RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C DBP9Q06218 594 aaKnown RBP2.39□□□□□ -2.03
PRP38YGR075C PGC1Q08959 321 aa2.39□□□□□ -2.03
PRP38YGR075C PCL9Q12477 304 aa2.39□□□□□ -2.03
PRP38YGR075C RPS19AP07280 144 aaKnown RBP2.38□□□□□ -2.03
PRP38YGR075C RPS19BP07281 144 aaPredicted RBP2.38□□□□□ -2.03
PRP38YGR075C ARF1P11076 181 aaKnown RBP2.38□□□□□ -2.03
PRP38YGR075C UBA1P22515 1024 aaKnown RBP2.38□□□□□ -2.03
PRP38YGR075C ANP1P32629 500 aa2.38□□□□□ -2.03
PRP38YGR075C CYM1P32898 989 aa2.38□□□□□ -2.03
PRP38YGR075C SPO23P33757 523 aa2.38□□□□□ -2.03
PRP38YGR075C MCR1P36060 302 aaKnown RBP2.38□□□□□ -2.03
PRP38YGR075C UIP5P36137 443 aa2.38□□□□□ -2.03
PRP38YGR075C SOL2P37262 315 aa2.38□□□□□ -2.03
PRP38YGR075C ECM8P38246 354 aa2.38□□□□□ -2.03
PRP38YGR075C SPP381P38282 291 aaPredicted RBP2.38□□□□□ -2.03
PRP38YGR075C YHR177WP38867 453 aa2.38□□□□□ -2.03
PRP38YGR075C FHL1P39521 936 aa2.38□□□□□ -2.03
PRP38YGR075C SFG1Q12507 346 aa2.38□□□□□ -2.03
PRP38YGR075C TPK3P05986 398 aa2.37□□□□□ -2.03
PRP38YGR075C RNA1P11745 407 aaKnown RBP2.37□□□□□ -2.03
PRP38YGR075C SCH9P11792 824 aaKnown RBP2.37□□□□□ -2.03
PRP38YGR075C CHA1P25379 360 aaKnown RBP2.37□□□□□ -2.03
PRP38YGR075C RDS1P25611 832 aa2.37□□□□□ -2.03
PRP38YGR075C PSO2P30620 661 aa2.37□□□□□ -2.03
PRP38YGR075C YEL043WP32618 956 aa2.37□□□□□ -2.03
PRP38YGR075C PDC2P32896 925 aa2.37□□□□□ -2.03
PRP38YGR075C DOA1P36037 715 aa2.37□□□□□ -2.03
PRP38YGR075C LSM12P38828 187 aaKnown RBP2.37□□□□□ -2.03
PRP38YGR075C ATM1P40416 690 aa2.37□□□□□ -2.03
PRP38YGR075C YGR067CP53243 804 aa2.37□□□□□ -2.03
PRP38YGR075C TRM112P53738 135 aaPredicted RBP2.37□□□□□ -2.03
PRP38YGR075C YNR068CP53754 272 aa2.37□□□□□ -2.03
PRP38YGR075C VAC7P53950 1165 aa2.37□□□□□ -2.03
PRP38YGR075C PRP38Q00723 242 aaPredicted RBP2.37□□□□□ -2.03
PRP38YGR075C UTP6Q02354 440 aaKnown RBP2.37□□□□□ -2.03
PRP38YGR075C YPR078CQ06813 372 aa2.37□□□□□ -2.03
PRP38YGR075C ASA1Q06822 443 aa2.37□□□□□ -2.03
PRP38YGR075C YOR376WQ08900 122 aa2.37□□□□□ -2.03
PRP38YGR075C YOP1Q12402 180 aa2.37□□□□□ -2.03
PRP38YGR075C NBL1Q3E7Y6 73 aa2.37□□□□□ -2.03
PRP38YGR075C IME2P32581 645 aa2.36□□□□□ -2.03
PRP38YGR075C TOA1P32773 286 aa2.36□□□□□ -2.03
PRP38YGR075C YBL028CP38202 106 aa2.36□□□□□ -2.03
PRP38YGR075C WSC4P38739 605 aa2.36□□□□□ -2.03
PRP38YGR075C PEX22P39718 180 aa2.36□□□□□ -2.03
PRP38YGR075C FYV8P46949 817 aaKnown RBP2.36□□□□□ -2.03
PRP38YGR075C RPA34P47006 233 aaPredicted RBP2.36□□□□□ -2.03
PRP38YGR075C ABM1P47146 123 aa2.36□□□□□ -2.03
PRP38YGR075C PDR16P53860 351 aaKnown RBP2.36□□□□□ -2.03
PRP38YGR075C YNL143CP53908 130 aa2.36□□□□□ -2.03
PRP38YGR075C REX2P54964 269 aaKnown RBP2.36□□□□□ -2.03
PRP38YGR075C LDS2Q08218 356 aa2.36□□□□□ -2.03
PRP38YGR075C PSY3Q12318 242 aa2.36□□□□□ -2.03
PRP38YGR075C YOL085CQ99345 113 aa2.36□□□□□ -2.03
PRP38YGR075C KRR1P25586 316 aaPredicted RBP2.35□□□□□ -2.03
PRP38YGR075C SMI1P32566 505 aa2.35□□□□□ -2.03
PRP38YGR075C TIR2P33890 251 aa2.35□□□□□ -2.03
PRP38YGR075C FRT2P39734 528 aa2.35□□□□□ -2.03
PRP38YGR075C NAS2P40555 220 aa2.35□□□□□ -2.03
PRP38YGR075C EFM3P47163 339 aa2.35□□□□□ -2.03
PRP38YGR075C TRF5P48561 642 aaKnown RBP2.35□□□□□ -2.03
PRP38YGR075C RET3P53600 189 aa2.35□□□□□ -2.03
PRP38YGR075C MSC3Q05812 728 aa2.35□□□□□ -2.03
PRP38YGR075C YPR195CQ06594 109 aa2.35□□□□□ -2.03
PRP38YGR075C PEX27Q08580 376 aa2.35□□□□□ -2.03
PRP38YGR075C VMA2P16140 517 aaKnown RBP2.34□□□□□ -2.03
PRP38YGR075C AGA2P32781 87 aa2.34□□□□□ -2.03
PRP38YGR075C RCK2P38623 610 aa2.34□□□□□ -2.03
PRP38YGR075C GEP4P38812 185 aa2.34□□□□□ -2.03
PRP38YGR075C LCP5P40079 357 aaPredicted RBP2.34□□□□□ -2.03
PRP38YGR075C CUE3P53137 624 aaKnown RBP2.34□□□□□ -2.03
PRP38YGR075C MPS2P53159 387 aa2.34□□□□□ -2.03
PRP38YGR075C AQR1P53943 586 aa2.34□□□□□ -2.03
PRP38YGR075C YDR115WQ04598 105 aa2.34□□□□□ -2.03
PRP38YGR075C YLR177WQ06251 628 aa2.34□□□□□ -2.03
PRP38YGR075C PML1Q07930 204 aaPredicted RBP2.34□□□□□ -2.03
PRP38YGR075C SFM1Q12314 213 aa2.34□□□□□ -2.03
PRP38YGR075C RPS18AP0CX55 146 aaKnown RBP2.33□□□□□ -2.04
PRP38YGR075C RPS18BP0CX56 146 aaPredicted RBP2.33□□□□□ -2.04
PRP38YGR075C TAL1P15019 335 aaKnown RBP2.33□□□□□ -2.04
PRP38YGR075C THR4P16120 514 aaKnown RBP2.33□□□□□ -2.04
PRP38YGR075C MSK1P32048 576 aa2.33□□□□□ -2.04
PRP38YGR075C EFB1P32471 206 aaKnown RBP2.33□□□□□ -2.04
PRP38YGR075C SMP1P38128 452 aa2.33□□□□□ -2.04
PRP38YGR075C DIA1P54005 336 aa2.33□□□□□ -2.04
PRP38YGR075C RRB1Q04225 511 aaKnown RBP2.33□□□□□ -2.04
PRP38YGR075C REV3P14284 1504 aa2.32□□□□□ -2.04
PRP38YGR075C STE3P06783 470 aa2.32□□□□□ -2.04
PRP38YGR075C ASP3-2P0CX77 362 aa2.32□□□□□ -2.04
PRP38YGR075C ASP3-3P0CX78 362 aa2.32□□□□□ -2.04
PRP38YGR075C ASP3-4P0CX79 362 aa2.32□□□□□ -2.04
PRP38YGR075C ASP3-1P0CZ17 362 aa2.32□□□□□ -2.04
PRP38YGR075C MRPL8P22353 238 aa2.32□□□□□ -2.04
PRP38YGR075C DBR1P24309 405 aaKnown RBP2.32□□□□□ -2.04
PRP38YGR075C GRR1P24814 1151 aa2.32□□□□□ -2.04
PRP38YGR075C VAM7P32912 316 aa2.32□□□□□ -2.04
PRP38YGR075C YHR122WP38829 231 aa2.32□□□□□ -2.04
PRP38YGR075C LYS12P40495 371 aaKnown RBP2.32□□□□□ -2.04
PRP38YGR075C CPR7P47103 393 aa2.32□□□□□ -2.04
PRP38YGR075C COQ5P49017 307 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms