RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	FRT2	P39734	528 aa		2.71	□□□□□ -1.98
VMA7	YGR020C	MOB2	P43563	287 aa		2.71	□□□□□ -1.98
VMA7	YGR020C	EFM3	P47163	339 aa		2.71	□□□□□ -1.98
VMA7	YGR020C	YNR068C	P53754	272 aa		2.71	□□□□□ -1.98
VMA7	YGR020C	EOS1	P53938	366 aa		2.71	□□□□□ -1.98
VMA7	YGR020C	SMP3	Q04174	516 aa		2.71	□□□□□ -1.98
VMA7	YGR020C	AIM45	Q12480	344 aa	Known RBP	2.71	□□□□□ -1.98
VMA7	YGR020C	GRR1	P24814	1151 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	RCK2	P38623	610 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	ATG7	P38862	630 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	GGC1	P38988	300 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	HST4	P53688	370 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	SUR7	P54003	302 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	SED5	Q01590	340 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	UTP6	Q02354	440 aa	Known RBP	2.7	□□□□□ -1.98
VMA7	YGR020C	SKS1	Q12505	502 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	YAL067W-A	Q8TGK6	75 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	AUS1	Q08409	1394 aa		2.7	□□□□□ -1.98
VMA7	YGR020C	MAS1	P10507	462 aa		2.69	□□□□□ -1.98
VMA7	YGR020C	THR4	P16120	514 aa	Known RBP	2.69	□□□□□ -1.98
VMA7	YGR020C	CKI1	P20485	582 aa		2.69	□□□□□ -1.98
VMA7	YGR020C	DBP7	P36120	742 aa	Known RBP	2.69	□□□□□ -1.98
VMA7	YGR020C	DAD2	P36162	133 aa		2.69	□□□□□ -1.98
VMA7	YGR020C	API2	Q04413	109 aa		2.69	□□□□□ -1.98
VMA7	YGR020C	MRX8	Q05473	314 aa		2.69	□□□□□ -1.98
VMA7	YGR020C	YPR195C	Q06594	109 aa		2.69	□□□□□ -1.98
VMA7	YGR020C	GLE1	Q12315	538 aa		2.69	□□□□□ -1.98
VMA7	YGR020C	SFG1	Q12507	346 aa		2.69	□□□□□ -1.98
VMA7	YGR020C	BGL2	P15703	313 aa	Known RBP	2.68	□□□□□ -1.98
VMA7	YGR020C	FUS3	P16892	353 aa	Known RBP	2.68	□□□□□ -1.98
VMA7	YGR020C	URA10	P30402	227 aa		2.68	□□□□□ -1.98
VMA7	YGR020C	PTK1	P36002	662 aa	Predicted RBP	2.68	□□□□□ -1.98
VMA7	YGR020C	PRY2	P36110	329 aa		2.68	□□□□□ -1.98
VMA7	YGR020C	YIR035C	P40579	254 aa		2.68	□□□□□ -1.98
VMA7	YGR020C	YNL320W	P42840	284 aa		2.68	□□□□□ -1.98
VMA7	YGR020C	YMR310C	Q04867	317 aa	Predicted RBP	2.68	□□□□□ -1.98
VMA7	YGR020C	YOL029C	Q08187	201 aa		2.68	□□□□□ -1.98
VMA7	YGR020C	ALE1	Q08548	619 aa		2.68	□□□□□ -1.98
VMA7	YGR020C	YOR012W	Q12351	137 aa		2.68	□□□□□ -1.98
VMA7	YGR020C	FRE6	Q12473	712 aa		2.68	□□□□□ -1.98
VMA7	YGR020C	BI3	Q9ZZW7	517 aa		2.68	□□□□□ -1.98
VMA7	YGR020C	ARF2	P19146	181 aa	Known RBP	2.67	□□□□□ -1.98
VMA7	YGR020C	RDS1	P25611	832 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	HMX1	P32339	317 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	RAD23	P32628	398 aa	Known RBP	2.67	□□□□□ -1.98
VMA7	YGR020C	CYM1	P32898	989 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	TRR2	P38816	342 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	SCS7	Q03529	384 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	RCF1	Q03713	159 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	NAT4	Q04751	285 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	APC5	Q08683	685 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	MMT2	Q08970	484 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	RFM1	Q12192	310 aa		2.67	□□□□□ -1.98
VMA7	YGR020C	FLO11	P08640	1367 aa		2.66	□□□□□ -1.98
VMA7	YGR020C	HSP82	P02829	709 aa	Known RBP	2.66	□□□□□ -1.98
VMA7	YGR020C	MKK1	P32490	508 aa		2.66	□□□□□ -1.98
VMA7	YGR020C	MRPS5	P33759	307 aa		2.66	□□□□□ -1.98
VMA7	YGR020C	TIP20	P33891	701 aa		2.66	□□□□□ -1.98
VMA7	YGR020C	YKL071W	P36086	256 aa		2.66	□□□□□ -1.98
VMA7	YGR020C	FRM2	P37261	193 aa		2.66	□□□□□ -1.98
VMA7	YGR020C	ADH5	P38113	351 aa	Known RBP	2.66	□□□□□ -1.98
VMA7	YGR020C	PCH2	P38126	564 aa		2.66	□□□□□ -1.98
VMA7	YGR020C	IST2	P38250	946 aa		2.66	□□□□□ -1.98
VMA7	YGR020C	RPA34	P47006	233 aa	Predicted RBP	2.66	□□□□□ -1.98
VMA7	YGR020C	LSG1	P53145	640 aa	Known RBP	2.66	□□□□□ -1.98
VMA7	YGR020C	CSM3	Q04659	317 aa		2.66	□□□□□ -1.98
VMA7	YGR020C	CKA2	P19454	339 aa		2.65	□□□□□ -1.99
VMA7	YGR020C	PHO84	P25297	587 aa	Known RBP	2.65	□□□□□ -1.99
VMA7	YGR020C	MXR2	P25566	168 aa		2.65	□□□□□ -1.99
VMA7	YGR020C	EFM1	P38732	585 aa		2.65	□□□□□ -1.99
VMA7	YGR020C	UFE1	P41834	346 aa		2.65	□□□□□ -1.99
VMA7	YGR020C	YHC3	P47040	408 aa		2.65	□□□□□ -1.99
VMA7	YGR020C	IME2	P32581	645 aa		2.64	□□□□□ -1.99
VMA7	YGR020C	SKG6	P32900	734 aa	Predicted RBP	2.64	□□□□□ -1.99
VMA7	YGR020C	YFR018C	P43599	363 aa		2.64	□□□□□ -1.99
VMA7	YGR020C	NRM1	P53718	249 aa		2.64	□□□□□ -1.99
VMA7	YGR020C	YNL143C	P53908	130 aa		2.64	□□□□□ -1.99
VMA7	YGR020C	INP2	Q03824	705 aa		2.64	□□□□□ -1.99
VMA7	YGR020C	STE3	P06783	470 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	UTR1	P21373	530 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	AST1	P35183	429 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	TAE1	P38340	232 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	YHR122W	P38829	231 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	YCH1	P42937	148 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	CPR7	P47103	393 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	ZRG17	P53735	605 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	RRB1	Q04225	511 aa	Known RBP	2.63	□□□□□ -1.99
VMA7	YGR020C	ARR1	Q06596	294 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	TAF10	Q12030	206 aa		2.63	□□□□□ -1.99
VMA7	YGR020C	SAG1	P20840	650 aa		2.62	□□□□□ -1.99
VMA7	YGR020C	AGA2	P32781	87 aa		2.62	□□□□□ -1.99
VMA7	YGR020C	LAS1	P36146	502 aa	Predicted RBP	2.62	□□□□□ -1.99
VMA7	YGR020C	NAS6	P50086	228 aa		2.62	□□□□□ -1.99
VMA7	YGR020C	UTP15	Q04305	513 aa	Known RBP	2.62	□□□□□ -1.99
VMA7	YGR020C	APC4	Q04601	652 aa		2.62	□□□□□ -1.99
VMA7	YGR020C	RPN8	Q08723	338 aa	Known RBP	2.62	□□□□□ -1.99
VMA7	YGR020C	YDR018C	Q12185	396 aa		2.62	□□□□□ -1.99
VMA7	YGR020C	RPN6	Q12377	434 aa		2.62	□□□□□ -1.99
VMA7	YGR020C	NBL1	Q3E7Y6	73 aa		2.62	□□□□□ -1.99
VMA7	YGR020C	RAD1	P06777	1100 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms