RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W GCS1P35197 352 aa3.6□□□□□ -1.83
ECM16YMR128W YRO2P38079 344 aa3.6□□□□□ -1.83
ECM16YMR128W ECM31P38122 312 aa3.6□□□□□ -1.83
ECM16YMR128W YEL073CP39974 107 aa3.6□□□□□ -1.83
ECM16YMR128W IST3P40565 148 aaPredicted RBP3.6□□□□□ -1.83
ECM16YMR128W BNA6P43619 295 aa3.6□□□□□ -1.83
ECM16YMR128W SNX4P47057 423 aa3.6□□□□□ -1.83
ECM16YMR128W PLB2Q03674 706 aa3.6□□□□□ -1.83
ECM16YMR128W YMR034CQ05131 434 aaPredicted RBP3.6□□□□□ -1.83
ECM16YMR128W RRT8Q08219 342 aa3.6□□□□□ -1.83
ECM16YMR128W SUS1Q6WNK7 96 aa3.6□□□□□ -1.83
ECM16YMR128W CYC1P00044 109 aaPredicted RBP3.59□□□□□ -1.83
ECM16YMR128W AI3P03877 415 aa3.59□□□□□ -1.83
ECM16YMR128W AAC1P04710 309 aa3.59□□□□□ -1.83
ECM16YMR128W ATP4P05626 244 aa3.59□□□□□ -1.83
ECM16YMR128W MAS1P10507 462 aa3.59□□□□□ -1.83
ECM16YMR128W MDH1P17505 334 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
ECM16YMR128W SRY1P36007 326 aa3.59□□□□□ -1.83
ECM16YMR128W FMP23P38231 175 aa3.59□□□□□ -1.83
ECM16YMR128W DUN1P39009 513 aa3.59□□□□□ -1.83
ECM16YMR128W INN1P53901 409 aa3.59□□□□□ -1.83
ECM16YMR128W SEG1Q04279 960 aa3.59□□□□□ -1.83
ECM16YMR128W RSC58Q07979 502 aa3.59□□□□□ -1.83
ECM16YMR128W DCI1Q08558 271 aa3.59□□□□□ -1.83
ECM16YMR128W YTM1Q12024 460 aaPredicted RBP3.59□□□□□ -1.83
ECM16YMR128W Q0010Q9ZZX9 128 aa3.59□□□□□ -1.83
ECM16YMR128W ACP1P32463 125 aa3.59□□□□□ -1.83
ECM16YMR128W YKL063CP35725 167 aa3.59□□□□□ -1.83
ECM16YMR128W UIP5P36137 443 aa3.59□□□□□ -1.83
ECM16YMR128W SOL2P37262 315 aa3.59□□□□□ -1.83
ECM16YMR128W YBR225WP38321 900 aa3.59□□□□□ -1.83
ECM16YMR128W YHL041WP38730 149 aa3.59□□□□□ -1.83
ECM16YMR128W AZF1P41696 914 aa3.59□□□□□ -1.83
ECM16YMR128W AIM22P47051 409 aa3.59□□□□□ -1.83
ECM16YMR128W SRP1Q02821 542 aaKnown RBP3.59□□□□□ -1.83
ECM16YMR128W MRPL35Q06678 367 aa3.59□□□□□ -1.83
ECM16YMR128W BSC1Q12140 328 aa3.59□□□□□ -1.83
ECM16YMR128W LPX1Q12405 387 aaKnown RBP3.59□□□□□ -1.83
ECM16YMR128W NSI1Q12457 570 aa3.59□□□□□ -1.83
ECM16YMR128W SNU114P36048 1008 aaKnown RBP3.59□□□□□ -1.84
ECM16YMR128W BMT2P38278 337 aa3.59□□□□□ -1.84
ECM16YMR128W STP2P38704 541 aa3.59□□□□□ -1.84
ECM16YMR128W SBE22P38814 852 aa3.59□□□□□ -1.84
ECM16YMR128W LSM12P38828 187 aaKnown RBP3.59□□□□□ -1.84
ECM16YMR128W AIM10P39965 576 aaKnown RBP3.59□□□□□ -1.84
ECM16YMR128W HPA3P39979 161 aa3.59□□□□□ -1.84
ECM16YMR128W SER3P40054 469 aa3.59□□□□□ -1.84
ECM16YMR128W ALB1P47019 175 aaPredicted RBP3.59□□□□□ -1.84
ECM16YMR128W APS3P47064 194 aa3.59□□□□□ -1.84
ECM16YMR128W GPI8P49018 411 aa3.59□□□□□ -1.84
ECM16YMR128W EFM6P53970 246 aa3.59□□□□□ -1.84
ECM16YMR128W FDC1Q03034 503 aa3.59□□□□□ -1.84
ECM16YMR128W VPS36Q06696 566 aa3.59□□□□□ -1.84
ECM16YMR128W CDA2Q06703 312 aa3.59□□□□□ -1.84
ECM16YMR128W YOS9Q99220 542 aa3.59□□□□□ -1.84
ECM16YMR128W HRP1Q99383 534 aaKnown RBP3.59□□□□□ -1.84
ECM16YMR128W YEL009C-AA0A023PZF2 135 aa3.58□□□□□ -1.84
ECM16YMR128W FUM1P08417 488 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W CKS1P20486 150 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W REC104P33323 182 aa3.58□□□□□ -1.84
ECM16YMR128W APE3P37302 537 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W RCY1P39531 840 aa3.58□□□□□ -1.84
ECM16YMR128W ERG10P41338 398 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W POP1P41812 875 aa3.58□□□□□ -1.84
ECM16YMR128W SLI1P53304 468 aa3.58□□□□□ -1.84
ECM16YMR128W LSM7P53905 115 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W YNL143CP53908 130 aa3.58□□□□□ -1.84
ECM16YMR128W RNH1Q04740 348 aa3.58□□□□□ -1.84
ECM16YMR128W ARO10Q06408 635 aa3.58□□□□□ -1.84
ECM16YMR128W RPN5Q12250 445 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W SVS1Q12254 260 aa3.58□□□□□ -1.84
ECM16YMR128W IDP1P21954 428 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W OAC1P32332 324 aa3.58□□□□□ -1.84
ECM16YMR128W HYM1P32464 399 aa3.58□□□□□ -1.84
ECM16YMR128W HOG1P32485 435 aa3.58□□□□□ -1.84
ECM16YMR128W ASC1P38011 319 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W ISC1P40015 477 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W BIT61P47041 543 aa3.58□□□□□ -1.84
ECM16YMR128W ERV29P53337 310 aa3.58□□□□□ -1.84
ECM16YMR128W SCS7Q03529 384 aa3.58□□□□□ -1.84
ECM16YMR128W YLR173WQ06247 608 aa3.58□□□□□ -1.84
ECM16YMR128W ERP4Q12450 207 aa3.58□□□□□ -1.84
ECM16YMR128W MRPL8P22353 238 aa3.58□□□□□ -1.84
ECM16YMR128W HXT2P23585 541 aa3.58□□□□□ -1.84
ECM16YMR128W SSO1P32867 290 aa3.58□□□□□ -1.84
ECM16YMR128W CTF13P35203 478 aa3.58□□□□□ -1.84
ECM16YMR128W CBP4P37267 147 aa3.58□□□□□ -1.84
ECM16YMR128W MAK5P38112 773 aaPredicted RBP3.58□□□□□ -1.84
ECM16YMR128W GEP4P38812 185 aa3.58□□□□□ -1.84
ECM16YMR128W NVJ1P38881 321 aa3.58□□□□□ -1.84
ECM16YMR128W ZRG8P40021 1076 aa3.58□□□□□ -1.84
ECM16YMR128W EMP65P40085 556 aa3.58□□□□□ -1.84
ECM16YMR128W ATG18P43601 500 aa3.58□□□□□ -1.84
ECM16YMR128W YJL043WP47053 257 aa3.58□□□□□ -1.84
ECM16YMR128W PET130P47065 347 aa3.58□□□□□ -1.84
ECM16YMR128W NPY1P53164 384 aa3.58□□□□□ -1.84
ECM16YMR128W TPS1Q00764 495 aaKnown RBP3.58□□□□□ -1.84
ECM16YMR128W YPL034WQ03083 165 aa3.58□□□□□ -1.84
ECM16YMR128W YMR087WQ04299 284 aa3.58□□□□□ -1.84
ECM16YMR128W ESC8Q08119 714 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 145.6 ms