RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W CSE2P33308 149 aa2.2□□□□□ -2.06
SWM2YNR004W MID2P36027 376 aa2.2□□□□□ -2.06
SWM2YNR004W LAS1P36146 502 aaPredicted RBP2.2□□□□□ -2.06
SWM2YNR004W GPI18P38211 433 aa2.2□□□□□ -2.06
SWM2YNR004W RTC2P38279 296 aa2.2□□□□□ -2.06
SWM2YNR004W OM14P38325 134 aa2.2□□□□□ -2.06
SWM2YNR004W YHK8P38776 514 aa2.2□□□□□ -2.06
SWM2YNR004W LCP5P40079 357 aaPredicted RBP2.2□□□□□ -2.06
SWM2YNR004W YIL089WP40500 205 aa2.2□□□□□ -2.06
SWM2YNR004W SNL1P40548 159 aa2.2□□□□□ -2.06
SWM2YNR004W FYV8P46949 817 aaKnown RBP2.2□□□□□ -2.06
SWM2YNR004W BIR1P47134 954 aa2.2□□□□□ -2.06
SWM2YNR004W TRF5P48561 642 aaKnown RBP2.2□□□□□ -2.06
SWM2YNR004W MKC7P53379 596 aa2.2□□□□□ -2.06
SWM2YNR004W RRN9P53437 365 aa2.2□□□□□ -2.06
SWM2YNR004W PRM1P53835 661 aa2.2□□□□□ -2.06
SWM2YNR004W KTR6P54070 446 aa2.2□□□□□ -2.06
SWM2YNR004W YLR152CP54072 576 aa2.2□□□□□ -2.06
SWM2YNR004W MEH1Q02205 184 aa2.2□□□□□ -2.06
SWM2YNR004W YPL107WQ02873 248 aa2.2□□□□□ -2.06
SWM2YNR004W YMR310CQ04867 317 aaPredicted RBP2.2□□□□□ -2.06
SWM2YNR004W SMF3Q12078 473 aaPredicted RBP2.2□□□□□ -2.06
SWM2YNR004W SFM1Q12314 213 aa2.2□□□□□ -2.06
SWM2YNR004W GLE1Q12315 538 aa2.2□□□□□ -2.06
SWM2YNR004W AHC1Q12433 566 aa2.2□□□□□ -2.06
SWM2YNR004W FRE6Q12473 712 aa2.2□□□□□ -2.06
SWM2YNR004W NAG1Q8TGN9 163 aa2.2□□□□□ -2.06
SWM2YNR004W ADH2P00331 348 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W SSC1P0CS90 654 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W RPS8AP0CX39 200 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W RPS8BP0CX40 200 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W CLN3P13365 580 aa2.19□□□□□ -2.06
SWM2YNR004W ARF2P19146 181 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W KRR1P25586 316 aaPredicted RBP2.19□□□□□ -2.06
SWM2YNR004W CDC50P25656 391 aa2.19□□□□□ -2.06
SWM2YNR004W RPL16AP26784 199 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W PSO2P30620 661 aa2.19□□□□□ -2.06
SWM2YNR004W SSE1P32589 693 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W ANR2P36090 516 aaPredicted RBP2.19□□□□□ -2.06
SWM2YNR004W GPX2P38143 162 aa2.19□□□□□ -2.06
SWM2YNR004W RFS1P38234 210 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W ECM8P38246 354 aa2.19□□□□□ -2.06
SWM2YNR004W RBG1P39729 369 aa2.19□□□□□ -2.06
SWM2YNR004W YER186CP40101 306 aa2.19□□□□□ -2.06
SWM2YNR004W LCB3P47013 409 aa2.19□□□□□ -2.06
SWM2YNR004W ATP22P50273 684 aaPredicted RBP2.19□□□□□ -2.06
SWM2YNR004W YIP5P53108 310 aa2.19□□□□□ -2.06
SWM2YNR004W YGR016WP53209 190 aa2.19□□□□□ -2.06
SWM2YNR004W AQR1P53943 586 aa2.19□□□□□ -2.06
SWM2YNR004W REX2P54964 269 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W DBP9Q06218 594 aaKnown RBP2.19□□□□□ -2.06
SWM2YNR004W MHR1Q06630 226 aa2.19□□□□□ -2.06
SWM2YNR004W FOL3Q12676 427 aaPredicted RBP2.19□□□□□ -2.06
SWM2YNR004W YCR024C-BQ3E7Z8 88 aa2.19□□□□□ -2.06
SWM2YNR004W HEM4P06174 275 aa2.18□□□□□ -2.06
SWM2YNR004W MAS1P10507 462 aa2.18□□□□□ -2.06
SWM2YNR004W NAT1P12945 854 aaKnown RBP2.18□□□□□ -2.06
SWM2YNR004W ZRC1P20107 442 aa2.18□□□□□ -2.06
SWM2YNR004W OPI1P21957 404 aa2.18□□□□□ -2.06
SWM2YNR004W DPH5P32469 300 aaPredicted RBP2.18□□□□□ -2.06
SWM2YNR004W COS9P36034 407 aa2.18□□□□□ -2.06
SWM2YNR004W EBP2P36049 427 aaKnown RBP2.18□□□□□ -2.06
SWM2YNR004W BMT2P38278 337 aa2.18□□□□□ -2.06
SWM2YNR004W YSW1P38280 609 aa2.18□□□□□ -2.06
SWM2YNR004W YHR122WP38829 231 aa2.18□□□□□ -2.06
SWM2YNR004W PEX22P39718 180 aa2.18□□□□□ -2.06
SWM2YNR004W YJR085CP47131 105 aaKnown RBP2.18□□□□□ -2.06
SWM2YNR004W EFM3P47163 339 aa2.18□□□□□ -2.06
SWM2YNR004W VHT1P53241 593 aa2.18□□□□□ -2.06
SWM2YNR004W CRH1P53301 507 aa2.18□□□□□ -2.06
SWM2YNR004W SKI8Q02793 397 aaPredicted RBP2.18□□□□□ -2.06
SWM2YNR004W TDA1Q03533 586 aa2.18□□□□□ -2.06
SWM2YNR004W YET2Q04210 160 aa2.18□□□□□ -2.06
SWM2YNR004W MRPL35Q06678 367 aa2.18□□□□□ -2.06
SWM2YNR004W ASA1Q06822 443 aa2.18□□□□□ -2.06
SWM2YNR004W YDL199CQ12407 687 aa2.18□□□□□ -2.06
SWM2YNR004W RGS2Q99188 309 aa2.18□□□□□ -2.06
SWM2YNR004W YOR338WQ99326 363 aa2.18□□□□□ -2.06
SWM2YNR004W FSH3Q99369 266 aa2.18□□□□□ -2.06
SWM2YNR004W OPI3P05375 206 aa2.17□□□□□ -2.06
SWM2YNR004W HSP26P15992 214 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
SWM2YNR004W DCC1P25559 380 aa2.17□□□□□ -2.06
SWM2YNR004W ACB1P31787 87 aa2.17□□□□□ -2.06
SWM2YNR004W SPO23P33757 523 aa2.17□□□□□ -2.06
SWM2YNR004W MRPL10P36520 322 aa2.17□□□□□ -2.06
SWM2YNR004W SOL2P37262 315 aa2.17□□□□□ -2.06
SWM2YNR004W SHE3P38272 425 aaKnown RBP2.17□□□□□ -2.06
SWM2YNR004W STP2P38704 541 aa2.17□□□□□ -2.06
SWM2YNR004W EFM1P38732 585 aa2.17□□□□□ -2.06
SWM2YNR004W OXA1P39952 402 aa2.17□□□□□ -2.06
SWM2YNR004W ATG18P43601 500 aa2.17□□□□□ -2.06
SWM2YNR004W HST1P53685 503 aa2.17□□□□□ -2.06
SWM2YNR004W COS1P53822 381 aa2.17□□□□□ -2.06
SWM2YNR004W VHS1Q03785 461 aa2.17□□□□□ -2.06
SWM2YNR004W MSC3Q05812 728 aa2.17□□□□□ -2.06
SWM2YNR004W GAS2Q06135 555 aa2.17□□□□□ -2.06
SWM2YNR004W UBA3Q99344 299 aa2.17□□□□□ -2.06
SWM2YNR004W CBP6P07253 162 aaPredicted RBP2.16□□□□□ -2.06
SWM2YNR004W PRB1P09232 635 aa2.16□□□□□ -2.06
SWM2YNR004W ASP3-2P0CX77 362 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 69.8 ms