RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 MRX11Q03079 207 aa3.23□□□□□ -1.89
snR78snR78 SPC19Q03954 165 aa3.23□□□□□ -1.89
snR78snR78 ISA2Q12425 185 aa3.23□□□□□ -1.89
snR78snR78 AST1P35183 429 aa3.22□□□□□ -1.89
snR78snR78 SPS19P32573 292 aaKnown RBP3.21□□□□□ -1.9
snR78snR78 TRR2P38816 342 aa3.21□□□□□ -1.9
snR78snR78 YGR015CP53208 328 aa3.21□□□□□ -1.9
snR78snR78 RTT102P53330 157 aa3.21□□□□□ -1.9
snR78snR78 YDL109CQ12103 647 aa3.21□□□□□ -1.9
snR78snR78 RNA1P11745 407 aaKnown RBP3.2□□□□□ -1.9
snR78snR78 FUS3P16892 353 aaKnown RBP3.2□□□□□ -1.9
snR78snR78 PTK1P36002 662 aaPredicted RBP3.2□□□□□ -1.9
snR78snR78 STB1P42845 420 aa3.2□□□□□ -1.9
snR78snR78 CTK3P46963 296 aaPredicted RBP3.2□□□□□ -1.9
snR78snR78 LTV1P34078 463 aa3.19□□□□□ -1.9
snR78snR78 CDH1P53197 566 aa3.19□□□□□ -1.9
snR78snR78 ZRG17P53735 605 aa3.19□□□□□ -1.9
snR78snR78 GAS2Q06135 555 aa3.19□□□□□ -1.9
snR78snR78 AAD15Q08361 143 aa3.19□□□□□ -1.9
snR78snR78 DBP7P36120 742 aaKnown RBP3.18□□□□□ -1.9
snR78snR78 SHE1P38200 338 aa3.18□□□□□ -1.9
snR78snR78 YDR541CQ03049 344 aa3.18□□□□□ -1.9
snR78snR78 INP2Q03824 705 aa3.18□□□□□ -1.9
snR78snR78 GAT3Q07928 141 aa3.18□□□□□ -1.9
snR78snR78 YAL067W-AQ8TGK6 75 aa3.18□□□□□ -1.9
snR78snR78 RPL23AP0CX41 137 aaKnown RBP3.17□□□□□ -1.9
snR78snR78 RPL23BP0CX42 137 aaKnown RBP3.17□□□□□ -1.9
snR78snR78 FRM2P37261 193 aa3.17□□□□□ -1.9
snR78snR78 SPO73P40031 143 aa3.17□□□□□ -1.9
snR78snR78 YJR054WP47114 497 aa3.17□□□□□ -1.9
snR78snR78 SLT2Q00772 484 aa3.17□□□□□ -1.9
snR78snR78 VPS72Q03388 795 aa3.17□□□□□ -1.9
snR78snR78 NDL1Q06568 189 aa3.17□□□□□ -1.9
snR78snR78 STE2D6VTK4 431 aa3.16□□□□□ -1.9
snR78snR78 SKG6P32900 734 aaPredicted RBP3.15□□□□□ -1.91
snR78snR78 SWE1P32944 819 aa3.15□□□□□ -1.91
snR78snR78 GPM3Q12326 303 aa3.15□□□□□ -1.91
snR78snR78 CKA2P19454 339 aa3.14□□□□□ -1.91
snR78snR78 MRPL8P22353 238 aa3.14□□□□□ -1.91
snR78snR78 RRP7P25368 297 aaPredicted RBP3.14□□□□□ -1.91
snR78snR78 KAP104P38217 918 aaKnown RBP3.14□□□□□ -1.91
snR78snR78 MNL1P38888 796 aa3.14□□□□□ -1.91
snR78snR78 AIM23P47015 356 aa3.14□□□□□ -1.91
snR78snR78 MEH1Q02205 184 aa3.14□□□□□ -1.91
snR78snR78 FAR10Q06001 478 aa3.14□□□□□ -1.91
snR78snR78 HRT1Q08273 121 aa3.14□□□□□ -1.91
snR78snR78 MIR1P23641 311 aaKnown RBP3.13□□□□□ -1.91
snR78snR78 RAD23P32628 398 aaKnown RBP3.13□□□□□ -1.91
snR78snR78 YIL059CP40520 121 aa3.13□□□□□ -1.91
snR78snR78 YLH47Q06493 454 aa3.13□□□□□ -1.91
snR78snR78 NOP6Q07623 225 aaKnown RBP3.13□□□□□ -1.91
snR78snR78 FLO11P08640 1367 aa3.12□□□□□ -1.91
snR78snR78 YPR096CO13587 100 aa3.12□□□□□ -1.91
snR78snR78 COS4P43542 379 aa3.12□□□□□ -1.91
snR78snR78 SED5Q01590 340 aa3.12□□□□□ -1.91
snR78snR78 API2Q04413 109 aa3.12□□□□□ -1.91
snR78snR78 YOL029CQ08187 201 aa3.12□□□□□ -1.91
snR78snR78 PMT2P31382 759 aa3.11□□□□□ -1.91
snR78snR78 SRB2P34162 210 aa3.11□□□□□ -1.91
snR78snR78 UFE1P41834 346 aa3.11□□□□□ -1.91
snR78snR78 SAL1D6W196 494 aa3.1□□□□□ -1.91
snR78snR78 CBF5P33322 483 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
snR78snR78 GGC1P38988 300 aa3.1□□□□□ -1.91
snR78snR78 YJL144WP47009 104 aa3.1□□□□□ -1.91
snR78snR78 SHS1Q07657 551 aa3.1□□□□□ -1.91
snR78snR78 YKR015CP36111 568 aa3.09□□□□□ -1.91
snR78snR78 SPP381P38282 291 aaPredicted RBP3.09□□□□□ -1.91
snR78snR78 BUD27P43573 796 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
snR78snR78 RPS14AP06367 137 aaKnown RBP3.08□□□□□ -1.92
snR78snR78 SSE1P32589 693 aaKnown RBP3.08□□□□□ -1.92
snR78snR78 YHR177WP38867 453 aa3.08□□□□□ -1.92
snR78snR78 RPS14BP39516 138 aaKnown RBP3.08□□□□□ -1.92
snR78snR78 IPK1Q06667 281 aa3.08□□□□□ -1.92
snR78snR78 YDL211CQ12121 372 aa3.07□□□□□ -1.92
snR78snR78 YOR338WQ99326 363 aa3.07□□□□□ -1.92
snR78snR78 BGL2P15703 313 aaKnown RBP3.06□□□□□ -1.92
snR78snR78 VTI1Q04338 217 aa3.06□□□□□ -1.92
snR78snR78 BDH1P39714 382 aa3.05□□□□□ -1.92
snR78snR78 GYL1Q04322 720 aa3.05□□□□□ -1.92
snR78snR78 SPE3Q12074 293 aaKnown RBP3.05□□□□□ -1.92
snR78snR78 COX10P21592 462 aa3.04□□□□□ -1.92
snR78snR78 YHR182WP38870 785 aa3.04□□□□□ -1.92
snR78snR78 MMT2Q08970 484 aa3.04□□□□□ -1.92
snR78snR78 TIP20P33891 701 aa3.03□□□□□ -1.92
snR78snR78 MOB2P43563 287 aa3.03□□□□□ -1.92
snR78snR78 YJR030CP47101 745 aa3.03□□□□□ -1.92
snR78snR78 EFM3P47163 339 aa3.03□□□□□ -1.92
snR78snR78 APC4Q04601 652 aa3.03□□□□□ -1.92
snR78snR78 RPN5Q12250 445 aaKnown RBP3.03□□□□□ -1.92
snR78snR78 DET1Q99288 334 aaKnown RBP3.03□□□□□ -1.92
snR78snR78 RPL1AP0CX43 217 aaKnown RBP3.02□□□□□ -1.93
snR78snR78 RPL1BP0CX44 217 aaKnown RBP3.02□□□□□ -1.93
snR78snR78 PRM1P53835 661 aa3.02□□□□□ -1.93
snR78snR78 CIK1Q01649 594 aa3.02□□□□□ -1.93
snR78snR78 SMC6Q12749 1114 aa3.02□□□□□ -1.93
snR78snR78 SRN2Q99176 213 aa3.02□□□□□ -1.93
snR78snR78 LYS12P40495 371 aaKnown RBP3.01□□□□□ -1.93
snR78snR78 SLM3Q12093 417 aa3.01□□□□□ -1.93
snR78snR78 FRE8Q12209 686 aa3.01□□□□□ -1.93
snR78snR78 UBA3Q99344 299 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms