RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	SPC34	P36131	295 aa		4.61	□□□□□ -1.67
APL6	YGR261C	ARA1	P38115	344 aa		4.61	□□□□□ -1.67
APL6	YGR261C	PRS3	P38689	320 aa	Known RBP	4.61	□□□□□ -1.67
APL6	YGR261C	QNS1	P38795	714 aa	Known RBP	4.61	□□□□□ -1.67
APL6	YGR261C	SNL1	P40548	159 aa		4.61	□□□□□ -1.67
APL6	YGR261C	GUF1	P46943	645 aa		4.61	□□□□□ -1.67
APL6	YGR261C	MGA1	P53050	456 aa		4.61	□□□□□ -1.67
APL6	YGR261C	SED5	Q01590	340 aa		4.61	□□□□□ -1.67
APL6	YGR261C	YKR011C	Q02209	353 aa		4.61	□□□□□ -1.67
APL6	YGR261C	CSN9	Q03981	162 aa		4.61	□□□□□ -1.67
APL6	YGR261C	PLB3	Q08108	686 aa		4.61	□□□□□ -1.67
APL6	YGR261C	RRP40	Q08285	240 aa	Known RBP	4.61	□□□□□ -1.67
APL6	YGR261C	PEX27	Q08580	376 aa		4.61	□□□□□ -1.67
APL6	YGR261C	PRS5	Q12265	496 aa	Known RBP	4.61	□□□□□ -1.67
APL6	YGR261C	NCA2	Q12374	616 aa		4.61	□□□□□ -1.67
APL6	YGR261C	ADE5,7	P07244	802 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	MET2	P08465	486 aa		4.6	□□□□□ -1.67
APL6	YGR261C	GPA2	P10823	449 aa		4.6	□□□□□ -1.67
APL6	YGR261C	CUP2	P15315	225 aa		4.6	□□□□□ -1.67
APL6	YGR261C	SCL1	P21243	252 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	IDP1	P21954	428 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	ELO2	P25358	347 aa		4.6	□□□□□ -1.67
APL6	YGR261C	FUB1	P25659	250 aa		4.6	□□□□□ -1.67
APL6	YGR261C	TFC1	P32367	649 aa		4.6	□□□□□ -1.67
APL6	YGR261C	GSH1	P32477	678 aa		4.6	□□□□□ -1.67
APL6	YGR261C	IES6	P32617	166 aa		4.6	□□□□□ -1.67
APL6	YGR261C	DRE2	P36152	348 aa		4.6	□□□□□ -1.67
APL6	YGR261C	CIN4	P39110	191 aa		4.6	□□□□□ -1.67
APL6	YGR261C	YAR028W	P39548	234 aa		4.6	□□□□□ -1.67
APL6	YGR261C	VPS52	P39904	641 aa		4.6	□□□□□ -1.67
APL6	YGR261C	YPT32	P51996	222 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	BIO4	P53630	237 aa		4.6	□□□□□ -1.67
APL6	YGR261C	AAT1	Q01802	451 aa		4.6	□□□□□ -1.67
APL6	YGR261C	NRG1	Q03125	231 aa		4.6	□□□□□ -1.67
APL6	YGR261C	COQ11	Q05892	277 aa		4.6	□□□□□ -1.67
APL6	YGR261C	TPO3	Q06451	622 aa		4.6	□□□□□ -1.67
APL6	YGR261C	MRX9	Q07349	420 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	RGT2	Q12300	763 aa		4.6	□□□□□ -1.67
APL6	YGR261C	POM34	Q12445	299 aa		4.6	□□□□□ -1.67
APL6	YGR261C	YPR1	Q12458	312 aa		4.6	□□□□□ -1.67
APL6	YGR261C	RPP0	P05317	312 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	CHO1	P08456	276 aa		4.6	□□□□□ -1.67
APL6	YGR261C	PRE7	P23724	241 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	UGX2	P32772	223 aa		4.6	□□□□□ -1.67
APL6	YGR261C	LHP1	P33399	275 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	YBR144C	P34215	104 aa		4.6	□□□□□ -1.67
APL6	YGR261C	MRX3	P38172	270 aa		4.6	□□□□□ -1.67
APL6	YGR261C	AIM2	P39721	246 aa		4.6	□□□□□ -1.67
APL6	YGR261C	COG3	P40094	801 aa		4.6	□□□□□ -1.67
APL6	YGR261C	SWP82	P43554	623 aa		4.6	□□□□□ -1.67
APL6	YGR261C	RPN11	P43588	306 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	TRS85	P46944	698 aa		4.6	□□□□□ -1.67
APL6	YGR261C	PHO86	P46956	311 aa		4.6	□□□□□ -1.67
APL6	YGR261C	YJR030C	P47101	745 aa		4.6	□□□□□ -1.67
APL6	YGR261C	UFD1	P53044	361 aa		4.6	□□□□□ -1.67
APL6	YGR261C	COS12	P53053	380 aa		4.6	□□□□□ -1.67
APL6	YGR261C	IMP4	P53941	290 aa	Known RBP	4.6	□□□□□ -1.67
APL6	YGR261C	YMR279C	Q03263	540 aa		4.6	□□□□□ -1.67
APL6	YGR261C	SIA1	Q12212	622 aa		4.6	□□□□□ -1.67
APL6	YGR261C	YOR114W	Q12219	294 aa		4.6	□□□□□ -1.67
APL6	YGR261C	RPL31B	P0C2H9	113 aa	Known RBP	4.59	□□□□□ -1.67
APL6	YGR261C	ART10	P18634	518 aa	Known RBP	4.59	□□□□□ -1.67
APL6	YGR261C	ACH1	P32316	526 aa		4.59	□□□□□ -1.67
APL6	YGR261C	REC114	P32841	428 aa		4.59	□□□□□ -1.67
APL6	YGR261C	QDR3	P38227	689 aa		4.59	□□□□□ -1.67
APL6	YGR261C	ARO9	P38840	513 aa	Predicted RBP	4.59	□□□□□ -1.67
APL6	YGR261C	CRG1	P38892	291 aa	RIP-Chip data	4.59	□□□□□ -1.67	not detected
APL6	YGR261C	DDI1	P40087	428 aa		4.59	□□□□□ -1.67
APL6	YGR261C	PFA3	P42836	336 aa		4.59	□□□□□ -1.67
APL6	YGR261C	AIM24	P47127	394 aa		4.59	□□□□□ -1.67
APL6	YGR261C	NRK1	P53915	240 aa		4.59	□□□□□ -1.67
APL6	YGR261C	RSM23	Q01163	450 aa		4.59	□□□□□ -1.67
APL6	YGR261C	ABF2	Q02486	183 aa		4.59	□□□□□ -1.67
APL6	YGR261C	OST6	Q03723	332 aa		4.59	□□□□□ -1.67
APL6	YGR261C	PRM6	Q04705	352 aa		4.59	□□□□□ -1.67
APL6	YGR261C	MDM30	Q05930	598 aa		4.59	□□□□□ -1.67
APL6	YGR261C	RSA3	Q05942	220 aa	Known RBP	4.59	□□□□□ -1.67
APL6	YGR261C	RGC1	Q06108	1083 aa	Known RBP	4.59	□□□□□ -1.67
APL6	YGR261C	SAM4	Q08985	325 aa	Known RBP	4.59	□□□□□ -1.67
APL6	YGR261C	JLP1	Q12358	412 aa		4.59	□□□□□ -1.67
APL6	YGR261C	YLL053C	P0CD98	152 aa		4.58	□□□□□ -1.68
APL6	YGR261C	MCK1	P21965	375 aa	Known RBP	4.58	□□□□□ -1.68
APL6	YGR261C	FEN2	P25621	512 aa	Known RBP	4.58	□□□□□ -1.68
APL6	YGR261C	IMD2	P38697	523 aa	Known RBP	4.58	□□□□□ -1.68
APL6	YGR261C	NPT1	P39683	429 aa	Known RBP	4.58	□□□□□ -1.68
APL6	YGR261C	DLD3	P39976	496 aa	Known RBP	4.58	□□□□□ -1.68
APL6	YGR261C	MRPL49	P40858	161 aa	Predicted RBP	4.58	□□□□□ -1.68
APL6	YGR261C	RHO3	Q00245	231 aa	Known RBP	4.58	□□□□□ -1.68
APL6	YGR261C	ELP3	Q02908	557 aa	Known RBP	4.58	□□□□□ -1.68
APL6	YGR261C	PLB2	Q03674	706 aa		4.58	□□□□□ -1.68
APL6	YGR261C	YPR196W	Q06595	470 aa		4.58	□□□□□ -1.68
APL6	YGR261C	SGT1	Q08446	395 aa		4.58	□□□□□ -1.68
APL6	YGR261C	HNT3	Q08702	217 aa		4.58	□□□□□ -1.68
APL6	YGR261C	AIM41	Q12032	185 aa		4.58	□□□□□ -1.68
APL6	YGR261C	RDI1	Q12434	202 aa		4.58	□□□□□ -1.68
APL6	YGR261C	EDE1	P34216	1381 aa		4.58	□□□□□ -1.68
APL6	YGR261C	TAF2	P23255	1407 aa		4.58	□□□□□ -1.68
APL6	YGR261C	AAC1	P04710	309 aa		4.58	□□□□□ -1.68
APL6	YGR261C	RPP1A	P05318	106 aa	Predicted RBP	4.58	□□□□□ -1.68
APL6	YGR261C	RGT1	P32862	1170 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms