RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C SIA1Q12212 622 aa9.5□□□□□ -0.89
SHM2YLR058C GCN1P33892 2672 aaKnown RBP9.5□□□□□ -0.89
SHM2YLR058C DPM1P14020 267 aaKnown RBP9.49□□□□□ -0.89
SHM2YLR058C MRPS28P21771 286 aa9.49□□□□□ -0.89
SHM2YLR058C CWH43P25618 953 aa9.49□□□□□ -0.89
SHM2YLR058C CPR3P25719 182 aa9.49□□□□□ -0.89
SHM2YLR058C NAM9P27929 486 aa9.49□□□□□ -0.89
SHM2YLR058C SNC1P31109 117 aa9.49□□□□□ -0.89
SHM2YLR058C TIM12P32830 109 aa9.49□□□□□ -0.89
SHM2YLR058C RTC2P38279 296 aa9.49□□□□□ -0.89
SHM2YLR058C OM14P38325 134 aa9.49□□□□□ -0.89
SHM2YLR058C MTC4P38335 694 aaKnown RBP9.49□□□□□ -0.89
SHM2YLR058C YIL166CP40445 542 aa9.49□□□□□ -0.89
SHM2YLR058C RET2P43621 546 aa9.49□□□□□ -0.89
SHM2YLR058C ELP6Q04868 273 aa9.49□□□□□ -0.89
SHM2YLR058C YLR446WQ06204 433 aa9.49□□□□□ -0.89
SHM2YLR058C TRM10Q12400 293 aa9.49□□□□□ -0.89
SHM2YLR058C YDL007C-AQ2V2Q0 85 aa9.49□□□□□ -0.89
SHM2YLR058C ECM4P36156 370 aa9.48□□□□□ -0.89
SHM2YLR058C RPS20P38701 121 aaKnown RBP9.48□□□□□ -0.89
SHM2YLR058C SKN7P38889 622 aa9.48□□□□□ -0.89
SHM2YLR058C YPR127WQ06494 345 aa9.48□□□□□ -0.89
SHM2YLR058C AVO1Q08236 1176 aa9.48□□□□□ -0.89
SHM2YLR058C ENB1Q08299 606 aa9.48□□□□□ -0.89
SHM2YLR058C YGK3Q12222 375 aaPredicted RBP9.48□□□□□ -0.89
SHM2YLR058C ERD1P16151 362 aa9.48□□□□□ -0.89
SHM2YLR058C YPK2P18961 677 aa9.48□□□□□ -0.89
SHM2YLR058C PDR3P33200 976 aa9.48□□□□□ -0.89
SHM2YLR058C ARN2P38724 620 aa9.48□□□□□ -0.89
SHM2YLR058C YJL193WP39542 402 aa9.48□□□□□ -0.89
SHM2YLR058C KRE29P40026 464 aa9.48□□□□□ -0.89
SHM2YLR058C HXT9P40885 567 aa9.48□□□□□ -0.89
SHM2YLR058C HXT11P54862 567 aa9.48□□□□□ -0.89
SHM2YLR058C SNZ1Q03148 297 aa9.48□□□□□ -0.89
SHM2YLR058C CGI121Q03705 181 aaKnown RBP9.48□□□□□ -0.89
SHM2YLR058C YDR179W-AQ03983 463 aa9.48□□□□□ -0.89
SHM2YLR058C SNT309Q06091 175 aaPredicted RBP9.48□□□□□ -0.89
SHM2YLR058C YOR389WQ08912 624 aa9.48□□□□□ -0.89
SHM2YLR058C YPL278CQ08990 100 aa9.48□□□□□ -0.89
SHM2YLR058C MCP1Q12106 302 aa9.48□□□□□ -0.89
SHM2YLR058C VCX1Q99385 411 aa9.48□□□□□ -0.89
SHM2YLR058C RPP2BP02400 110 aaKnown RBP9.47□□□□□ -0.89
SHM2YLR058C MET17P06106 444 aa9.47□□□□□ -0.89
SHM2YLR058C IDP1P21954 428 aaKnown RBP9.47□□□□□ -0.89
SHM2YLR058C PRP28P23394 588 aa9.47□□□□□ -0.89
SHM2YLR058C HSP30P25619 332 aa9.47□□□□□ -0.89
SHM2YLR058C VMA6P32366 345 aaKnown RBP9.47□□□□□ -0.89
SHM2YLR058C DHR2P36009 735 aaPredicted RBP9.47□□□□□ -0.89
SHM2YLR058C MAE1P36013 669 aaKnown RBP9.47□□□□□ -0.89
SHM2YLR058C JEN1P36035 616 aa9.47□□□□□ -0.89
SHM2YLR058C ZRG8P40021 1076 aa9.47□□□□□ -0.89
SHM2YLR058C SER3P40054 469 aa9.47□□□□□ -0.89
SHM2YLR058C YGL101WP53144 215 aa9.47□□□□□ -0.89
SHM2YLR058C YNR062CP53748 327 aa9.47□□□□□ -0.89
SHM2YLR058C DML1Q03652 475 aa9.47□□□□□ -0.89
SHM2YLR058C OST6Q03723 332 aa9.47□□□□□ -0.89
SHM2YLR058C YDL109CQ12103 647 aa9.47□□□□□ -0.89
SHM2YLR058C ENA1P13587 1091 aa9.46□□□□□ -0.9
SHM2YLR058C GRE3P38715 327 aaKnown RBP RIP-Chip data9.46□□□□□ -0.9not detected
SHM2YLR058C RPP1P38786 293 aa9.46□□□□□ -0.9
SHM2YLR058C PKP1P40530 394 aa9.46□□□□□ -0.9
SHM2YLR058C STB1P42845 420 aa9.46□□□□□ -0.9
SHM2YLR058C IDS2P46958 469 aa9.46□□□□□ -0.9
SHM2YLR058C ENA2Q01896 1091 aa9.46□□□□□ -0.9
SHM2YLR058C RNH1Q04740 348 aa9.46□□□□□ -0.9
SHM2YLR058C SNO4Q04902 237 aa9.46□□□□□ -0.9
SHM2YLR058C EMG1Q06287 252 aaKnown RBP9.46□□□□□ -0.9
SHM2YLR058C GSH2Q08220 491 aa9.46□□□□□ -0.9
SHM2YLR058C RRG7Q08774 242 aaPredicted RBP9.46□□□□□ -0.9
SHM2YLR058C HSP33Q08914 237 aaKnown RBP9.46□□□□□ -0.9
SHM2YLR058C HSP32Q08992 237 aa9.46□□□□□ -0.9
SHM2YLR058C ENA5Q12691 1091 aa9.46□□□□□ -0.9
SHM2YLR058C YOR032W-AQ8TGS1 66 aa9.46□□□□□ -0.9
SHM2YLR058C RAD51P25454 400 aa9.45□□□□□ -0.9
SHM2YLR058C YCR102CP25608 368 aa9.45□□□□□ -0.9
SHM2YLR058C YHR180WP38868 163 aa9.45□□□□□ -0.9
SHM2YLR058C CHL4P38907 458 aa9.45□□□□□ -0.9
SHM2YLR058C YTA6P40328 754 aa9.45□□□□□ -0.9
SHM2YLR058C RPE1P46969 238 aa9.45□□□□□ -0.9
SHM2YLR058C MDE1P47095 244 aa9.45□□□□□ -0.9
SHM2YLR058C PFA5Q03289 374 aa9.45□□□□□ -0.9
SHM2YLR058C YDR209CQ03480 137 aa9.45□□□□□ -0.9
SHM2YLR058C ARP10Q04549 284 aa9.45□□□□□ -0.9
SHM2YLR058C YDL177CQ12257 170 aa9.45□□□□□ -0.9
SHM2YLR058C MET2P08465 486 aa9.44□□□□□ -0.9
SHM2YLR058C HAP4P14064 554 aa9.44□□□□□ -0.9
SHM2YLR058C SEC62P21825 274 aa9.44□□□□□ -0.9
SHM2YLR058C PRE2P30656 287 aaKnown RBP9.44□□□□□ -0.9
SHM2YLR058C PUP2P32379 260 aa9.44□□□□□ -0.9
SHM2YLR058C GPX1P36014 167 aa9.44□□□□□ -0.9
SHM2YLR058C GDI1P39958 451 aaKnown RBP9.44□□□□□ -0.9
SHM2YLR058C VNX1P42839 908 aa9.44□□□□□ -0.9
SHM2YLR058C GIS1Q03833 894 aa9.44□□□□□ -0.9
SHM2YLR058C SNX41Q04053 625 aa9.44□□□□□ -0.9
SHM2YLR058C PLM2Q04383 521 aa9.44□□□□□ -0.9
SHM2YLR058C BUR2Q05949 395 aa9.44□□□□□ -0.9
SHM2YLR058C YPQ2Q06328 317 aa9.44□□□□□ -0.9
SHM2YLR058C BTS1Q12051 335 aa9.44□□□□□ -0.9
SHM2YLR058C YRA1Q12159 226 aaKnown RBP9.44□□□□□ -0.9
SHM2YLR058C MDM32Q12171 622 aa9.44□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms