RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	MOD5	P07884	428 aa		11.35	□□□□□ -0.59
NPL3	YDR432W	SCO1	P23833	295 aa		11.35	□□□□□ -0.59
NPL3	YDR432W	GSH1	P32477	678 aa		11.35	□□□□□ -0.59
NPL3	YDR432W	MRPL39	P36533	70 aa		11.35	□□□□□ -0.59
NPL3	YDR432W	HOT1	Q03213	719 aa		11.35	□□□□□ -0.59
NPL3	YDR432W	BRX1	Q08235	291 aa	Known RBP	11.35	□□□□□ -0.59
NPL3	YDR432W	RDL2	Q08742	149 aa	Known RBP	11.35	□□□□□ -0.59
NPL3	YDR432W	NCE102	Q12207	173 aa	RIP-Chip data	11.35	□□□□□ -0.59	not detected
NPL3	YDR432W	SNF4	P12904	322 aa		11.34	□□□□□ -0.59
NPL3	YDR432W	RER1	P25560	188 aa		11.34	□□□□□ -0.59
NPL3	YDR432W	HIS7	P33734	552 aa	Known RBP	11.34	□□□□□ -0.59
NPL3	YDR432W	RSM22	P36056	628 aa		11.34	□□□□□ -0.59
NPL3	YDR432W	VHR1	P40522	640 aa		11.34	□□□□□ -0.59
NPL3	YDR432W	MET28	P40573	187 aa		11.34	□□□□□ -0.59
NPL3	YDR432W	RAF1	Q06891	181 aa		11.34	□□□□□ -0.59
NPL3	YDR432W	NOP12	Q08208	459 aa	Known RBP	11.34	□□□□□ -0.59
NPL3	YDR432W	SFM1	Q12314	213 aa		11.34	□□□□□ -0.59
NPL3	YDR432W	SPC34	P36131	295 aa		11.33	□□□□□ -0.6
NPL3	YDR432W	YHL012W	P38709	493 aa		11.33	□□□□□ -0.6
NPL3	YDR432W	YHL037C	P38733	133 aa		11.33	□□□□□ -0.6
NPL3	YDR432W	YHR180W	P38868	163 aa		11.33	□□□□□ -0.6
NPL3	YDR432W	COG3	P40094	801 aa		11.33	□□□□□ -0.6
NPL3	YDR432W	TOS2	P50078	622 aa		11.33	□□□□□ -0.6
NPL3	YDR432W	AVO1	Q08236	1176 aa		11.33	□□□□□ -0.6
NPL3	YDR432W	SUI3	P09064	285 aa	Known RBP	11.32	□□□□□ -0.6
NPL3	YDR432W	YCK1	P23291	538 aa		11.32	□□□□□ -0.6
NPL3	YDR432W	SLM4	P38247	162 aa		11.32	□□□□□ -0.6
NPL3	YDR432W	MED8	P38304	223 aa		11.32	□□□□□ -0.6
NPL3	YDR432W	DBP9	Q06218	594 aa	Known RBP	11.32	□□□□□ -0.6
NPL3	YDR432W	YDL109C	Q12103	647 aa		11.32	□□□□□ -0.6
NPL3	YDR432W	YOL159C-A	Q3E769	90 aa		11.32	□□□□□ -0.6
NPL3	YDR432W	PEP12	P32854	288 aa		11.31	□□□□□ -0.6
NPL3	YDR432W	HXT9	P40885	567 aa		11.31	□□□□□ -0.6
NPL3	YDR432W	SNM1	P40993	198 aa		11.31	□□□□□ -0.6
NPL3	YDR432W	AGP3	P43548	558 aa		11.31	□□□□□ -0.6
NPL3	YDR432W	YJR142W	P47173	342 aa		11.31	□□□□□ -0.6
NPL3	YDR432W	HXT11	P54862	567 aa		11.31	□□□□□ -0.6
NPL3	YDR432W	ARO10	Q06408	635 aa		11.31	□□□□□ -0.6
NPL3	YDR432W	MRL1	Q06815	381 aa		11.31	□□□□□ -0.6
NPL3	YDR432W	DTD1	Q07648	150 aa	Known RBP	11.31	□□□□□ -0.6
NPL3	YDR432W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	11.31	□□□□□ -0.6	not detected
NPL3	YDR432W	DBP10	Q12389	995 aa	Known RBP	11.31	□□□□□ -0.6
NPL3	YDR432W	TSC13	Q99190	310 aa		11.31	□□□□□ -0.6
NPL3	YDR432W	ERD2	P18414	219 aa		11.3	□□□□□ -0.6
NPL3	YDR432W	UBC8	P28263	218 aa		11.3	□□□□□ -0.6
NPL3	YDR432W	RPN2	P32565	945 aa	Known RBP	11.3	□□□□□ -0.6
NPL3	YDR432W	SWH1	P35845	1188 aa		11.3	□□□□□ -0.6
NPL3	YDR432W	GPP1	P41277	250 aa	Known RBP	11.3	□□□□□ -0.6
NPL3	YDR432W	NIT2	P47016	307 aa		11.3	□□□□□ -0.6
NPL3	YDR432W	SYF2	P53277	215 aa	Predicted RBP	11.3	□□□□□ -0.6
NPL3	YDR432W	RRN5	Q02983	363 aa		11.3	□□□□□ -0.6
NPL3	YDR432W	API2	Q04413	109 aa		11.3	□□□□□ -0.6
NPL3	YDR432W	UTP21	Q06078	939 aa	Predicted RBP	11.3	□□□□□ -0.6
NPL3	YDR432W	RHO1	P06780	209 aa	Known RBP	11.29	□□□□□ -0.6
NPL3	YDR432W	PUP2	P32379	260 aa		11.29	□□□□□ -0.6
NPL3	YDR432W	NUF2	P33895	451 aa		11.29	□□□□□ -0.6
NPL3	YDR432W	CHK1	P38147	527 aa		11.29	□□□□□ -0.6
NPL3	YDR432W	PRS3	P38689	320 aa	Known RBP	11.29	□□□□□ -0.6
NPL3	YDR432W	RRP4	P38792	359 aa	Known RBP	11.29	□□□□□ -0.6
NPL3	YDR432W	YHR097C	P38809	366 aa	Known RBP	11.29	□□□□□ -0.6
NPL3	YDR432W	LSM4	P40070	187 aa	Known RBP	11.29	□□□□□ -0.6
NPL3	YDR432W	AVT7	P40501	490 aa		11.29	□□□□□ -0.6
NPL3	YDR432W	CAK1	P43568	368 aa	Predicted RBP	11.29	□□□□□ -0.6
NPL3	YDR432W	NUP57	P48837	541 aa		11.29	□□□□□ -0.6
NPL3	YDR432W	TPS1	Q00764	495 aa	Known RBP	11.29	□□□□□ -0.6
NPL3	YDR432W	NDL1	Q06568	189 aa		11.29	□□□□□ -0.6
NPL3	YDR432W	IRC19	Q07843	230 aa		11.29	□□□□□ -0.6
NPL3	YDR432W	YDL180W	Q12301	547 aa		11.29	□□□□□ -0.6
NPL3	YDR432W	MRX4	Q12467	430 aa		11.29	□□□□□ -0.6
NPL3	YDR432W	PET9	P18239	318 aa	Known RBP	11.28	□□□□□ -0.6
NPL3	YDR432W	CLB4	P24871	460 aa		11.28	□□□□□ -0.6
NPL3	YDR432W	RFC4	P40339	323 aa	Known RBP	11.28	□□□□□ -0.6
NPL3	YDR432W	BLM10	P43583	2143 aa		11.28	□□□□□ -0.6
NPL3	YDR432W	MRPL19	P53875	158 aa		11.28	□□□□□ -0.6
NPL3	YDR432W	DMA2	P53924	522 aa		11.28	□□□□□ -0.6
NPL3	YDR432W	YDR239C	Q03780	787 aa		11.28	□□□□□ -0.6
NPL3	YDR432W	MRPL1	Q04599	285 aa		11.28	□□□□□ -0.6
NPL3	YDR432W	VBA4	Q04602	768 aa	Known RBP	11.28	□□□□□ -0.6
NPL3	YDR432W	YAL064W-B	O13512	126 aa		11.27	□□□□□ -0.61
NPL3	YDR432W	YNL195C	P40168	261 aa		11.27	□□□□□ -0.61
NPL3	YDR432W	SNL1	P40548	159 aa		11.27	□□□□□ -0.61
NPL3	YDR432W	YGR126W	P53274	230 aa		11.27	□□□□□ -0.61
NPL3	YDR432W	YMR265C	Q03508	461 aa	Known RBP	11.27	□□□□□ -0.61
NPL3	YDR432W	VIK1	Q12045	647 aa		11.27	□□□□□ -0.61
NPL3	YDR432W	YBL029C-A	Q3E756	94 aa		11.27	□□□□□ -0.61
NPL3	YDR432W	CDC4	P07834	779 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	11.26	□□□□□ -0.61	not detected
NPL3	YDR432W	APE2	P32454	952 aa	Known RBP	11.26	□□□□□ -0.61
NPL3	YDR432W	SLC1	P33333	303 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	IDP2	P41939	412 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	LYS5	P50113	272 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	MPC1	P53157	130 aa	Known RBP	11.26	□□□□□ -0.61
NPL3	YDR432W	MAL12	P53341	584 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	COQ11	Q05892	277 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	VPS36	Q06696	566 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	LOT6	Q07923	191 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	RLM1	Q12224	676 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	YLR126C	Q12288	251 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	MHF1	Q3E835	90 aa		11.26	□□□□□ -0.61
NPL3	YDR432W	ATR1	P13090	542 aa		11.25	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms