RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 CIN8P27895 1000 aa7.02□□□□□ -1.29
NME1NME1 SWD3P38123 315 aa7.02□□□□□ -1.29
NME1NME1 PCH2P38126 564 aa7.02□□□□□ -1.29
NME1NME1 AIM10P39965 576 aaKnown RBP7.02□□□□□ -1.29
NME1NME1 CRH1P53301 507 aa7.02□□□□□ -1.29
NME1NME1 CWC22P53333 577 aaKnown RBP7.02□□□□□ -1.29
NME1NME1 YDR262WQ12331 272 aa7.02□□□□□ -1.29
NME1NME1 HMS1Q12398 434 aa7.02□□□□□ -1.29
NME1NME1 CBP2P03874 630 aaPredicted RBP7.01□□□□□ -1.29
NME1NME1 PET18P25362 215 aa7.01□□□□□ -1.29
NME1NME1 RTC2P38279 296 aa7.01□□□□□ -1.29
NME1NME1 YPT35P38815 214 aaKnown RBP7.01□□□□□ -1.29
NME1NME1 ATG7P38862 630 aa7.01□□□□□ -1.29
NME1NME1 PTI1P39927 425 aaPredicted RBP7.01□□□□□ -1.29
NME1NME1 BNS1P50084 137 aa7.01□□□□□ -1.29
NME1NME1 SHY1P53266 389 aa7.01□□□□□ -1.29
NME1NME1 ABZ2Q03266 374 aa7.01□□□□□ -1.29
NME1NME1 APC2Q12440 853 aa7.01□□□□□ -1.29
NME1NME1 NAG1Q8TGN9 163 aa7.01□□□□□ -1.29
NME1NME1 RPS18AP0CX55 146 aaKnown RBP7□□□□□ -1.29
NME1NME1 RPS18BP0CX56 146 aaPredicted RBP7□□□□□ -1.29
NME1NME1 ATG18P43601 500 aa7□□□□□ -1.29
NME1NME1 CTK3P46963 296 aaPredicted RBP7□□□□□ -1.29
NME1NME1 MFG1Q07684 458 aa7□□□□□ -1.29
NME1NME1 ANR2P36090 516 aaPredicted RBP6.99□□□□□ -1.29
NME1NME1 YKR015CP36111 568 aa6.99□□□□□ -1.29
NME1NME1 IST2P38250 946 aa6.99□□□□□ -1.29
NME1NME1 PEX32P38292 413 aa6.99□□□□□ -1.29
NME1NME1 CIN2P46670 268 aa6.99□□□□□ -1.29
NME1NME1 YLR297WQ05899 129 aa6.99□□□□□ -1.29
NME1NME1 STE23Q06010 1027 aa6.99□□□□□ -1.29
NME1NME1 VPS63O13549 108 aa6.98□□□□□ -1.29
NME1NME1 GCD2P12754 651 aaPredicted RBP6.98□□□□□ -1.29
NME1NME1 AAT2P23542 418 aaKnown RBP6.98□□□□□ -1.29
NME1NME1 RRF1P38771 230 aa6.98□□□□□ -1.29
NME1NME1 END3P39013 349 aa6.98□□□□□ -1.29
NME1NME1 YDL109CQ12103 647 aa6.98□□□□□ -1.29
NME1NME1 UBA3Q99344 299 aa6.98□□□□□ -1.29
NME1NME1 UTR1P21373 530 aa6.97□□□□□ -1.29
NME1NME1 ISY1P21374 235 aaPredicted RBP6.97□□□□□ -1.29
NME1NME1 LSM12P38828 187 aaKnown RBP6.97□□□□□ -1.29
NME1NME1 OXA1P39952 402 aa6.97□□□□□ -1.29
NME1NME1 BTT1P40314 149 aaPredicted RBP6.97□□□□□ -1.29
NME1NME1 AIM20P40451 204 aa6.97□□□□□ -1.29
NME1NME1 PAL1Q05518 499 aaKnown RBP6.97□□□□□ -1.29
NME1NME1 WTM1Q12363 437 aaKnown RBP6.97□□□□□ -1.29
NME1NME1 HEM4P06174 275 aa6.96□□□□□ -1.3
NME1NME1 MYO3P36006 1272 aa6.96□□□□□ -1.3
NME1NME1 YFR018CP43599 363 aa6.96□□□□□ -1.3
NME1NME1 CHA1P25379 360 aaKnown RBP6.95□□□□□ -1.3
NME1NME1 YEL045CP32616 141 aa6.95□□□□□ -1.3
NME1NME1 MIG3P39943 394 aa6.95□□□□□ -1.3
NME1NME1 PCL7P40186 285 aa6.95□□□□□ -1.3
NME1NME1 UTP18P40362 594 aaPredicted RBP6.95□□□□□ -1.3
NME1NME1 CSM3Q04659 317 aa6.95□□□□□ -1.3
NME1NME1 BUR2Q05949 395 aa6.95□□□□□ -1.3
NME1NME1 RAD1P06777 1100 aa6.94□□□□□ -1.3
NME1NME1 MKK1P32490 508 aa6.94□□□□□ -1.3
NME1NME1 IML3P38265 245 aa6.94□□□□□ -1.3
NME1NME1 YER186CP40101 306 aa6.94□□□□□ -1.3
NME1NME1 ARP5P53946 755 aa6.94□□□□□ -1.3
NME1NME1 RBD2Q12270 262 aa6.94□□□□□ -1.3
NME1NME1 RPL23AP0CX41 137 aaKnown RBP6.93□□□□□ -1.3
NME1NME1 RPL23BP0CX42 137 aaKnown RBP6.93□□□□□ -1.3
NME1NME1 SWC5P38326 303 aa6.93□□□□□ -1.3
NME1NME1 GAB1P41733 394 aa6.93□□□□□ -1.3
NME1NME1 NAS6P50086 228 aa6.93□□□□□ -1.3
NME1NME1 SDT1P53078 280 aa6.93□□□□□ -1.3
NME1NME1 SKI8Q02793 397 aaPredicted RBP6.93□□□□□ -1.3
NME1NME1 CAB5Q03941 241 aa6.93□□□□□ -1.3
NME1NME1 YET2Q04210 160 aa6.93□□□□□ -1.3
NME1NME1 YHC1Q05900 231 aaKnown RBP6.93□□□□□ -1.3
NME1NME1 ERG9P29704 444 aa6.92□□□□□ -1.3
NME1NME1 YPS1P32329 569 aa6.92□□□□□ -1.3
NME1NME1 MNN9P39107 395 aaKnown RBP6.92□□□□□ -1.3
NME1NME1 YMR027WQ04371 470 aa6.92□□□□□ -1.3
NME1NME1 MSC3Q05812 728 aa6.92□□□□□ -1.3
NME1NME1 DNL4Q08387 944 aaPredicted RBP6.92□□□□□ -1.3
NME1NME1 VMA5P31412 392 aaKnown RBP6.91□□□□□ -1.3
NME1NME1 BAT1P38891 393 aaKnown RBP6.91□□□□□ -1.3
NME1NME1 YNL320WP42840 284 aa6.91□□□□□ -1.3
NME1NME1 RVB1Q03940 463 aaKnown RBP6.91□□□□□ -1.3
NME1NME1 LIP2Q06005 328 aa6.91□□□□□ -1.3
NME1NME1 HIF1Q12373 385 aa6.91□□□□□ -1.3
NME1NME1 RPL18AP0CX49 186 aaKnown RBP6.9□□□□□ -1.3
NME1NME1 RPL18BP0CX50 186 aaKnown RBP6.9□□□□□ -1.3
NME1NME1 GIT1P25346 518 aa6.9□□□□□ -1.3
NME1NME1 DAL80P26343 269 aa6.9□□□□□ -1.3
NME1NME1 HXT1P32465 570 aa6.9□□□□□ -1.3
NME1NME1 NUP2P32499 720 aa6.9□□□□□ -1.3
NME1NME1 GPI8P49018 411 aa6.9□□□□□ -1.3
NME1NME1 FSH2Q05015 223 aa6.9□□□□□ -1.3
NME1NME1 DFG10P40526 253 aa6.89□□□□□ -1.31
NME1NME1 TAF6P53040 516 aa6.89□□□□□ -1.31
NME1NME1 YGR168CP53293 376 aa6.89□□□□□ -1.31
NME1NME1 CUR1Q06469 252 aa6.89□□□□□ -1.31
NME1NME1 DCC1P25559 380 aa6.88□□□□□ -1.31
NME1NME1 CDC50P25656 391 aa6.88□□□□□ -1.31
NME1NME1 LDS1P31379 325 aa6.88□□□□□ -1.31
NME1NME1 MRPL40P36534 297 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms