RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP82YJL061W YKR015CP36111 568 aa1.88□□□□□ -2.11
NUP82YJL061W KEG1P43614 200 aa1.88□□□□□ -2.11
NUP82YJL061W VHT1P53241 593 aa1.88□□□□□ -2.11
NUP82YJL061W PRP38Q00723 242 aaPredicted RBP1.88□□□□□ -2.11
NUP82YJL061W UTP6Q02354 440 aaKnown RBP1.88□□□□□ -2.11
NUP82YJL061W ENT5Q03769 411 aaKnown RBP1.88□□□□□ -2.11
NUP82YJL061W AIM33Q04516 312 aa1.88□□□□□ -2.11
NUP82YJL061W YMR310CQ04867 317 aaPredicted RBP1.88□□□□□ -2.11
NUP82YJL061W FSH2Q05015 223 aa1.88□□□□□ -2.11
NUP82YJL061W YLH47Q06493 454 aa1.88□□□□□ -2.11
NUP82YJL061W MCH1Q07376 486 aa1.88□□□□□ -2.11
NUP82YJL061W NFI1Q12216 726 aa1.88□□□□□ -2.11
NUP82YJL061W MRPS9P38120 278 aa1.88□□□□□ -2.11
NUP82YJL061W DED81P38707 554 aaKnown RBP1.88□□□□□ -2.11
NUP82YJL061W CTK3P46963 296 aaPredicted RBP1.88□□□□□ -2.11
NUP82YJL061W YGL262WP53054 175 aa1.88□□□□□ -2.11
NUP82YJL061W VAC7P53950 1165 aa1.88□□□□□ -2.11
NUP82YJL061W TPS1Q00764 495 aaKnown RBP1.88□□□□□ -2.11
NUP82YJL061W DBP9Q06218 594 aaKnown RBP1.88□□□□□ -2.11
NUP82YJL061W MCT1Q12283 360 aa1.88□□□□□ -2.11
NUP82YJL061W GLE1Q12315 538 aa1.88□□□□□ -2.11
NUP82YJL061W CBP6P07253 162 aaPredicted RBP1.87□□□□□ -2.11
NUP82YJL061W RPL23AP0CX41 137 aaKnown RBP1.87□□□□□ -2.11
NUP82YJL061W RPL23BP0CX42 137 aaKnown RBP1.87□□□□□ -2.11
NUP82YJL061W COS9P36034 407 aa1.87□□□□□ -2.11
NUP82YJL061W WSC4P38739 605 aa1.87□□□□□ -2.11
NUP82YJL061W PEX22P39718 180 aa1.87□□□□□ -2.11
NUP82YJL061W YJR030CP47101 745 aa1.87□□□□□ -2.11
NUP82YJL061W YNL143CP53908 130 aa1.87□□□□□ -2.11
NUP82YJL061W SFG1Q12507 346 aa1.87□□□□□ -2.11
NUP82YJL061W UBA3Q99344 299 aa1.87□□□□□ -2.11
NUP82YJL061W GRR1P24814 1151 aa1.87□□□□□ -2.11
NUP82YJL061W ANP1P32629 500 aa1.87□□□□□ -2.11
NUP82YJL061W PRM1P53835 661 aa1.87□□□□□ -2.11
NUP82YJL061W AQR1P53943 586 aa1.87□□□□□ -2.11
NUP82YJL061W YLR177WQ06251 628 aa1.87□□□□□ -2.11
NUP82YJL061W YOL075CQ08234 1294 aa1.87□□□□□ -2.11
NUP82YJL061W YPQ1Q12010 308 aa1.87□□□□□ -2.11
NUP82YJL061W ATP16Q12165 160 aa1.87□□□□□ -2.11
NUP82YJL061W LDB17Q12342 491 aa1.87□□□□□ -2.11
NUP82YJL061W AIM45Q12480 344 aaKnown RBP1.87□□□□□ -2.11
NUP82YJL061W DET1Q99288 334 aaKnown RBP1.87□□□□□ -2.11
NUP82YJL061W ASP3-2P0CX77 362 aa1.86□□□□□ -2.11
NUP82YJL061W ASP3-3P0CX78 362 aa1.86□□□□□ -2.11
NUP82YJL061W ASP3-4P0CX79 362 aa1.86□□□□□ -2.11
NUP82YJL061W ASP3-1P0CZ17 362 aa1.86□□□□□ -2.11
NUP82YJL061W UNG1P12887 359 aa1.86□□□□□ -2.11
NUP82YJL061W POT1P27796 417 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
NUP82YJL061W MRPL27P36526 146 aaPredicted RBP1.86□□□□□ -2.11
NUP82YJL061W SIF2P38262 535 aa1.86□□□□□ -2.11
NUP82YJL061W YPT35P38815 214 aaKnown RBP1.86□□□□□ -2.11
NUP82YJL061W SEO1P39709 593 aa1.86□□□□□ -2.11
NUP82YJL061W RBG1P39729 369 aa1.86□□□□□ -2.11
NUP82YJL061W LST7P53237 242 aa1.86□□□□□ -2.11
NUP82YJL061W RNH201P53942 307 aa1.86□□□□□ -2.11
NUP82YJL061W SMP3Q04174 516 aa1.86□□□□□ -2.11
NUP82YJL061W RRB1Q04225 511 aaKnown RBP1.86□□□□□ -2.11
NUP82YJL061W GAS2Q06135 555 aa1.86□□□□□ -2.11
NUP82YJL061W RPS16AP0CX51 143 aaKnown RBP1.85□□□□□ -2.11
NUP82YJL061W RPS16BP0CX52 143 aaKnown RBP1.85□□□□□ -2.11
NUP82YJL061W CKI1P20485 582 aa1.85□□□□□ -2.11
NUP82YJL061W FAR1P21268 830 aa1.85□□□□□ -2.11
NUP82YJL061W MIR1P23641 311 aaKnown RBP1.85□□□□□ -2.11
NUP82YJL061W PTK1P36002 662 aaPredicted RBP1.85□□□□□ -2.11
NUP82YJL061W CUE3P53137 624 aaKnown RBP1.85□□□□□ -2.11
NUP82YJL061W ECM11Q04110 302 aa1.85□□□□□ -2.11
NUP82YJL061W YDR115WQ04598 105 aa1.85□□□□□ -2.11
NUP82YJL061W APC5Q08683 685 aa1.85□□□□□ -2.11
NUP82YJL061W STE3P06783 470 aa1.85□□□□□ -2.11
NUP82YJL061W TAL1P15019 335 aaKnown RBP1.85□□□□□ -2.11
NUP82YJL061W ARF2P19146 181 aaKnown RBP1.85□□□□□ -2.11
NUP82YJL061W YEL043WP32618 956 aa1.85□□□□□ -2.11
NUP82YJL061W TOA1P32773 286 aa1.85□□□□□ -2.11
NUP82YJL061W ECT1P33412 323 aa1.85□□□□□ -2.11
NUP82YJL061W YBR241CP38142 488 aa1.85□□□□□ -2.11
NUP82YJL061W YHR122WP38829 231 aa1.85□□□□□ -2.11
NUP82YJL061W HEM14P40012 539 aa1.85□□□□□ -2.11
NUP82YJL061W AIM23P47015 356 aa1.85□□□□□ -2.11
NUP82YJL061W YHC3P47040 408 aa1.85□□□□□ -2.11
NUP82YJL061W EFM3P47163 339 aa1.85□□□□□ -2.11
NUP82YJL061W PGU1P47180 361 aa1.85□□□□□ -2.11
NUP82YJL061W SLT2Q00772 484 aa1.85□□□□□ -2.11
NUP82YJL061W YOR012WQ12351 137 aa1.85□□□□□ -2.11
NUP82YJL061W ADH1P00330 348 aaKnown RBP1.84□□□□□ -2.11
NUP82YJL061W SAG1P20840 650 aa1.84□□□□□ -2.11
NUP82YJL061W MRPS5P33759 307 aa1.84□□□□□ -2.11
NUP82YJL061W YIL089WP40500 205 aa1.84□□□□□ -2.11
NUP82YJL061W YNL320WP42840 284 aa1.84□□□□□ -2.11
NUP82YJL061W BIO3P50277 480 aa1.84□□□□□ -2.11
NUP82YJL061W SEH1P53011 349 aaKnown RBP1.84□□□□□ -2.11
NUP82YJL061W PDR16P53860 351 aaKnown RBP1.84□□□□□ -2.11
NUP82YJL061W RPL21AQ02753 160 aaKnown RBP1.84□□□□□ -2.11
NUP82YJL061W ARR1Q06596 294 aa1.84□□□□□ -2.11
NUP82YJL061W SRO7Q12038 1033 aa1.84□□□□□ -2.11
NUP82YJL061W RPL21BQ12672 160 aaKnown RBP1.84□□□□□ -2.11
NUP82YJL061W YBL111CQ3E7Y5 667 aa1.84□□□□□ -2.11
NUP82YJL061W MXR2P25566 168 aa1.84□□□□□ -2.12
NUP82YJL061W ZUO1P32527 433 aaKnown RBP1.84□□□□□ -2.12
NUP82YJL061W SMI1P32566 505 aa1.84□□□□□ -2.12
NUP82YJL061W UIP5P36137 443 aa1.84□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms