RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C RPL23BP0CX42 137 aaKnown RBP3.44□□□□□ -1.86
SHU2YDR078C YKL162CP36052 402 aa3.44□□□□□ -1.86
SHU2YDR078C MMS21P38632 267 aa3.44□□□□□ -1.86
SHU2YDR078C LSM12P38828 187 aaKnown RBP3.44□□□□□ -1.86
SHU2YDR078C FET3P38993 636 aa3.44□□□□□ -1.86
SHU2YDR078C ATG18P43601 500 aa3.44□□□□□ -1.86
SHU2YDR078C BIR1P47134 954 aa3.44□□□□□ -1.86
SHU2YDR078C BNS1P50084 137 aa3.44□□□□□ -1.86
SHU2YDR078C RPN14P53196 417 aa3.44□□□□□ -1.86
SHU2YDR078C SHY1P53266 389 aa3.44□□□□□ -1.86
SHU2YDR078C CWC22P53333 577 aaKnown RBP3.44□□□□□ -1.86
SHU2YDR078C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SHU2YDR078C UBX2Q04228 584 aa3.44□□□□□ -1.86
SHU2YDR078C APC4Q04601 652 aa3.44□□□□□ -1.86
SHU2YDR078C YHC1Q05900 231 aaKnown RBP3.44□□□□□ -1.86
SHU2YDR078C SLM3Q12093 417 aa3.44□□□□□ -1.86
SHU2YDR078C RBK1P25332 333 aa3.43□□□□□ -1.86
SHU2YDR078C HXT1P32465 570 aa3.43□□□□□ -1.86
SHU2YDR078C RAD23P32628 398 aaKnown RBP3.43□□□□□ -1.86
SHU2YDR078C RPC25P35718 212 aa3.43□□□□□ -1.86
SHU2YDR078C PEX18P38855 283 aa3.43□□□□□ -1.86
SHU2YDR078C YNL208WP40159 199 aaKnown RBP3.43□□□□□ -1.86
SHU2YDR078C YGL185CP53100 379 aa3.43□□□□□ -1.86
SHU2YDR078C CRH1P53301 507 aa3.43□□□□□ -1.86
SHU2YDR078C PLP2Q12017 286 aa3.43□□□□□ -1.86
SHU2YDR078C SLF1Q12034 447 aaKnown RBP3.43□□□□□ -1.86
SHU2YDR078C HMS1Q12398 434 aa3.43□□□□□ -1.86
SHU2YDR078C YPR1Q12458 312 aa3.43□□□□□ -1.86
SHU2YDR078C RPL5P26321 297 aaKnown RBP3.42□□□□□ -1.86
SHU2YDR078C PRR1P28708 518 aa3.42□□□□□ -1.86
SHU2YDR078C YKL070WP36087 169 aa3.42□□□□□ -1.86
SHU2YDR078C YNL320WP42840 284 aa3.42□□□□□ -1.86
SHU2YDR078C GTO1P48239 356 aa3.42□□□□□ -1.86
SHU2YDR078C YGL242CP53066 181 aa3.42□□□□□ -1.86
SHU2YDR078C MKC7P53379 596 aa3.42□□□□□ -1.86
SHU2YDR078C TRM82Q03774 444 aa3.42□□□□□ -1.86
SHU2YDR078C YMR027WQ04371 470 aa3.42□□□□□ -1.86
SHU2YDR078C NAG1Q8TGN9 163 aa3.42□□□□□ -1.86
SHU2YDR078C MEK1P24719 497 aaPredicted RBP3.41□□□□□ -1.86
SHU2YDR078C SMF2P38778 549 aa3.41□□□□□ -1.86
SHU2YDR078C FHL1P39521 936 aa3.41□□□□□ -1.86
SHU2YDR078C YER186CP40101 306 aa3.41□□□□□ -1.86
SHU2YDR078C DFG10P40526 253 aa3.41□□□□□ -1.86
SHU2YDR078C MND1P53102 219 aa3.41□□□□□ -1.86
SHU2YDR078C OKP1P53298 406 aa3.41□□□□□ -1.86
SHU2YDR078C SKI8Q02793 397 aaPredicted RBP3.41□□□□□ -1.86
SHU2YDR078C YMR111CQ04461 462 aaPredicted RBP3.41□□□□□ -1.86
SHU2YDR078C DDC1Q08949 612 aa3.41□□□□□ -1.86
SHU2YDR078C SAM4Q08985 325 aaKnown RBP3.41□□□□□ -1.86
SHU2YDR078C FRE8Q12209 686 aa3.41□□□□□ -1.86
SHU2YDR078C MCT1Q12283 360 aa3.41□□□□□ -1.86
SHU2YDR078C LDB17Q12342 491 aa3.41□□□□□ -1.86
SHU2YDR078C RPN6Q12377 434 aa3.41□□□□□ -1.86
SHU2YDR078C STE2D6VTK4 431 aa3.4□□□□□ -1.87
SHU2YDR078C ADH2P00331 348 aaKnown RBP3.4□□□□□ -1.87
SHU2YDR078C MIR1P23641 311 aaKnown RBP3.4□□□□□ -1.87
SHU2YDR078C ITR2P30606 609 aa3.4□□□□□ -1.87
SHU2YDR078C SWD3P38123 315 aa3.4□□□□□ -1.87
SHU2YDR078C DTR1P38125 572 aa3.4□□□□□ -1.87
SHU2YDR078C RCK2P38623 610 aa3.4□□□□□ -1.87
SHU2YDR078C AIM10P39965 576 aaKnown RBP3.4□□□□□ -1.87
SHU2YDR078C HEM14P40012 539 aa3.4□□□□□ -1.87
SHU2YDR078C DSE1P40077 573 aa3.4□□□□□ -1.87
SHU2YDR078C YFL040WP43562 540 aa3.4□□□□□ -1.87
SHU2YDR078C YNL260CP53846 198 aa3.4□□□□□ -1.87
SHU2YDR078C RRG7Q08774 242 aaPredicted RBP3.4□□□□□ -1.87
SHU2YDR078C ATP16Q12165 160 aa3.4□□□□□ -1.87
SHU2YDR078C SFM1Q12314 213 aa3.4□□□□□ -1.87
SHU2YDR078C SSA3P09435 649 aaKnown RBP3.39□□□□□ -1.87
SHU2YDR078C AAT2P23542 418 aaKnown RBP3.39□□□□□ -1.87
SHU2YDR078C GIT1P25346 518 aa3.39□□□□□ -1.87
SHU2YDR078C MEI5P32489 222 aa3.39□□□□□ -1.87
SHU2YDR078C ECT1P33412 323 aa3.39□□□□□ -1.87
SHU2YDR078C YMR262WP38430 313 aa3.39□□□□□ -1.87
SHU2YDR078C OXA1P39952 402 aa3.39□□□□□ -1.87
SHU2YDR078C COX16P47081 118 aa3.39□□□□□ -1.87
SHU2YDR078C BIO4P53630 237 aa3.39□□□□□ -1.87
SHU2YDR078C HCH1P53834 153 aa3.39□□□□□ -1.87
SHU2YDR078C VAC7P53950 1165 aa3.39□□□□□ -1.87
SHU2YDR078C SUR7P54003 302 aa3.39□□□□□ -1.87
SHU2YDR078C YPL080CQ02826 108 aa3.39□□□□□ -1.87
SHU2YDR078C YET2Q04210 160 aa3.39□□□□□ -1.87
SHU2YDR078C FSH2Q05015 223 aa3.39□□□□□ -1.87
SHU2YDR078C BCP1Q06338 283 aa3.39□□□□□ -1.87
SHU2YDR078C SIA1Q12212 622 aa3.39□□□□□ -1.87
SHU2YDR078C HRT3Q12347 344 aa3.39□□□□□ -1.87
SHU2YDR078C SAL1D6W196 494 aa3.38□□□□□ -1.87
SHU2YDR078C RAD7P06779 565 aa3.38□□□□□ -1.87
SHU2YDR078C ISY1P21374 235 aaPredicted RBP3.38□□□□□ -1.87
SHU2YDR078C GPI12P23797 304 aa3.38□□□□□ -1.87
SHU2YDR078C LDS1P31379 325 aa3.38□□□□□ -1.87
SHU2YDR078C PMT2P31382 759 aa3.38□□□□□ -1.87
SHU2YDR078C MRPL10P36520 322 aa3.38□□□□□ -1.87
SHU2YDR078C BAT1P38891 393 aaKnown RBP3.38□□□□□ -1.87
SHU2YDR078C MIG3P39943 394 aa3.38□□□□□ -1.87
SHU2YDR078C UTP18P40362 594 aaPredicted RBP3.38□□□□□ -1.87
SHU2YDR078C MOB2P43563 287 aa3.38□□□□□ -1.87
SHU2YDR078C AIM23P47015 356 aa3.38□□□□□ -1.87
SHU2YDR078C YNL050CP53952 270 aa3.38□□□□□ -1.87
SHU2YDR078C PRP38Q00723 242 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms