 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms