RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W MAK3Q03503 176 aa4.67□□□□□ -1.66
MSH1YHR120W YPR174CQ06616 221 aaPredicted RBP4.67□□□□□ -1.66
MSH1YHR120W RAX1Q08760 435 aa4.67□□□□□ -1.66
MSH1YHR120W TPO4Q12256 659 aa4.67□□□□□ -1.66
MSH1YHR120W YOR019WQ99248 730 aa4.67□□□□□ -1.66
MSH1YHR120W SAM35P14693 329 aa4.67□□□□□ -1.66
MSH1YHR120W APN1P22936 367 aa4.67□□□□□ -1.66
MSH1YHR120W SBA1P28707 216 aaKnown RBP4.67□□□□□ -1.66
MSH1YHR120W YKE4P40544 346 aa4.67□□□□□ -1.66
MSH1YHR120W MPC1P53157 130 aaKnown RBP4.67□□□□□ -1.66
MSH1YHR120W RHO4Q00246 291 aa4.67□□□□□ -1.66
MSH1YHR120W YMR210WQ03649 449 aa4.67□□□□□ -1.66
MSH1YHR120W SWA2Q06677 668 aa4.67□□□□□ -1.66
MSH1YHR120W SFG1Q12507 346 aa4.67□□□□□ -1.66
MSH1YHR120W ADE5,7P07244 802 aaKnown RBP4.66□□□□□ -1.66
MSH1YHR120W DIT1P21623 536 aa4.66□□□□□ -1.66
MSH1YHR120W YCR016WP25617 290 aaKnown RBP4.66□□□□□ -1.66
MSH1YHR120W NAM9P27929 486 aa4.66□□□□□ -1.66
MSH1YHR120W SEA4P38164 1038 aa4.66□□□□□ -1.66
MSH1YHR120W AIM2P39721 246 aa4.66□□□□□ -1.66
MSH1YHR120W GIP2P40036 548 aa4.66□□□□□ -1.66
MSH1YHR120W QDR2P40474 542 aa4.66□□□□□ -1.66
MSH1YHR120W YGR201CP42936 225 aa4.66□□□□□ -1.66
MSH1YHR120W MAL11P53048 616 aa4.66□□□□□ -1.66
MSH1YHR120W YGL260WP53056 76 aa4.66□□□□□ -1.66
MSH1YHR120W YSA1Q01976 231 aa4.66□□□□□ -1.66
MSH1YHR120W MRPL13Q02204 264 aa4.66□□□□□ -1.66
MSH1YHR120W NUP116Q02630 1113 aa4.66□□□□□ -1.66
MSH1YHR120W RGC1Q06108 1083 aaKnown RBP4.66□□□□□ -1.66
MSH1YHR120W PHO92Q06390 306 aa4.66□□□□□ -1.66
MSH1YHR120W YTM1Q12024 460 aaPredicted RBP4.66□□□□□ -1.66
MSH1YHR120W BSC1Q12140 328 aa4.66□□□□□ -1.66
MSH1YHR120W NAR1P23503 491 aaKnown RBP4.66□□□□□ -1.66
MSH1YHR120W ARO7P32178 256 aa4.66□□□□□ -1.66
MSH1YHR120W HIS7P33734 552 aaKnown RBP4.66□□□□□ -1.66
MSH1YHR120W DHR2P36009 735 aaPredicted RBP4.66□□□□□ -1.66
MSH1YHR120W SNM1P40993 198 aa4.66□□□□□ -1.66
MSH1YHR120W GDS1P41913 522 aa4.66□□□□□ -1.66
MSH1YHR120W MDV1P47025 714 aa4.66□□□□□ -1.66
MSH1YHR120W CDH1P53197 566 aa4.66□□□□□ -1.66
MSH1YHR120W YGR067CP53243 804 aa4.66□□□□□ -1.66
MSH1YHR120W YEH1Q07804 573 aa4.66□□□□□ -1.66
MSH1YHR120W TMS1Q12116 473 aa4.66□□□□□ -1.66
MSH1YHR120W BAG7Q12128 409 aa4.66□□□□□ -1.66
MSH1YHR120W RPC40P07703 335 aaKnown RBP4.65□□□□□ -1.66
MSH1YHR120W YKL063CP35725 167 aa4.65□□□□□ -1.66
MSH1YHR120W CHA4P43634 648 aa4.65□□□□□ -1.66
MSH1YHR120W SNX4P47057 423 aa4.65□□□□□ -1.66
MSH1YHR120W YMR087WQ04299 284 aa4.65□□□□□ -1.66
MSH1YHR120W ASR1Q06834 288 aa4.65□□□□□ -1.66
MSH1YHR120W TRA1P38811 3744 aa4.65□□□□□ -1.67
MSH1YHR120W IPP1P00817 287 aaKnown RBP4.65□□□□□ -1.67
MSH1YHR120W SIR3P06701 978 aa4.65□□□□□ -1.67
MSH1YHR120W ASF2P32448 525 aaPredicted RBP4.65□□□□□ -1.67
MSH1YHR120W MSN2P33748 704 aa4.65□□□□□ -1.67
MSH1YHR120W SBE22P38814 852 aa4.65□□□□□ -1.67
MSH1YHR120W NVJ1P38881 321 aa4.65□□□□□ -1.67
MSH1YHR120W MNN5P46982 586 aa4.65□□□□□ -1.67
MSH1YHR120W DIE2P50076 525 aa4.65□□□□□ -1.67
MSH1YHR120W SPT20P50875 604 aa4.65□□□□□ -1.67
MSH1YHR120W HOS2P53096 452 aaPredicted RBP4.65□□□□□ -1.67
MSH1YHR120W NUP53Q03790 475 aa4.65□□□□□ -1.67
MSH1YHR120W FIN1Q03898 291 aa4.65□□□□□ -1.67
MSH1YHR120W YKL033W-AQ86ZR7 236 aa4.65□□□□□ -1.67
MSH1YHR120W MER1P16523 270 aa4.64□□□□□ -1.67
MSH1YHR120W GSH1P32477 678 aa4.64□□□□□ -1.67
MSH1YHR120W KAE1P36132 386 aa4.64□□□□□ -1.67
MSH1YHR120W SCO2P38072 301 aa4.64□□□□□ -1.67
MSH1YHR120W ATG14P38270 344 aa4.64□□□□□ -1.67
MSH1YHR120W TRR2P38816 342 aa4.64□□□□□ -1.67
MSH1YHR120W SNO3P43544 222 aa4.64□□□□□ -1.67
MSH1YHR120W ALB1P47019 175 aaPredicted RBP4.64□□□□□ -1.67
MSH1YHR120W YMR310CQ04867 317 aaPredicted RBP4.64□□□□□ -1.67
MSH1YHR120W REX3Q12090 404 aa4.64□□□□□ -1.67
MSH1YHR120W CYC1P00044 109 aaPredicted RBP4.64□□□□□ -1.67
MSH1YHR120W PDE2P06776 526 aa4.64□□□□□ -1.67
MSH1YHR120W ADH7P25377 361 aa4.64□□□□□ -1.67
MSH1YHR120W YCR102CP25608 368 aa4.64□□□□□ -1.67
MSH1YHR120W YIM1P28625 365 aa4.64□□□□□ -1.67
MSH1YHR120W SUR1P33300 382 aa4.64□□□□□ -1.67
MSH1YHR120W TOD6P34219 525 aa4.64□□□□□ -1.67
MSH1YHR120W LYS12P40495 371 aaKnown RBP4.64□□□□□ -1.67
MSH1YHR120W AAD14P42884 376 aa4.64□□□□□ -1.67
MSH1YHR120W YJR115WP47152 169 aa4.64□□□□□ -1.67
MSH1YHR120W YLR036CQ07986 203 aa4.64□□□□□ -1.67
MSH1YHR120W PEX27Q08580 376 aa4.64□□□□□ -1.67
MSH1YHR120W YOR376WQ08900 122 aa4.64□□□□□ -1.67
MSH1YHR120W RTR2Q12378 196 aa4.64□□□□□ -1.67
MSH1YHR120W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
MSH1YHR120W SEN2P16658 377 aa4.63□□□□□ -1.67
MSH1YHR120W RPB5P20434 215 aa4.63□□□□□ -1.67
MSH1YHR120W BUD5P25300 642 aaPredicted RBP4.63□□□□□ -1.67
MSH1YHR120W RER1P25560 188 aa4.63□□□□□ -1.67
MSH1YHR120W LHP1P33399 275 aaKnown RBP4.63□□□□□ -1.67
MSH1YHR120W NIC96P34077 839 aa4.63□□□□□ -1.67
MSH1YHR120W BET3P36149 193 aa4.63□□□□□ -1.67
MSH1YHR120W YHR177WP38867 453 aa4.63□□□□□ -1.67
MSH1YHR120W CTF8P38877 133 aa4.63□□□□□ -1.67
MSH1YHR120W MDM31P38880 579 aa4.63□□□□□ -1.67
MSH1YHR120W MIT1P40002 666 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms