RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W FMP46P36141 133 aaKnown RBP3.46□□□□□ -1.85
CTK1YKL139W PTH1P38876 190 aaKnown RBP3.46□□□□□ -1.85
CTK1YKL139W FHL1P39521 936 aa3.46□□□□□ -1.85
CTK1YKL139W MST27P53176 234 aa3.46□□□□□ -1.85
CTK1YKL139W YGR266WP53326 701 aa3.46□□□□□ -1.85
CTK1YKL139W MKC7P53379 596 aa3.46□□□□□ -1.85
CTK1YKL139W REX2P54964 269 aaKnown RBP3.46□□□□□ -1.85
CTK1YKL139W YPL080CQ02826 108 aa3.46□□□□□ -1.85
CTK1YKL139W ELP3Q02908 557 aaKnown RBP3.46□□□□□ -1.85
CTK1YKL139W BCP1Q06338 283 aa3.46□□□□□ -1.85
CTK1YKL139W PBP4Q07362 185 aaKnown RBP3.46□□□□□ -1.85
CTK1YKL139W YPQ1Q12010 308 aa3.46□□□□□ -1.85
CTK1YKL139W YDL109CQ12103 647 aa3.46□□□□□ -1.85
CTK1YKL139W SIA1Q12212 622 aa3.46□□□□□ -1.85
CTK1YKL139W YDL199CQ12407 687 aa3.46□□□□□ -1.85
CTK1YKL139W RPT5P33297 434 aaKnown RBP3.46□□□□□ -1.86
CTK1YKL139W CSE2P33308 149 aa3.46□□□□□ -1.86
CTK1YKL139W YBL059WP34224 193 aa3.46□□□□□ -1.86
CTK1YKL139W SCC4P40090 624 aa3.46□□□□□ -1.86
CTK1YKL139W DFG10P40526 253 aa3.46□□□□□ -1.86
CTK1YKL139W OKP1P53298 406 aa3.46□□□□□ -1.86
CTK1YKL139W BIO4P53630 237 aa3.46□□□□□ -1.86
CTK1YKL139W YMR010WQ03687 405 aa3.46□□□□□ -1.86
CTK1YKL139W TDH1P00360 332 aaKnown RBP3.45□□□□□ -1.86
CTK1YKL139W HHF1P02309 103 aaKnown RBP3.45□□□□□ -1.86
CTK1YKL139W HEM4P06174 275 aa3.45□□□□□ -1.86
CTK1YKL139W RPL23AP0CX41 137 aaKnown RBP3.45□□□□□ -1.86
CTK1YKL139W RPL23BP0CX42 137 aaKnown RBP3.45□□□□□ -1.86
CTK1YKL139W ITR2P30606 609 aa3.45□□□□□ -1.86
CTK1YKL139W COT1P32798 439 aa3.45□□□□□ -1.86
CTK1YKL139W RCY1P39531 840 aa3.45□□□□□ -1.86
CTK1YKL139W EGT2P42835 1041 aa3.45□□□□□ -1.86
CTK1YKL139W YNL320WP42840 284 aa3.45□□□□□ -1.86
CTK1YKL139W COX16P47081 118 aa3.45□□□□□ -1.86
CTK1YKL139W YGL260WP53056 76 aa3.45□□□□□ -1.86
CTK1YKL139W TIM11P81449 96 aaPredicted RBP3.45□□□□□ -1.86
CTK1YKL139W ATC1Q04005 294 aa3.45□□□□□ -1.86
CTK1YKL139W MFG1Q07684 458 aa3.45□□□□□ -1.86
CTK1YKL139W SLM3Q12093 417 aa3.45□□□□□ -1.86
CTK1YKL139W PRP46Q12417 451 aaPredicted RBP3.45□□□□□ -1.86
CTK1YKL139W YMR230W-AQ3E7B5 62 aa3.45□□□□□ -1.86
CTK1YKL139W RPS18AP0CX55 146 aaKnown RBP3.44□□□□□ -1.86
CTK1YKL139W RPS18BP0CX56 146 aaPredicted RBP3.44□□□□□ -1.86
CTK1YKL139W DAL2P25335 343 aa3.44□□□□□ -1.86
CTK1YKL139W RFS1P38234 210 aaKnown RBP3.44□□□□□ -1.86
CTK1YKL139W YAT2P40017 923 aa3.44□□□□□ -1.86
CTK1YKL139W YFL040WP43562 540 aa3.44□□□□□ -1.86
CTK1YKL139W AGX1P43567 385 aa3.44□□□□□ -1.86
CTK1YKL139W FMP33P46998 180 aa3.44□□□□□ -1.86
CTK1YKL139W YGL242CP53066 181 aa3.44□□□□□ -1.86
CTK1YKL139W SHE10P53075 577 aa3.44□□□□□ -1.86
CTK1YKL139W SHY1P53266 389 aa3.44□□□□□ -1.86
CTK1YKL139W IRC4Q03036 179 aa3.44□□□□□ -1.86
CTK1YKL139W TRM82Q03774 444 aa3.44□□□□□ -1.86
CTK1YKL139W DDC1Q08949 612 aa3.44□□□□□ -1.86
CTK1YKL139W RPN6Q12377 434 aa3.44□□□□□ -1.86
CTK1YKL139W SAL1D6W196 494 aa3.43□□□□□ -1.86
CTK1YKL139W SPT15P13393 240 aaKnown RBP3.43□□□□□ -1.86
CTK1YKL139W MEI5P32489 222 aa3.43□□□□□ -1.86
CTK1YKL139W ZRT1P32804 376 aa3.43□□□□□ -1.86
CTK1YKL139W HIS2P38635 335 aa3.43□□□□□ -1.86
CTK1YKL139W PET100P38958 111 aa3.43□□□□□ -1.86
CTK1YKL139W PTI1P39927 425 aaPredicted RBP3.43□□□□□ -1.86
CTK1YKL139W PAN6P40459 309 aa3.43□□□□□ -1.86
CTK1YKL139W YFR057WP43625 151 aa3.43□□□□□ -1.86
CTK1YKL139W NUP84P52891 726 aa3.43□□□□□ -1.86
CTK1YKL139W SEH1P53011 349 aaKnown RBP3.43□□□□□ -1.86
CTK1YKL139W CLD1P53264 445 aa3.43□□□□□ -1.86
CTK1YKL139W HCH1P53834 153 aa3.43□□□□□ -1.86
CTK1YKL139W YHC1Q05900 231 aaKnown RBP3.43□□□□□ -1.86
CTK1YKL139W HRI1Q05905 244 aaKnown RBP3.43□□□□□ -1.86
CTK1YKL139W FRE8Q12209 686 aa3.43□□□□□ -1.86
CTK1YKL139W IZH2Q12442 317 aa3.43□□□□□ -1.86
CTK1YKL139W RPL24AP04449 155 aaKnown RBP3.42□□□□□ -1.86
CTK1YKL139W RPS14AP06367 137 aaKnown RBP3.42□□□□□ -1.86
CTK1YKL139W RPB5P20434 215 aa3.42□□□□□ -1.86
CTK1YKL139W NAM9P27929 486 aa3.42□□□□□ -1.86
CTK1YKL139W SWD2P36104 329 aaPredicted RBP3.42□□□□□ -1.86
CTK1YKL139W RCK2P38623 610 aa3.42□□□□□ -1.86
CTK1YKL139W CTM1P38818 585 aa3.42□□□□□ -1.86
CTK1YKL139W RPS14BP39516 138 aaKnown RBP3.42□□□□□ -1.86
CTK1YKL139W HEM14P40012 539 aa3.42□□□□□ -1.86
CTK1YKL139W YNL208WP40159 199 aaKnown RBP3.42□□□□□ -1.86
CTK1YKL139W SLM1P40485 686 aa3.42□□□□□ -1.86
CTK1YKL139W REE1P40893 198 aa3.42□□□□□ -1.86
CTK1YKL139W BNS1P50084 137 aa3.42□□□□□ -1.86
CTK1YKL139W KEL2P50090 882 aa3.42□□□□□ -1.86
CTK1YKL139W CWC22P53333 577 aaKnown RBP3.42□□□□□ -1.86
CTK1YKL139W SPP2Q02521 185 aa3.42□□□□□ -1.86
CTK1YKL139W RNH1Q04740 348 aa3.42□□□□□ -1.86
CTK1YKL139W APC9Q12107 265 aa3.42□□□□□ -1.86
CTK1YKL139W YOL107WQ12239 342 aa3.42□□□□□ -1.86
CTK1YKL139W FRS2P15625 503 aaKnown RBP3.42□□□□□ -1.86
CTK1YKL139W PET123P17558 318 aa3.42□□□□□ -1.86
CTK1YKL139W PMT2P31382 759 aa3.42□□□□□ -1.86
CTK1YKL139W IME2P32581 645 aa3.42□□□□□ -1.86
CTK1YKL139W ANR2P36090 516 aaPredicted RBP3.42□□□□□ -1.86
CTK1YKL139W SPT8P38915 602 aa3.42□□□□□ -1.86
CTK1YKL139W BIR1P47134 954 aa3.42□□□□□ -1.86
CTK1YKL139W CRH1P53301 507 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms