RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeast

Gene SSS1, Length 243 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSS1	YDR086C	MOB2	P43563	287 aa		0.86	□□□□□ -2.27
SSS1	YDR086C	ASG7	P46993	209 aa		0.86	□□□□□ -2.27
SSS1	YDR086C	YDR541C	Q03049	344 aa		0.86	□□□□□ -2.27
SSS1	YDR086C	PEX30	Q06169	523 aa		0.86	□□□□□ -2.27
SSS1	YDR086C	NDL1	Q06568	189 aa		0.86	□□□□□ -2.27
SSS1	YDR086C	ARR1	Q06596	294 aa		0.86	□□□□□ -2.27
SSS1	YDR086C	YDL121C	Q07541	149 aa		0.86	□□□□□ -2.27
SSS1	YDR086C	NOP6	Q07623	225 aa	Known RBP	0.86	□□□□□ -2.27
SSS1	YDR086C	RPN8	Q08723	338 aa	Known RBP	0.86	□□□□□ -2.27
SSS1	YDR086C	TDH2	P00358	332 aa	Known RBP	0.85	□□□□□ -2.27
SSS1	YDR086C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.85	□□□□□ -2.27	not detected
SSS1	YDR086C	ADK2	P26364	225 aa		0.85	□□□□□ -2.27
SSS1	YDR086C	ERV1	P27882	189 aa		0.85	□□□□□ -2.27
SSS1	YDR086C	FAD1	P38913	306 aa		0.85	□□□□□ -2.27
SSS1	YDR086C	LSM5	P40089	93 aa	Known RBP	0.85	□□□□□ -2.27
SSS1	YDR086C	YIL054W	P40524	105 aa		0.85	□□□□□ -2.27
SSS1	YDR086C	BAT2	P47176	376 aa	Known RBP	0.85	□□□□□ -2.27
SSS1	YDR086C	YPL080C	Q02826	108 aa		0.85	□□□□□ -2.27
SSS1	YDR086C	GAT3	Q07928	141 aa		0.85	□□□□□ -2.27
SSS1	YDR086C	ALE1	Q08548	619 aa		0.85	□□□□□ -2.27
SSS1	YDR086C	YOR283W	Q12040	230 aa	Known RBP	0.85	□□□□□ -2.27
SSS1	YDR086C	DFM1	Q12743	341 aa	Known RBP	0.85	□□□□□ -2.27
SSS1	YDR086C	VPS63	O13549	108 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	RPS14A	P06367	137 aa	Known RBP	0.84	□□□□□ -2.27
SSS1	YDR086C	PDE2	P06776	526 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	DAL81	P21657	970 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	URA10	P30402	227 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	ITR2	P30606	609 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	YSC83	P32792	385 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	YKL071W	P36086	256 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	IST2	P38250	946 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	TAE1	P38340	232 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	RCK1	P38622	512 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	RPS14B	P39516	138 aa	Known RBP	0.84	□□□□□ -2.27
SSS1	YDR086C	GTO3	Q04806	366 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	ECM19	Q06011	112 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	YLH47	Q06493	454 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	SHS1	Q07657	551 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	YPL264C	Q08980	353 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	UBA3	Q99344	299 aa		0.84	□□□□□ -2.27
SSS1	YDR086C	CDC31	P06704	161 aa	Known RBP	0.83	□□□□□ -2.28
SSS1	YDR086C	ADH3	P07246	375 aa	Known RBP	0.83	□□□□□ -2.28
SSS1	YDR086C	CTM1	P38818	585 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	YHR182W	P38870	785 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	RRG9	P40156	214 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	PCL7	P40186	285 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	YCH1	P42937	148 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	YFR018C	P43599	363 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	YFR045W	P43617	309 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	TCB2	P48231	1178 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	YGR111W	P53265	400 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	SUR7	P54003	302 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	SCS7	Q03529	384 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	TRM82	Q03774	444 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	ERB1	Q04660	807 aa	Known RBP	0.83	□□□□□ -2.28
SSS1	YDR086C	YDR222W	Q04925	415 aa		0.83	□□□□□ -2.28
SSS1	YDR086C	KRE1	P17260	313 aa		0.82	□□□□□ -2.28
SSS1	YDR086C	ARO4	P32449	370 aa	Known RBP	0.82	□□□□□ -2.28
SSS1	YDR086C	EFB1	P32471	206 aa	Known RBP	0.82	□□□□□ -2.28
SSS1	YDR086C	LTV1	P34078	463 aa		0.82	□□□□□ -2.28
SSS1	YDR086C	KAP104	P38217	918 aa	Known RBP	0.82	□□□□□ -2.28
SSS1	YDR086C	SRB7	P47822	140 aa		0.82	□□□□□ -2.28
SSS1	YDR086C	YNL095C	P53932	642 aa		0.82	□□□□□ -2.28
SSS1	YDR086C	MDM1	Q01846	1127 aa		0.82	□□□□□ -2.28
SSS1	YDR086C	RRB1	Q04225	511 aa	Known RBP	0.82	□□□□□ -2.28
SSS1	YDR086C	UAF30	Q08747	228 aa		0.82	□□□□□ -2.28
SSS1	YDR086C	SLM3	Q12093	417 aa		0.82	□□□□□ -2.28
SSS1	YDR086C	RRG1	Q12167	365 aa	Predicted RBP	0.82	□□□□□ -2.28
SSS1	YDR086C	MRX4	Q12467	430 aa		0.82	□□□□□ -2.28
SSS1	YDR086C	FUR1	P18562	216 aa	Known RBP	0.81	□□□□□ -2.28
SSS1	YDR086C	RPB9	P27999	122 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	VAM7	P32912	316 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	CSE1	P33307	960 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	ZRT3	P34240	503 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	PCH2	P38126	564 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	ECO1	P43605	281 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	HIT1	P46973	164 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	CAX4	P53223	239 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	INP1	Q03694	420 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	DXO1	Q06349	442 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	IPK1	Q06667	281 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	DCI1	Q08558	271 aa		0.81	□□□□□ -2.28
SSS1	YDR086C	PDX1	P16451	410 aa		0.8	□□□□□ -2.28
SSS1	YDR086C	SMF2	P38778	549 aa		0.8	□□□□□ -2.28
SSS1	YDR086C	FEX1	Q08913	375 aa		0.8	□□□□□ -2.28
SSS1	YDR086C	FEX2	Q08991	375 aa		0.8	□□□□□ -2.28
SSS1	YDR086C	IES3	Q12345	250 aa		0.8	□□□□□ -2.28
SSS1	YDR086C	SRN2	Q99176	213 aa		0.8	□□□□□ -2.28
SSS1	YDR086C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
SSS1	YDR086C	CLB6	P32943	380 aa		0.79	□□□□□ -2.28
SSS1	YDR086C	YKL187C	P34231	750 aa		0.79	□□□□□ -2.28
SSS1	YDR086C	RFT1	P38206	574 aa	Predicted RBP	0.79	□□□□□ -2.28
SSS1	YDR086C	SLM1	P40485	686 aa		0.79	□□□□□ -2.28
SSS1	YDR086C	LYS12	P40495	371 aa	Known RBP	0.79	□□□□□ -2.28
SSS1	YDR086C	YNL320W	P42840	284 aa		0.79	□□□□□ -2.28
SSS1	YDR086C	ZIM17	P42844	174 aa		0.79	□□□□□ -2.28
SSS1	YDR086C	YGL118C	P53132	145 aa		0.79	□□□□□ -2.28
SSS1	YDR086C	RMT2	Q03305	412 aa		0.79	□□□□□ -2.28
SSS1	YDR086C	INH1	P01097	85 aa		0.78	□□□□□ -2.28
SSS1	YDR086C	MED6	P38782	295 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms