RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W AQR1P53943 586 aa2.03□□□□□ -2.08
PEP8YJL053W VHS1Q03785 461 aa2.03□□□□□ -2.08
PEP8YJL053W TSA2Q04120 196 aa2.03□□□□□ -2.08
PEP8YJL053W RRB1Q04225 511 aaKnown RBP2.03□□□□□ -2.08
PEP8YJL053W FSH2Q05015 223 aa2.03□□□□□ -2.08
PEP8YJL053W DBP9Q06218 594 aaKnown RBP2.03□□□□□ -2.08
PEP8YJL053W YPR078CQ06813 372 aa2.03□□□□□ -2.08
PEP8YJL053W DNL4Q08387 944 aaPredicted RBP2.03□□□□□ -2.08
PEP8YJL053W NFI1Q12216 726 aa2.03□□□□□ -2.08
PEP8YJL053W SFM1Q12314 213 aa2.03□□□□□ -2.08
PEP8YJL053W LDB17Q12342 491 aa2.03□□□□□ -2.08
PEP8YJL053W YOR338WQ99326 363 aa2.03□□□□□ -2.08
PEP8YJL053W FSH3Q99369 266 aa2.03□□□□□ -2.08
PEP8YJL053W FAB1P34756 2278 aa2.02□□□□□ -2.09
PEP8YJL053W ASP3-2P0CX77 362 aa2.02□□□□□ -2.09
PEP8YJL053W ASP3-3P0CX78 362 aa2.02□□□□□ -2.09
PEP8YJL053W ASP3-4P0CX79 362 aa2.02□□□□□ -2.09
PEP8YJL053W ASP3-1P0CZ17 362 aa2.02□□□□□ -2.09
PEP8YJL053W DAP2P18962 818 aa2.02□□□□□ -2.09
PEP8YJL053W CMK2P22517 447 aa2.02□□□□□ -2.09
PEP8YJL053W MRPS9P38120 278 aa2.02□□□□□ -2.09
PEP8YJL053W WSC4P38739 605 aa2.02□□□□□ -2.09
PEP8YJL053W PEX22P39718 180 aa2.02□□□□□ -2.09
PEP8YJL053W YPS5P53057 165 aa2.02□□□□□ -2.09
PEP8YJL053W YNL143CP53908 130 aa2.02□□□□□ -2.09
PEP8YJL053W UTP6Q02354 440 aaKnown RBP2.02□□□□□ -2.09
PEP8YJL053W MRPS16Q02608 121 aa2.02□□□□□ -2.09
PEP8YJL053W ENT5Q03769 411 aaKnown RBP2.02□□□□□ -2.09
PEP8YJL053W AIM33Q04516 312 aa2.02□□□□□ -2.09
PEP8YJL053W YHC1Q05900 231 aaKnown RBP2.02□□□□□ -2.09
PEP8YJL053W GAT3Q07928 141 aa2.02□□□□□ -2.09
PEP8YJL053W UBA3Q99344 299 aa2.02□□□□□ -2.09
PEP8YJL053W RPL23AP0CX41 137 aaKnown RBP2.01□□□□□ -2.09
PEP8YJL053W RPL23BP0CX42 137 aaKnown RBP2.01□□□□□ -2.09
PEP8YJL053W YEL043WP32618 956 aa2.01□□□□□ -2.09
PEP8YJL053W YPT35P38815 214 aaKnown RBP2.01□□□□□ -2.09
PEP8YJL053W RBG1P39729 369 aa2.01□□□□□ -2.09
PEP8YJL053W YIL089WP40500 205 aa2.01□□□□□ -2.09
PEP8YJL053W KEG1P43614 200 aa2.01□□□□□ -2.09
PEP8YJL053W CIN2P46670 268 aa2.01□□□□□ -2.09
PEP8YJL053W CUE3P53137 624 aaKnown RBP2.01□□□□□ -2.09
PEP8YJL053W VHT1P53241 593 aa2.01□□□□□ -2.09
PEP8YJL053W PRP38Q00723 242 aaPredicted RBP2.01□□□□□ -2.09
PEP8YJL053W TPS1Q00764 495 aaKnown RBP2.01□□□□□ -2.09
PEP8YJL053W SMP3Q04174 516 aa2.01□□□□□ -2.09
PEP8YJL053W YLH47Q06493 454 aa2.01□□□□□ -2.09
PEP8YJL053W YOL075CQ08234 1294 aa2.01□□□□□ -2.09
PEP8YJL053W APC5Q08683 685 aa2.01□□□□□ -2.09
PEP8YJL053W RGS2Q99188 309 aa2.01□□□□□ -2.09
PEP8YJL053W TAL1P15019 335 aaKnown RBP2□□□□□ -2.09
PEP8YJL053W ARF2P19146 181 aaKnown RBP2□□□□□ -2.09
PEP8YJL053W OPI1P21957 404 aa2□□□□□ -2.09
PEP8YJL053W GRR1P24814 1151 aa2□□□□□ -2.09
PEP8YJL053W CHA1P25379 360 aaKnown RBP2□□□□□ -2.09
PEP8YJL053W POT1P27796 417 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
PEP8YJL053W SMI1P32566 505 aa2□□□□□ -2.09
PEP8YJL053W UIP5P36137 443 aa2□□□□□ -2.09
PEP8YJL053W SIF2P38262 535 aa2□□□□□ -2.09
PEP8YJL053W CAJ1P39101 391 aa2□□□□□ -2.09
PEP8YJL053W ALD5P40047 520 aaKnown RBP2□□□□□ -2.09
PEP8YJL053W YNL320WP42840 284 aa2□□□□□ -2.09
PEP8YJL053W YGL262WP53054 175 aa2□□□□□ -2.09
PEP8YJL053W LST7P53237 242 aa2□□□□□ -2.09
PEP8YJL053W PDR16P53860 351 aaKnown RBP2□□□□□ -2.09
PEP8YJL053W RNH201P53942 307 aa2□□□□□ -2.09
PEP8YJL053W VAC7P53950 1165 aa2□□□□□ -2.09
PEP8YJL053W ECM11Q04110 302 aa2□□□□□ -2.09
PEP8YJL053W GAS2Q06135 555 aa2□□□□□ -2.09
PEP8YJL053W ARR1Q06596 294 aa2□□□□□ -2.09
PEP8YJL053W YPQ1Q12010 308 aa2□□□□□ -2.09
PEP8YJL053W SFG1Q12507 346 aa2□□□□□ -2.09
PEP8YJL053W STE3P06783 470 aa1.99□□□□□ -2.09
PEP8YJL053W CBP6P07253 162 aaPredicted RBP1.99□□□□□ -2.09
PEP8YJL053W YLL053CP0CD98 152 aa1.99□□□□□ -2.09
PEP8YJL053W UNG1P12887 359 aa1.99□□□□□ -2.09
PEP8YJL053W CKI1P20485 582 aa1.99□□□□□ -2.09
PEP8YJL053W MIR1P23641 311 aaKnown RBP1.99□□□□□ -2.09
PEP8YJL053W PTK1P36002 662 aaPredicted RBP1.99□□□□□ -2.09
PEP8YJL053W CTK3P46963 296 aaPredicted RBP1.99□□□□□ -2.09
PEP8YJL053W YHC3P47040 408 aa1.99□□□□□ -2.09
PEP8YJL053W ATP22P50273 684 aaPredicted RBP1.99□□□□□ -2.09
PEP8YJL053W YGR016WP53209 190 aa1.99□□□□□ -2.09
PEP8YJL053W HST1P53685 503 aa1.99□□□□□ -2.09
PEP8YJL053W YNL146WP53906 100 aa1.99□□□□□ -2.09
PEP8YJL053W SLT2Q00772 484 aa1.99□□□□□ -2.09
PEP8YJL053W YDR115WQ04598 105 aa1.99□□□□□ -2.09
PEP8YJL053W YLR177WQ06251 628 aa1.99□□□□□ -2.09
PEP8YJL053W ATP16Q12165 160 aa1.99□□□□□ -2.09
PEP8YJL053W AIM45Q12480 344 aaKnown RBP1.99□□□□□ -2.09
PEP8YJL053W DET1Q99288 334 aaKnown RBP1.99□□□□□ -2.09
PEP8YJL053W FAR1P21268 830 aa1.98□□□□□ -2.09
PEP8YJL053W HXT2P23585 541 aa1.98□□□□□ -2.09
PEP8YJL053W ANP1P32629 500 aa1.98□□□□□ -2.09
PEP8YJL053W MRPS5P33759 307 aa1.98□□□□□ -2.09
PEP8YJL053W PCH2P38126 564 aa1.98□□□□□ -2.09
PEP8YJL053W YBR241CP38142 488 aa1.98□□□□□ -2.09
PEP8YJL053W YHR122WP38829 231 aa1.98□□□□□ -2.09
PEP8YJL053W SEO1P39709 593 aa1.98□□□□□ -2.09
PEP8YJL053W YMR134WP40207 237 aa1.98□□□□□ -2.09
PEP8YJL053W MOB2P43563 287 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms