RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C YDR034W-BQ6Q5X2 51 aa1.92□□□□□ -2.1
SPC72YAL047C GSC2P40989 1895 aa1.92□□□□□ -2.1
SPC72YAL047C RPL12AP0CX53 165 aaKnown RBP1.92□□□□□ -2.1
SPC72YAL047C RPL12BP0CX54 165 aa1.92□□□□□ -2.1
SPC72YAL047C SLX1P38324 304 aa1.92□□□□□ -2.1
SPC72YAL047C RTT105P40063 208 aa1.92□□□□□ -2.1
SPC72YAL047C ALF1P53904 254 aa1.92□□□□□ -2.1
SPC72YAL047C ERV25P54837 211 aaKnown RBP1.92□□□□□ -2.1
SPC72YAL047C YPR078CQ06813 372 aa1.92□□□□□ -2.1
SPC72YAL047C AAD15Q08361 143 aa1.92□□□□□ -2.1
SPC72YAL047C JID1Q12350 301 aa1.92□□□□□ -2.1
SPC72YAL047C VPS63O13549 108 aa1.91□□□□□ -2.1
SPC72YAL047C MAS1P10507 462 aa1.91□□□□□ -2.1
SPC72YAL047C DBP3P20447 523 aaKnown RBP1.91□□□□□ -2.1
SPC72YAL047C DBR1P24309 405 aaKnown RBP1.91□□□□□ -2.1
SPC72YAL047C GRR1P24814 1151 aa1.91□□□□□ -2.1
SPC72YAL047C DAL80P26343 269 aa1.91□□□□□ -2.1
SPC72YAL047C PPQ1P32945 549 aa1.91□□□□□ -2.1
SPC72YAL047C RIB7P33312 244 aa1.91□□□□□ -2.1
SPC72YAL047C CHK1P38147 527 aa1.91□□□□□ -2.1
SPC72YAL047C RTC2P38279 296 aa1.91□□□□□ -2.1
SPC72YAL047C LIN1P38852 340 aaPredicted RBP1.91□□□□□ -2.1
SPC72YAL047C COX14P39103 70 aa1.91□□□□□ -2.1
SPC72YAL047C MIG3P39943 394 aa1.91□□□□□ -2.1
SPC72YAL047C SIM1P40472 476 aa1.91□□□□□ -2.1
SPC72YAL047C SNL1P40548 159 aa1.91□□□□□ -2.1
SPC72YAL047C VPS20Q04272 221 aa1.91□□□□□ -2.1
SPC72YAL047C YMR310CQ04867 317 aaPredicted RBP1.91□□□□□ -2.1
SPC72YAL047C YDL012CQ12489 107 aa1.91□□□□□ -2.1
SPC72YAL047C SPO24Q3E752 67 aa1.91□□□□□ -2.1
SPC72YAL047C AAT2P23542 418 aaKnown RBP1.9□□□□□ -2.1
SPC72YAL047C HXT2P23585 541 aa1.9□□□□□ -2.1
SPC72YAL047C MRPL40P36534 297 aa1.9□□□□□ -2.1
SPC72YAL047C YBL028CP38202 106 aa1.9□□□□□ -2.1
SPC72YAL047C AIM20P40451 204 aa1.9□□□□□ -2.1
SPC72YAL047C YFR018CP43599 363 aa1.9□□□□□ -2.1
SPC72YAL047C YFR057WP43625 151 aa1.9□□□□□ -2.1
SPC72YAL047C BIR1P47134 954 aa1.9□□□□□ -2.1
SPC72YAL047C STE23Q06010 1027 aa1.9□□□□□ -2.1
SPC72YAL047C PLP2Q12017 286 aa1.9□□□□□ -2.1
SPC72YAL047C AIM45Q12480 344 aaKnown RBP1.9□□□□□ -2.1
SPC72YAL047C HKR1P41809 1802 aa1.9□□□□□ -2.11
SPC72YAL047C PMD1P32634 1753 aa1.9□□□□□ -2.11
SPC72YAL047C CBP2P03874 630 aaPredicted RBP1.9□□□□□ -2.11
SPC72YAL047C TPK3P05986 398 aa1.9□□□□□ -2.11
SPC72YAL047C RPL40AP0CH08 128 aaKnown RBP1.9□□□□□ -2.11
SPC72YAL047C RPL40BP0CH09 128 aaKnown RBP1.9□□□□□ -2.11
SPC72YAL047C RNA1P11745 407 aaKnown RBP1.9□□□□□ -2.11
SPC72YAL047C THR4P16120 514 aaKnown RBP1.9□□□□□ -2.11
SPC72YAL047C YCL068CP25593 260 aa1.9□□□□□ -2.11
SPC72YAL047C PRR1P28708 518 aa1.9□□□□□ -2.11
SPC72YAL047C MSK1P32048 576 aa1.9□□□□□ -2.11
SPC72YAL047C SSE1P32589 693 aaKnown RBP1.9□□□□□ -2.11
SPC72YAL047C IES6P32617 166 aa1.9□□□□□ -2.11
SPC72YAL047C COX13P32799 129 aa1.9□□□□□ -2.11
SPC72YAL047C SPT10P35208 640 aa1.9□□□□□ -2.11
SPC72YAL047C ALP1P38971 573 aa1.9□□□□□ -2.11
SPC72YAL047C SSO2P39926 295 aa1.9□□□□□ -2.11
SPC72YAL047C VAB2P40003 282 aa1.9□□□□□ -2.11
SPC72YAL047C ATM1P40416 690 aa1.9□□□□□ -2.11
SPC72YAL047C STE24P47154 453 aa1.9□□□□□ -2.11
SPC72YAL047C RNY1Q02933 434 aaKnown RBP1.9□□□□□ -2.11
SPC72YAL047C VHS1Q03785 461 aa1.9□□□□□ -2.11
SPC72YAL047C AIM33Q04516 312 aa1.9□□□□□ -2.11
SPC72YAL047C MSC3Q05812 728 aa1.9□□□□□ -2.11
SPC72YAL047C RIF2Q06208 395 aa1.9□□□□□ -2.11
SPC72YAL047C ARR1Q06596 294 aa1.9□□□□□ -2.11
SPC72YAL047C LDS2Q08218 356 aa1.9□□□□□ -2.11
SPC72YAL047C TPT1Q12272 230 aaKnown RBP1.9□□□□□ -2.11
SPC72YAL047C NCA2Q12374 616 aa1.9□□□□□ -2.11
SPC72YAL047C PFK27Q12471 397 aaPredicted RBP1.9□□□□□ -2.11
SPC72YAL047C RRP36Q12481 300 aaPredicted RBP1.9□□□□□ -2.11
SPC72YAL047C CDC37P06101 506 aaKnown RBP1.89□□□□□ -2.11
SPC72YAL047C ATP1P07251 545 aaKnown RBP1.89□□□□□ -2.11
SPC72YAL047C ARF1P11076 181 aaKnown RBP1.89□□□□□ -2.11
SPC72YAL047C GCD2P12754 651 aaPredicted RBP1.89□□□□□ -2.11
SPC72YAL047C GAL3P13045 520 aa1.89□□□□□ -2.11
SPC72YAL047C PUT4P15380 627 aa1.89□□□□□ -2.11
SPC72YAL047C HMX1P32339 317 aa1.89□□□□□ -2.11
SPC72YAL047C DOA1P36037 715 aa1.89□□□□□ -2.11
SPC72YAL047C ATP3P38077 311 aaKnown RBP1.89□□□□□ -2.11
SPC72YAL047C SBE22P38814 852 aa1.89□□□□□ -2.11
SPC72YAL047C TOS3P43637 560 aa1.89□□□□□ -2.11
SPC72YAL047C YGL114WP53134 725 aa1.89□□□□□ -2.11
SPC72YAL047C RET3P53600 189 aa1.89□□□□□ -2.11
SPC72YAL047C ARP5P53946 755 aa1.89□□□□□ -2.11
SPC72YAL047C SMP3Q04174 516 aa1.89□□□□□ -2.11
SPC72YAL047C YLR297WQ05899 129 aa1.89□□□□□ -2.11
SPC72YAL047C CUR1Q06469 252 aa1.89□□□□□ -2.11
SPC72YAL047C GLE1Q12315 538 aa1.89□□□□□ -2.11
SPC72YAL047C FSH3Q99369 266 aa1.89□□□□□ -2.11
SPC72YAL047C GAL7P08431 366 aa1.88□□□□□ -2.11
SPC72YAL047C RNR2P09938 399 aaKnown RBP1.88□□□□□ -2.11
SPC72YAL047C RPS16AP0CX51 143 aaKnown RBP1.88□□□□□ -2.11
SPC72YAL047C RPS16BP0CX52 143 aaKnown RBP1.88□□□□□ -2.11
SPC72YAL047C MSI1P13712 422 aa1.88□□□□□ -2.11
SPC72YAL047C MNN9P39107 395 aaKnown RBP1.88□□□□□ -2.11
SPC72YAL047C PRP39P39682 629 aaKnown RBP1.88□□□□□ -2.11
SPC72YAL047C YHC3P47040 408 aa1.88□□□□□ -2.11
SPC72YAL047C MRM2P53123 320 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 124.9 ms