RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W NUP2P32499 720 aa2.07□□□□□ -2.08
CBF2YGR140W OAR1P35731 278 aa2.07□□□□□ -2.08
CBF2YGR140W PRS4P38063 326 aaPredicted RBP2.07□□□□□ -2.08
CBF2YGR140W ECM8P38246 354 aa2.07□□□□□ -2.08
CBF2YGR140W IST2P38250 946 aa2.07□□□□□ -2.08
CBF2YGR140W MTC6P38849 526 aa2.07□□□□□ -2.08
CBF2YGR140W EFM5P53200 248 aaKnown RBP2.07□□□□□ -2.08
CBF2YGR140W SWC4P53201 476 aa2.07□□□□□ -2.08
CBF2YGR140W CPD1P53314 239 aa2.07□□□□□ -2.08
CBF2YGR140W ESBP6P53918 673 aa2.07□□□□□ -2.08
CBF2YGR140W IDP3P53982 420 aaKnown RBP2.07□□□□□ -2.08
CBF2YGR140W YPL077CQ02831 240 aa2.07□□□□□ -2.08
CBF2YGR140W RLI1Q03195 608 aaKnown RBP2.07□□□□□ -2.08
CBF2YGR140W PRM6Q04705 352 aa2.07□□□□□ -2.08
CBF2YGR140W YEH2Q07950 538 aa2.07□□□□□ -2.08
CBF2YGR140W AFT2Q08957 416 aa2.07□□□□□ -2.08
CBF2YGR140W ATG31Q12421 196 aa2.07□□□□□ -2.08
CBF2YGR140W RAD1P06777 1100 aa2.07□□□□□ -2.08
CBF2YGR140W MATALPHA2P0CY08 210 aa2.07□□□□□ -2.08
CBF2YGR140W HMLALPHA2P0CY09 210 aa2.07□□□□□ -2.08
CBF2YGR140W CTA1P15202 515 aa2.07□□□□□ -2.08
CBF2YGR140W SLY1P22213 666 aa2.07□□□□□ -2.08
CBF2YGR140W RNA15P25299 296 aaPredicted RBP2.07□□□□□ -2.08
CBF2YGR140W DCC1P25559 380 aa2.07□□□□□ -2.08
CBF2YGR140W KAR9P32526 644 aa2.07□□□□□ -2.08
CBF2YGR140W ELM1P32801 640 aa2.07□□□□□ -2.08
CBF2YGR140W TIR2P33890 251 aa2.07□□□□□ -2.08
CBF2YGR140W DTR1P38125 572 aa2.07□□□□□ -2.08
CBF2YGR140W YHR035WP38769 630 aa2.07□□□□□ -2.08
CBF2YGR140W PFS1P38872 237 aa2.07□□□□□ -2.08
CBF2YGR140W COX14P39103 70 aa2.07□□□□□ -2.08
CBF2YGR140W THO1P40040 218 aaKnown RBP2.07□□□□□ -2.08
CBF2YGR140W YGR210CP42942 411 aa2.07□□□□□ -2.08
CBF2YGR140W TOS2P50078 622 aa2.07□□□□□ -2.08
CBF2YGR140W ENT5Q03769 411 aaKnown RBP2.07□□□□□ -2.08
CBF2YGR140W KRE28Q04431 385 aa2.07□□□□□ -2.08
CBF2YGR140W CSM3Q04659 317 aa2.07□□□□□ -2.08
CBF2YGR140W GRS2Q06817 618 aa2.07□□□□□ -2.08
CBF2YGR140W SNX3Q08826 162 aaKnown RBP2.07□□□□□ -2.08
CBF2YGR140W HMS1Q12398 434 aa2.07□□□□□ -2.08
CBF2YGR140W PCL9Q12477 304 aa2.07□□□□□ -2.08
CBF2YGR140W RHO1P06780 209 aaKnown RBP2.06□□□□□ -2.08
CBF2YGR140W CAP2P13517 287 aa2.06□□□□□ -2.08
CBF2YGR140W EXG1P23776 448 aaKnown RBP2.06□□□□□ -2.08
CBF2YGR140W RPL16BP26785 198 aaKnown RBP2.06□□□□□ -2.08
CBF2YGR140W IES6P32617 166 aa2.06□□□□□ -2.08
CBF2YGR140W DDI1P40087 428 aa2.06□□□□□ -2.08
CBF2YGR140W ALG8P40351 577 aa2.06□□□□□ -2.08
CBF2YGR140W YIR014WP40570 242 aa2.06□□□□□ -2.08
CBF2YGR140W YRB1P41920 201 aaKnown RBP2.06□□□□□ -2.08
CBF2YGR140W BCH1Q05029 724 aa2.06□□□□□ -2.08
CBF2YGR140W YMR034CQ05131 434 aaPredicted RBP2.06□□□□□ -2.08
CBF2YGR140W RTT103Q05543 409 aa2.06□□□□□ -2.08
CBF2YGR140W CTR3Q06686 241 aa2.06□□□□□ -2.08
CBF2YGR140W SDO1Q07953 250 aaKnown RBP2.06□□□□□ -2.08
CBF2YGR140W BSC1Q12140 328 aa2.06□□□□□ -2.08
CBF2YGR140W MSH5Q12175 901 aa2.06□□□□□ -2.08
CBF2YGR140W UTP23Q12339 254 aaKnown RBP2.06□□□□□ -2.08
CBF2YGR140W EAF3Q12432 401 aa2.06□□□□□ -2.08
CBF2YGR140W CDC33P07260 213 aaKnown RBP2.06□□□□□ -2.08
CBF2YGR140W ERD1P16151 362 aa2.06□□□□□ -2.08
CBF2YGR140W CBF1P17106 351 aa2.06□□□□□ -2.08
CBF2YGR140W IDH1P28834 360 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
CBF2YGR140W GLC7P32598 312 aaKnown RBP2.06□□□□□ -2.08
CBF2YGR140W TRS65P32893 560 aa2.06□□□□□ -2.08
CBF2YGR140W PTR2P32901 601 aa2.06□□□□□ -2.08
CBF2YGR140W PPZ2P33329 710 aa2.06□□□□□ -2.08
CBF2YGR140W LOS1P33418 1100 aaPredicted RBP2.06□□□□□ -2.08
CBF2YGR140W SBE22P38814 852 aa2.06□□□□□ -2.08
CBF2YGR140W FLO5P38894 1075 aa2.06□□□□□ -2.08
CBF2YGR140W SIM1P40472 476 aa2.06□□□□□ -2.08
CBF2YGR140W YIL029CP40538 142 aa2.06□□□□□ -2.08
CBF2YGR140W YAR1P46683 200 aa2.06□□□□□ -2.08
CBF2YGR140W BIO3P50277 480 aa2.06□□□□□ -2.08
CBF2YGR140W AVT4P50944 713 aa2.06□□□□□ -2.08
CBF2YGR140W IRC10Q08118 586 aa2.06□□□□□ -2.08
CBF2YGR140W ALE1Q08548 619 aa2.06□□□□□ -2.08
CBF2YGR140W YLR108CQ12259 485 aa2.06□□□□□ -2.08
CBF2YGR140W CSR2Q12734 1121 aa2.06□□□□□ -2.08
CBF2YGR140W SSC1P0CS90 654 aaKnown RBP2.05□□□□□ -2.08
CBF2YGR140W VMA6P32366 345 aaKnown RBP2.05□□□□□ -2.08
CBF2YGR140W MKK1P32490 508 aa2.05□□□□□ -2.08
CBF2YGR140W PRP18P33411 251 aaPredicted RBP2.05□□□□□ -2.08
CBF2YGR140W YKL063CP35725 167 aa2.05□□□□□ -2.08
CBF2YGR140W CBT1P36038 271 aaPredicted RBP2.05□□□□□ -2.08
CBF2YGR140W RIB5P38145 238 aa2.05□□□□□ -2.08
CBF2YGR140W MOH1P38191 138 aa2.05□□□□□ -2.08
CBF2YGR140W MIC12P38341 106 aa2.05□□□□□ -2.08
CBF2YGR140W MAM33P40513 266 aa2.05□□□□□ -2.08
CBF2YGR140W YIR016WP40572 265 aa2.05□□□□□ -2.08
CBF2YGR140W IDP2P41939 412 aa2.05□□□□□ -2.08
CBF2YGR140W LSG1P53145 640 aaKnown RBP2.05□□□□□ -2.08
CBF2YGR140W ZRG17P53735 605 aa2.05□□□□□ -2.08
CBF2YGR140W PIR3Q03180 325 aa2.05□□□□□ -2.08
CBF2YGR140W BNA5Q05979 453 aa2.05□□□□□ -2.08
CBF2YGR140W DDC1Q08949 612 aa2.05□□□□□ -2.08
CBF2YGR140W TMS1Q12116 473 aa2.05□□□□□ -2.08
CBF2YGR140W CRC1Q12289 327 aa2.05□□□□□ -2.08
CBF2YGR140W RAD9P14737 1309 aa2.05□□□□□ -2.08
CBF2YGR140W PIS1P06197 220 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms