RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YPL199CQ08954 240 aa3.58□□□□□ -1.84
ECM16YMR128W LAS17Q12446 633 aa3.58□□□□□ -1.84
ECM16YMR128W RPS18AP0CX55 146 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W RPS18BP0CX56 146 aaPredicted RBP3.57□□□□□ -1.84
ECM16YMR128W PET54P10834 293 aa3.57□□□□□ -1.84
ECM16YMR128W PET9P18239 318 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W DAL81P21657 970 aa3.57□□□□□ -1.84
ECM16YMR128W MSS1P32559 526 aaPredicted RBP3.57□□□□□ -1.84
ECM16YMR128W RPD3P32561 433 aa3.57□□□□□ -1.84
ECM16YMR128W MTC7P32633 139 aa3.57□□□□□ -1.84
ECM16YMR128W RSM22P36056 628 aa3.57□□□□□ -1.84
ECM16YMR128W MRPL3P36516 390 aa3.57□□□□□ -1.84
ECM16YMR128W HSE1P38753 452 aa3.57□□□□□ -1.84
ECM16YMR128W MDM31P38880 579 aa3.57□□□□□ -1.84
ECM16YMR128W NDE1P40215 560 aa3.57□□□□□ -1.84
ECM16YMR128W PRP24P49960 444 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W JAC1P53193 184 aa3.57□□□□□ -1.84
ECM16YMR128W CAF40P53829 373 aa3.57□□□□□ -1.84
ECM16YMR128W IRC15Q02733 499 aa3.57□□□□□ -1.84
ECM16YMR128W YLR224WQ05947 369 aa3.57□□□□□ -1.84
ECM16YMR128W TPO3Q06451 622 aa3.57□□□□□ -1.84
ECM16YMR128W ATP16Q12165 160 aa3.57□□□□□ -1.84
ECM16YMR128W PEX11Q12462 236 aa3.57□□□□□ -1.84
ECM16YMR128W YLR422WQ06409 1932 aa3.57□□□□□ -1.84
ECM16YMR128W SCH9P11792 824 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W LAT1P12695 482 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W YJU2P28320 278 aaPredicted RBP3.57□□□□□ -1.84
ECM16YMR128W PRO1P32264 428 aa3.57□□□□□ -1.84
ECM16YMR128W NAT2P37293 288 aa3.57□□□□□ -1.84
ECM16YMR128W GID8P40208 455 aa3.57□□□□□ -1.84
ECM16YMR128W DUG1P43616 481 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W MDV1P47025 714 aa3.57□□□□□ -1.84
ECM16YMR128W YAE1P47118 141 aaPredicted RBP3.57□□□□□ -1.84
ECM16YMR128W SPO77Q06134 477 aa3.57□□□□□ -1.84
ECM16YMR128W VPS74Q06385 345 aa3.57□□□□□ -1.84
ECM16YMR128W YPR022CQ12139 1133 aa3.57□□□□□ -1.84
ECM16YMR128W TIR4Q12218 487 aaPredicted RBP3.57□□□□□ -1.84
ECM16YMR128W RTN2Q12443 393 aa3.57□□□□□ -1.84
ECM16YMR128W YAR066WP0CX18 203 aa3.57□□□□□ -1.84
ECM16YMR128W YHR214WP0CX19 203 aa3.57□□□□□ -1.84
ECM16YMR128W SST2P11972 698 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W YCK1P23291 538 aa3.57□□□□□ -1.84
ECM16YMR128W YCP4P25349 247 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W TRX3P25372 127 aa3.57□□□□□ -1.84
ECM16YMR128W RTC2P38279 296 aa3.57□□□□□ -1.84
ECM16YMR128W MBA1P38300 278 aa3.57□□□□□ -1.84
ECM16YMR128W PTH1P38876 190 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W ALD5P40047 520 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W GDS1P41913 522 aa3.57□□□□□ -1.84
ECM16YMR128W NBP35P52920 328 aa3.57□□□□□ -1.84
ECM16YMR128W ART5P53244 586 aaKnown RBP3.57□□□□□ -1.84
ECM16YMR128W MRPS16Q02608 121 aa3.57□□□□□ -1.84
ECM16YMR128W YPL068CQ02749 293 aa3.57□□□□□ -1.84
ECM16YMR128W RRN11Q04712 507 aa3.57□□□□□ -1.84
ECM16YMR128W DXO1Q06349 442 aa3.57□□□□□ -1.84
ECM16YMR128W MLC2Q06580 163 aa3.57□□□□□ -1.84
ECM16YMR128W ATG41Q12048 136 aa3.57□□□□□ -1.84
ECM16YMR128W YDR215CQ12240 137 aa3.57□□□□□ -1.84
ECM16YMR128W YOR214CQ12282 236 aa3.57□□□□□ -1.84
ECM16YMR128W YOR012WQ12351 137 aa3.57□□□□□ -1.84
ECM16YMR128W LAG2Q92325 660 aa3.57□□□□□ -1.84
ECM16YMR128W SPS2P08459 502 aa3.56□□□□□ -1.84
ECM16YMR128W PRP28P23394 588 aa3.56□□□□□ -1.84
ECM16YMR128W CNB1P25296 175 aa3.56□□□□□ -1.84
ECM16YMR128W PRE4P30657 266 aa3.56□□□□□ -1.84
ECM16YMR128W ATP11P32453 318 aa3.56□□□□□ -1.84
ECM16YMR128W TUL1P36096 758 aa3.56□□□□□ -1.84
ECM16YMR128W ALG14P38242 237 aa3.56□□□□□ -1.84
ECM16YMR128W YER184CP39961 794 aa3.56□□□□□ -1.84
ECM16YMR128W VPS25P47142 202 aa3.56□□□□□ -1.84
ECM16YMR128W STE24P47154 453 aa3.56□□□□□ -1.84
ECM16YMR128W IBA57P47158 497 aa3.56□□□□□ -1.84
ECM16YMR128W PMT3P47190 753 aa3.56□□□□□ -1.84
ECM16YMR128W EMC4P53073 190 aa3.56□□□□□ -1.84
ECM16YMR128W YGR079WP53249 370 aa3.56□□□□□ -1.84
ECM16YMR128W MSC1Q03104 513 aa3.56□□□□□ -1.84
ECM16YMR128W BUR2Q05949 395 aa3.56□□□□□ -1.84
ECM16YMR128W UTP21Q06078 939 aaPredicted RBP3.56□□□□□ -1.84
ECM16YMR128W LEA1Q08963 238 aaPredicted RBP3.56□□□□□ -1.84
ECM16YMR128W YOR283WQ12040 230 aaKnown RBP3.56□□□□□ -1.84
ECM16YMR128W YCL012CQ8J0M4 134 aa3.56□□□□□ -1.84
ECM16YMR128W RPS9BP05755 195 aaKnown RBP3.56□□□□□ -1.84
ECM16YMR128W PHO80P20052 293 aa3.56□□□□□ -1.84
ECM16YMR128W NTH1P32356 751 aa3.56□□□□□ -1.84
ECM16YMR128W PRP18P33411 251 aaPredicted RBP3.56□□□□□ -1.84
ECM16YMR128W CTF8P38877 133 aa3.56□□□□□ -1.84
ECM16YMR128W FMC1P40491 155 aa3.56□□□□□ -1.84
ECM16YMR128W FAF1P40546 346 aaPredicted RBP3.56□□□□□ -1.84
ECM16YMR128W RPL10P41805 221 aaKnown RBP3.56□□□□□ -1.84
ECM16YMR128W IRC7P43623 340 aa3.56□□□□□ -1.84
ECM16YMR128W AAD10P47182 288 aa3.56□□□□□ -1.84
ECM16YMR128W UBC9P50623 157 aaPredicted RBP3.56□□□□□ -1.84
ECM16YMR128W RRN9P53437 365 aa3.56□□□□□ -1.84
ECM16YMR128W ERV25P54837 211 aaKnown RBP3.56□□□□□ -1.84
ECM16YMR128W PIR1Q03178 341 aa3.56□□□□□ -1.84
ECM16YMR128W YDR249CQ03787 373 aa3.56□□□□□ -1.84
ECM16YMR128W YOR289WQ12012 251 aaPredicted RBP3.56□□□□□ -1.84
ECM16YMR128W YPR011CQ12251 326 aa3.56□□□□□ -1.84
ECM16YMR128W YPR096CO13587 100 aa3.56□□□□□ -1.84
ECM16YMR128W RPS17AP02407 136 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms