RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W RPL23AP0CX41 137 aaKnown RBP3.05□□□□□ -1.92
SHR3YDL212W RPL23BP0CX42 137 aaKnown RBP3.05□□□□□ -1.92
SHR3YDL212W PMT2P31382 759 aa3.05□□□□□ -1.92
SHR3YDL212W HIF1Q12373 385 aa3.05□□□□□ -1.92
SHR3YDL212W RPS14AP06367 137 aaKnown RBP3.04□□□□□ -1.92
SHR3YDL212W MDL1P33310 695 aa3.04□□□□□ -1.92
SHR3YDL212W SHE1P38200 338 aa3.04□□□□□ -1.92
SHR3YDL212W RPS14BP39516 138 aaKnown RBP3.04□□□□□ -1.92
SHR3YDL212W PFS2P42841 465 aaKnown RBP3.04□□□□□ -1.92
SHR3YDL212W VEL1P53058 206 aa3.04□□□□□ -1.92
SHR3YDL212W CDH1P53197 566 aa3.04□□□□□ -1.92
SHR3YDL212W YGR015CP53208 328 aa3.04□□□□□ -1.92
SHR3YDL212W YGR067CP53243 804 aa3.04□□□□□ -1.92
SHR3YDL212W RMI1Q02685 241 aa3.04□□□□□ -1.92
SHR3YDL212W YPL107WQ02873 248 aa3.04□□□□□ -1.92
SHR3YDL212W SLF1Q12034 447 aaKnown RBP3.04□□□□□ -1.92
SHR3YDL212W SLM3Q12093 417 aa3.04□□□□□ -1.92
SHR3YDL212W SRN2Q99176 213 aa3.04□□□□□ -1.92
SHR3YDL212W DET1Q99288 334 aaKnown RBP3.04□□□□□ -1.92
SHR3YDL212W RPS19AP07280 144 aaKnown RBP3.03□□□□□ -1.92
SHR3YDL212W RPS19BP07281 144 aaPredicted RBP3.03□□□□□ -1.92
SHR3YDL212W MRPL8P22353 238 aa3.03□□□□□ -1.92
SHR3YDL212W LDS1P31379 325 aa3.03□□□□□ -1.92
SHR3YDL212W SSE1P32589 693 aaKnown RBP3.03□□□□□ -1.92
SHR3YDL212W YBR241CP38142 488 aa3.03□□□□□ -1.92
SHR3YDL212W YJR054WP47114 497 aa3.03□□□□□ -1.92
SHR3YDL212W SXM1Q04175 944 aaKnown RBP3.03□□□□□ -1.92
SHR3YDL212W RFM1Q12192 310 aa3.03□□□□□ -1.92
SHR3YDL212W YOR338WQ99326 363 aa3.03□□□□□ -1.92
SHR3YDL212W MIR1P23641 311 aaKnown RBP3.02□□□□□ -1.93
SHR3YDL212W PSO2P30620 661 aa3.02□□□□□ -1.93
SHR3YDL212W PRY2P36110 329 aa3.02□□□□□ -1.93
SHR3YDL212W GDI1P39958 451 aaKnown RBP3.02□□□□□ -1.93
SHR3YDL212W JEM1P40358 645 aa3.02□□□□□ -1.93
SHR3YDL212W RNH201P53942 307 aa3.02□□□□□ -1.93
SHR3YDL212W YMR010WQ03687 405 aa3.02□□□□□ -1.93
SHR3YDL212W SHS1Q07657 551 aa3.02□□□□□ -1.93
SHR3YDL212W HSP82P02829 709 aaKnown RBP3.01□□□□□ -1.93
SHR3YDL212W ASP3-2P0CX77 362 aa3.01□□□□□ -1.93
SHR3YDL212W ASP3-3P0CX78 362 aa3.01□□□□□ -1.93
SHR3YDL212W ASP3-4P0CX79 362 aa3.01□□□□□ -1.93
SHR3YDL212W ASP3-1P0CZ17 362 aa3.01□□□□□ -1.93
SHR3YDL212W DBR1P24309 405 aaKnown RBP3.01□□□□□ -1.93
SHR3YDL212W TPS2P31688 896 aaKnown RBP3.01□□□□□ -1.93
SHR3YDL212W VAM7P32912 316 aa3.01□□□□□ -1.93
SHR3YDL212W SEC28P40509 296 aaKnown RBP3.01□□□□□ -1.93
SHR3YDL212W MLC1P53141 149 aa3.01□□□□□ -1.93
SHR3YDL212W RET3P53600 189 aa3.01□□□□□ -1.93
SHR3YDL212W MRX11Q03079 207 aa3.01□□□□□ -1.93
SHR3YDL212W YPS3Q12303 508 aa3.01□□□□□ -1.93
SHR3YDL212W BI3Q9ZZW7 517 aa3.01□□□□□ -1.93
SHR3YDL212W FAR1P21268 830 aa3□□□□□ -1.93
SHR3YDL212W PUP2P32379 260 aa3□□□□□ -1.93
SHR3YDL212W FMT1P32785 401 aa3□□□□□ -1.93
SHR3YDL212W RRT13P40042 185 aa3□□□□□ -1.93
SHR3YDL212W LYS12P40495 371 aaKnown RBP3□□□□□ -1.93
SHR3YDL212W RPS16AP0CX51 143 aaKnown RBP2.99□□□□□ -1.93
SHR3YDL212W RPS16BP0CX52 143 aaKnown RBP2.99□□□□□ -1.93
SHR3YDL212W EPT1P22140 391 aa2.99□□□□□ -1.93
SHR3YDL212W CYM1P32898 989 aa2.99□□□□□ -1.93
SHR3YDL212W RXT2P38255 430 aa2.99□□□□□ -1.93
SHR3YDL212W SHE3P38272 425 aaKnown RBP2.99□□□□□ -1.93
SHR3YDL212W ECM34P38728 170 aa2.99□□□□□ -1.93
SHR3YDL212W EPL1P43572 832 aa2.99□□□□□ -1.93
SHR3YDL212W AIM23P47015 356 aa2.99□□□□□ -1.93
SHR3YDL212W COQ5P49017 307 aa2.99□□□□□ -1.93
SHR3YDL212W RCF1Q03713 159 aa2.99□□□□□ -1.93
SHR3YDL212W AIM33Q04516 312 aa2.99□□□□□ -1.93
SHR3YDL212W YFH1Q07540 174 aa2.99□□□□□ -1.93
SHR3YDL212W SCH9P11792 824 aaKnown RBP2.98□□□□□ -1.93
SHR3YDL212W MSK1P32048 576 aa2.98□□□□□ -1.93
SHR3YDL212W COS9P36034 407 aa2.98□□□□□ -1.93
SHR3YDL212W LCP5P40079 357 aaPredicted RBP2.98□□□□□ -1.93
SHR3YDL212W STB1P42845 420 aa2.98□□□□□ -1.93
SHR3YDL212W SLT2Q00772 484 aa2.98□□□□□ -1.93
SHR3YDL212W SCS7Q03529 384 aa2.98□□□□□ -1.93
SHR3YDL212W PEX27Q08580 376 aa2.98□□□□□ -1.93
SHR3YDL212W FRE8Q12209 686 aa2.98□□□□□ -1.93
SHR3YDL212W LDB17Q12342 491 aa2.98□□□□□ -1.93
SHR3YDL212W YAL067W-AQ8TGK6 75 aa2.98□□□□□ -1.93
SHR3YDL212W DAP2P18962 818 aa2.97□□□□□ -1.93
SHR3YDL212W YKR015CP36111 568 aa2.97□□□□□ -1.93
SHR3YDL212W DBP7P36120 742 aaKnown RBP2.97□□□□□ -1.93
SHR3YDL212W YSW1P38280 609 aa2.97□□□□□ -1.93
SHR3YDL212W YJR030CP47101 745 aa2.97□□□□□ -1.93
SHR3YDL212W EFM3P47163 339 aa2.97□□□□□ -1.93
SHR3YDL212W CWC22P53333 577 aaKnown RBP2.97□□□□□ -1.93
SHR3YDL212W TRM82Q03774 444 aa2.97□□□□□ -1.93
SHR3YDL212W DDC1Q08949 612 aa2.97□□□□□ -1.93
SHR3YDL212W AIM45Q12480 344 aaKnown RBP2.97□□□□□ -1.93
SHR3YDL212W SPS19P32573 292 aaKnown RBP2.96□□□□□ -1.94
SHR3YDL212W AGA2P32781 87 aa2.96□□□□□ -1.94
SHR3YDL212W APE4P38821 490 aa2.96□□□□□ -1.94
SHR3YDL212W ATG7P38862 630 aa2.96□□□□□ -1.94
SHR3YDL212W FRT2P39734 528 aa2.96□□□□□ -1.94
SHR3YDL212W SUR7P54003 302 aa2.96□□□□□ -1.94
SHR3YDL212W GAS2Q06135 555 aa2.96□□□□□ -1.94
SHR3YDL212W SFG1Q12507 346 aa2.96□□□□□ -1.94
SHR3YDL212W AUS1Q08409 1394 aa2.96□□□□□ -1.94
SHR3YDL212W BLI1P35727 113 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 82.9 ms