RNA–Protein interactions for RNA: YOL138C

RTC1, Transcript of Subunit of the SEA (Seh1-associated) complex, yeast

Gene RTC1, Length 4,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTC1	YOL138C	YTA6	P40328	754 aa		4.09	□□□□□ -1.76
RTC1	YOL138C	CHA4	P43634	648 aa		4.09	□□□□□ -1.76
RTC1	YOL138C	EXG2	P52911	562 aa		4.09	□□□□□ -1.76
RTC1	YOL138C	MRPL19	P53875	158 aa		4.09	□□□□□ -1.76
RTC1	YOL138C	CUZ1	P53899	274 aa		4.09	□□□□□ -1.76
RTC1	YOL138C	DFG5	Q05031	458 aa		4.09	□□□□□ -1.76
RTC1	YOL138C	MLC2	Q06580	163 aa		4.09	□□□□□ -1.76
RTC1	YOL138C	CYK3	Q07533	885 aa		4.09	□□□□□ -1.76
RTC1	YOL138C	COQ10	Q08058	207 aa		4.09	□□□□□ -1.76
RTC1	YOL138C	RPL20A	P0CX23	172 aa	Known RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	RPL20B	P0CX24	172 aa	Predicted RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	LYP1	P32487	611 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	NSG1	P38837	291 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	XBP1	P40489	647 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	UTP25	P40498	721 aa	Known RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	NUP57	P48837	541 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	YGL101W	P53144	215 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	RBG2	P53295	368 aa	Known RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	ATP25	Q03153	612 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	NAT4	Q04751	285 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	PSF1	Q12488	208 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	FLO9	P39712	1322 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	BAR1	P12630	587 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	SEF1	P34228	1148 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	ALP1	P38971	573 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	VMA10	P48836	114 aa	Known RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	SKI8	Q02793	397 aa	Predicted RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	YPL039W	Q03080	316 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	KRE28	Q04431	385 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	ATG26	Q06321	1198 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	ENB1	Q08299	606 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	SIA1	Q12212	622 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	WTM1	Q12363	437 aa	Known RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	DET1	Q99288	334 aa	Known RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	TFS1	P14306	219 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	PEX3	P28795	441 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	YPT7	P32939	208 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	CHK1	P38147	527 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	AIM2	P39721	246 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	LAS21	P40367	830 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	ECO1	P43605	281 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	PMT4	P46971	762 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	ILM1	P47155	203 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	APM1	Q00776	475 aa	Predicted RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	PEX12	Q04370	399 aa		4.08	□□□□□ -1.76
RTC1	YOL138C	PFK27	Q12471	397 aa	Predicted RBP	4.08	□□□□□ -1.76
RTC1	YOL138C	DPM1	P14020	267 aa	Known RBP	4.07	□□□□□ -1.76
RTC1	YOL138C	TOD6	P34219	525 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	YMR262W	P38430	313 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	YLF2	P38746	405 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	PGU1	P47180	361 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	DBP6	P53734	629 aa	Known RBP	4.07	□□□□□ -1.76
RTC1	YOL138C	YPR127W	Q06494	345 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	NIP7	Q08962	181 aa	Known RBP	4.07	□□□□□ -1.76
RTC1	YOL138C	CBP6	P07253	162 aa	Predicted RBP	4.07	□□□□□ -1.76
RTC1	YOL138C	PEP4	P07267	405 aa	Known RBP	4.07	□□□□□ -1.76
RTC1	YOL138C	YAP1	P19880	650 aa	Known RBP	4.07	□□□□□ -1.76
RTC1	YOL138C	SNC1	P31109	117 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	MDJ1	P35191	511 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	LHS1	P36016	881 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	YHR097C	P38809	366 aa	Known RBP	4.07	□□□□□ -1.76
RTC1	YOL138C	AGP3	P43548	558 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	MAL11	P53048	616 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	COG5	P53951	403 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	AVO1	Q08236	1176 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	ACF2	Q12168	779 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	MHF1	Q3E835	90 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	NUP1	P20676	1076 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	MRPL6	P32904	214 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	NIC96	P34077	839 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	MTW1	P39731	289 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	MAM33	P40513	266 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	MPC1	P53157	130 aa	Known RBP	4.07	□□□□□ -1.76
RTC1	YOL138C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RTC1	YOL138C	ABZ2	Q03266	374 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	SNT309	Q06091	175 aa	Predicted RBP	4.07	□□□□□ -1.76
RTC1	YOL138C	YDL218W	Q07629	317 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	RIB3	Q99258	208 aa		4.07	□□□□□ -1.76
RTC1	YOL138C	KGD1	P20967	1014 aa	Known RBP	4.06	□□□□□ -1.76
RTC1	YOL138C	GPI12	P23797	304 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	MXR2	P25566	168 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	EMP70	P32802	667 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	DHR2	P36009	735 aa	Predicted RBP	4.06	□□□□□ -1.76
RTC1	YOL138C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RTC1	YOL138C	YEL068C	P39977	110 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	FMP52	P40008	231 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	ISC1	P40015	477 aa	Known RBP	4.06	□□□□□ -1.76
RTC1	YOL138C	FAR7	P43592	221 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	IMD4	P50094	524 aa	Known RBP	4.06	□□□□□ -1.76
RTC1	YOL138C	FDC1	Q03034	503 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	YDR239C	Q03780	787 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	MRPL1	Q04599	285 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	FAR10	Q06001	478 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	YPQ2	Q06328	317 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	GPI11	Q06636	219 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	SAN1	P22470	610 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	TRM5	P38793	499 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	MET28	P40573	187 aa		4.06	□□□□□ -1.76
RTC1	YOL138C	NOP9	P47077	666 aa	Known RBP	4.06	□□□□□ -1.76
RTC1	YOL138C	HFD1	Q04458	532 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms