RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 DUSP6Q16828 381 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 FAM102BQ5T8I3 360 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 PLPP4Q5VZY2 271 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 RAB11FIP4Q86YS3 637 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 COLGALT1Q8NBJ5 622 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 VN1R2Q8NFZ6 395 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 ATP8B4Q8TF62 1192 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 ASIC4Q96FT7 647 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 TMEM87BQ96K49 555 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 PPP1R16BQ96T49 567 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 MTA3Q9BTC8 594 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 APOL5Q9BWW9 433 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 IRF2BPLQ9H1B7 796 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 ERVK-5Q9HDB9 667 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 ENTPD7Q9NQZ7 604 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 TYW1Q9NV66 732 aaKnown RBP8.91□□□□□ -0.98
CLK1-215ENST00000621181 HCSTQ9UBK5 93 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 PUF60Q9UHX1 559 aaKnown RBP8.91□□□□□ -0.98
CLK1-215ENST00000621181 RBM8AQ9Y5S9 174 aaKnown RBP8.91□□□□□ -0.98
CLK1-215ENST00000621181 SLC12A7Q9Y666 1083 aa8.91□□□□□ -0.98
CLK1-215ENST00000621181 EVPLQ92817 2033 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 KMT2EQ8IZD2 1858 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 HBP1O60381 514 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 FGFR1P11362 822 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 LAG3P18627 525 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 AVPR2P30518 371 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 CEP55Q53EZ4 464 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 LLGL2Q6P1M3 1020 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 FAM43BQ6ZT52 329 aaPredicted RBP8.9□□□□□ -0.98
CLK1-215ENST00000621181 MICU3Q86XE3 530 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 CKAP2LQ8IYA6 745 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 TMEM40Q8WWA1 233 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 ATOH1Q92858 354 aaPredicted RBP8.9□□□□□ -0.98
CLK1-215ENST00000621181 MAP4K1Q92918 833 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 TCF25Q9BQ70 676 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 ATP6V0A4Q9HBG4 840 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 RGS18Q9NS28 235 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 DAXXQ9UER7 740 aaPredicted RBP8.9□□□□□ -0.98
CLK1-215ENST00000621181 ST3GAL5Q9UNP4 418 aa8.9□□□□□ -0.98
CLK1-215ENST00000621181 NOC2LQ9Y3T9 749 aaKnown RBP8.9□□□□□ -0.98
CLK1-215ENST00000621181 C9IYK1 514 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 DDX39AO00148 427 aaKnown RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 SH2B2O14492 632 aaPredicted RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 ARP10275 920 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 LIFRP42702 1097 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 NAPAP54920 295 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 APOBRQ0VD83 1088 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 ITGB3BPQ13352 177 aaPredicted RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 KIZQ2M2Z5 673 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 FAM160B1Q5W0V3 765 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 PDXDC2PQ6P474 469 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 TMTC3Q6ZXV5 915 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 TRMT1LQ7Z2T5 733 aaKnown RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 KIAA0319LQ8IZA0 1049 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 ABI1Q8IZP0 508 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 METTL13Q8N6R0 699 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 FANCBQ8NB91 859 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 PGBD1Q96JS3 809 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 OSMRQ99650 979 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 CDHR5Q9HBB8 845 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 AGO4Q9HCK5 861 aaKnown RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 TMEM161AQ9NX61 479 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 LZTS1Q9Y250 596 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 NR2E1Q9Y466 385 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 RIF1Q5UIP0 2472 aaKnown RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 MYO10Q9HD67 2058 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 H0Y858 1186 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 ATG7O95352 703 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 FOSP01100 380 aaPredicted RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 HOXB8P17481 243 aaPredicted RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 ZNF76P36508 570 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 KRT17Q04695 432 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 MTMR3Q13615 1198 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 ANKRD54Q6NXT1 300 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 TMEM184AQ6ZMB5 413 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 TMC7Q7Z402 723 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 RASGRP4Q8TDF6 673 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 MRPS27Q92552 414 aaKnown RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 ANO3Q9BYT9 981 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 S1PR5Q9H228 398 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 NGRNQ9NPE2 291 aaKnown RBP8.89□□□□□ -0.99
CLK1-215ENST00000621181 ZNF302Q9NR11 478 aa8.89□□□□□ -0.99
CLK1-215ENST00000621181 COL1A2P08123 1366 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 IGKV6D-21A0A0A0MT36 114 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 FSCN2O14926 492 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 HOXA2O43364 376 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 CCNE2O96020 404 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 PDGFBP01127 241 aaPredicted RBP8.88□□□□□ -0.99
CLK1-215ENST00000621181 VTNP04004 478 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 CA8P35219 290 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 PPM1AP35813 382 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 PBX3P40426 434 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 ADCY7P51828 1080 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 CRYBB1P53674 252 aaPredicted RBP8.88□□□□□ -0.99
CLK1-215ENST00000621181 PLCB3Q01970 1234 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 KCNC3Q14003 757 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 BECN1Q14457 450 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 TPRNQ4KMQ1 711 aa8.88□□□□□ -0.99
CLK1-215ENST00000621181 CES5AQ6NT32 575 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms