RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W YPR078CQ06813 372 aa2.63□□□□□ -1.99
PRE1YER012W YLR012CQ07927 99 aa2.63□□□□□ -1.99
PRE1YER012W RMD5Q12508 421 aa2.63□□□□□ -1.99
PRE1YER012W AFI1Q99222 893 aa2.63□□□□□ -1.99
PRE1YER012W IZH4Q99393 312 aa2.63□□□□□ -1.99
PRE1YER012W MEC1P38111 2368 aa2.63□□□□□ -1.99
PRE1YER012W HIS1P00498 297 aaKnown RBP2.62□□□□□ -1.99
PRE1YER012W CYC3P06182 269 aa2.62□□□□□ -1.99
PRE1YER012W HSP26P15992 214 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
PRE1YER012W RAD57P25301 460 aa2.62□□□□□ -1.99
PRE1YER012W YCR051WP25631 222 aa2.62□□□□□ -1.99
PRE1YER012W TIP1P27654 210 aaPredicted RBP2.62□□□□□ -1.99
PRE1YER012W ERV1P27882 189 aa2.62□□□□□ -1.99
PRE1YER012W BRF1P29056 596 aa2.62□□□□□ -1.99
PRE1YER012W MEI4P29467 408 aa2.62□□□□□ -1.99
PRE1YER012W PCH2P38126 564 aa2.62□□□□□ -1.99
PRE1YER012W KAP104P38217 918 aaKnown RBP2.62□□□□□ -1.99
PRE1YER012W OTU2P38747 307 aaKnown RBP2.62□□□□□ -1.99
PRE1YER012W PRM9P39551 298 aa2.62□□□□□ -1.99
PRE1YER012W SOV1Q04748 898 aa2.62□□□□□ -1.99
PRE1YER012W ROY1Q04847 553 aa2.62□□□□□ -1.99
PRE1YER012W CMS1Q07897 291 aaKnown RBP2.62□□□□□ -1.99
PRE1YER012W SLD7Q08457 257 aa2.62□□□□□ -1.99
PRE1YER012W SRO7Q12038 1033 aa2.62□□□□□ -1.99
PRE1YER012W GPM3Q12326 303 aa2.62□□□□□ -1.99
PRE1YER012W CYR1P08678 2026 aaKnown RBP2.61□□□□□ -1.99
PRE1YER012W CLN1P20437 546 aa2.61□□□□□ -1.99
PRE1YER012W PPH21P23594 369 aa2.61□□□□□ -1.99
PRE1YER012W SPB1P25582 841 aaPredicted RBP2.61□□□□□ -1.99
PRE1YER012W URA7P28274 579 aaKnown RBP2.61□□□□□ -1.99
PRE1YER012W AFG1P32317 509 aa2.61□□□□□ -1.99
PRE1YER012W PXA2P34230 853 aa2.61□□□□□ -1.99
PRE1YER012W SRP72P38688 640 aaKnown RBP2.61□□□□□ -1.99
PRE1YER012W ZIM17P42844 174 aa2.61□□□□□ -1.99
PRE1YER012W YGR149WP48236 432 aa2.61□□□□□ -1.99
PRE1YER012W HOP2P53187 214 aa2.61□□□□□ -1.99
PRE1YER012W PEX31P53203 462 aa2.61□□□□□ -1.99
PRE1YER012W YPL113CQ02961 396 aa2.61□□□□□ -1.99
PRE1YER012W KAP95Q06142 861 aaKnown RBP2.61□□□□□ -1.99
PRE1YER012W TIM18Q08749 192 aa2.61□□□□□ -1.99
PRE1YER012W SNX3Q08826 162 aaKnown RBP2.61□□□□□ -1.99
PRE1YER012W ISA2Q12425 185 aa2.61□□□□□ -1.99
PRE1YER012W COX3P00420 269 aa2.6□□□□□ -1.99
PRE1YER012W CLB1P24868 471 aa2.6□□□□□ -1.99
PRE1YER012W SNT1P25357 1226 aa2.6□□□□□ -1.99
PRE1YER012W IDH2P28241 369 aaKnown RBP2.6□□□□□ -1.99
PRE1YER012W MRPL40P36534 297 aa2.6□□□□□ -1.99
PRE1YER012W AIM18P38884 321 aa2.6□□□□□ -1.99
PRE1YER012W SEC9P40357 651 aa2.6□□□□□ -1.99
PRE1YER012W SIM1P40472 476 aa2.6□□□□□ -1.99
PRE1YER012W YFL012WP43580 148 aa2.6□□□□□ -1.99
PRE1YER012W NUP84P52891 726 aa2.6□□□□□ -1.99
PRE1YER012W YDR387CQ04162 555 aa2.6□□□□□ -1.99
PRE1YER012W YPR114WQ06107 315 aa2.6□□□□□ -1.99
PRE1YER012W VTA1Q06263 330 aa2.6□□□□□ -1.99
PRE1YER012W APC5Q08683 685 aa2.6□□□□□ -1.99
PRE1YER012W SCH9P11792 824 aaKnown RBP2.59□□□□□ -1.99
PRE1YER012W MNE1P24720 663 aa2.59□□□□□ -1.99
PRE1YER012W RAD14P28519 371 aa2.59□□□□□ -1.99
PRE1YER012W NUP2P32499 720 aa2.59□□□□□ -1.99
PRE1YER012W YME2P32843 850 aa2.59□□□□□ -1.99
PRE1YER012W HCS1P34243 683 aa2.59□□□□□ -1.99
PRE1YER012W EFM4P40516 257 aa2.59□□□□□ -1.99
PRE1YER012W TCB2P48231 1178 aa2.59□□□□□ -1.99
PRE1YER012W SXM1Q04175 944 aaKnown RBP2.59□□□□□ -1.99
PRE1YER012W YLR456WQ06199 204 aa2.59□□□□□ -1.99
PRE1YER012W CLP1Q08685 445 aaPredicted RBP2.59□□□□□ -1.99
PRE1YER012W SMF3Q12078 473 aaPredicted RBP2.59□□□□□ -1.99
PRE1YER012W REC107P21651 314 aa2.58□□□□□ -2
PRE1YER012W YSR3P23501 404 aa2.58□□□□□ -2
PRE1YER012W DCC1P25559 380 aa2.58□□□□□ -2
PRE1YER012W HIS2P38635 335 aa2.58□□□□□ -2
PRE1YER012W SEO1P39709 593 aa2.58□□□□□ -2
PRE1YER012W LCP5P40079 357 aaPredicted RBP2.58□□□□□ -2
PRE1YER012W BUD13P46947 266 aaPredicted RBP2.58□□□□□ -2
PRE1YER012W YJR085CP47131 105 aaKnown RBP2.58□□□□□ -2
PRE1YER012W YML6P51998 286 aa2.58□□□□□ -2
PRE1YER012W SWC4P53201 476 aa2.58□□□□□ -2
PRE1YER012W VHS1Q03785 461 aa2.58□□□□□ -2
PRE1YER012W TRM12Q04235 462 aa2.58□□□□□ -2
PRE1YER012W GRX8Q05926 109 aa2.58□□□□□ -2
PRE1YER012W CUE5Q08412 411 aaKnown RBP2.58□□□□□ -2
PRE1YER012W YDR018CQ12185 396 aa2.58□□□□□ -2
PRE1YER012W EFG1Q3E705 233 aaKnown RBP2.58□□□□□ -2
PRE1YER012W YLR462WO13556 202 aa2.57□□□□□ -2
PRE1YER012W TEF1P02994 458 aaKnown RBP2.57□□□□□ -2
PRE1YER012W SPS4P09937 338 aa2.57□□□□□ -2
PRE1YER012W DAL82P21705 255 aa2.57□□□□□ -2
PRE1YER012W POP5P28005 173 aa2.57□□□□□ -2
PRE1YER012W CWP1P28319 239 aa2.57□□□□□ -2
PRE1YER012W AEP1P32493 518 aa2.57□□□□□ -2
PRE1YER012W ECM25P32525 599 aa2.57□□□□□ -2
PRE1YER012W MID2P36027 376 aa2.57□□□□□ -2
PRE1YER012W IML3P38265 245 aa2.57□□□□□ -2
PRE1YER012W YHL049CP38722 271 aa2.57□□□□□ -2
PRE1YER012W TCD1P38756 429 aa2.57□□□□□ -2
PRE1YER012W END3P39013 349 aa2.57□□□□□ -2
PRE1YER012W CCT2P39076 527 aaKnown RBP2.57□□□□□ -2
PRE1YER012W YFL064CP43540 174 aa2.57□□□□□ -2
PRE1YER012W SSN8P47821 323 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms