RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C MPC1P53157 130 aaKnown RBP9.64□□□□□ -0.87
SHM2YLR058C MEP3P53390 489 aa9.64□□□□□ -0.87
SHM2YLR058C SWP1Q02795 286 aa9.64□□□□□ -0.87
SHM2YLR058C DBP10Q12389 995 aaKnown RBP9.64□□□□□ -0.87
SHM2YLR058C RPC40P07703 335 aaKnown RBP9.63□□□□□ -0.87
SHM2YLR058C RRP7P25368 297 aaPredicted RBP9.63□□□□□ -0.87
SHM2YLR058C SMK1P41808 388 aa9.63□□□□□ -0.87
SHM2YLR058C BAP3P41815 604 aa9.63□□□□□ -0.87
SHM2YLR058C YPL068CQ02749 293 aa9.63□□□□□ -0.87
SHM2YLR058C ENT2Q05785 613 aa9.63□□□□□ -0.87
SHM2YLR058C FRE7Q12333 620 aa9.63□□□□□ -0.87
SHM2YLR058C PSF1Q12488 208 aa9.63□□□□□ -0.87
SHM2YLR058C YOL163WP0CF20 169 aa9.62□□□□□ -0.87
SHM2YLR058C LST4P34239 828 aa9.62□□□□□ -0.87
SHM2YLR058C SIC1P38634 284 aa9.62□□□□□ -0.87
SHM2YLR058C YHR097CP38809 366 aaKnown RBP9.62□□□□□ -0.87
SHM2YLR058C PAC1P39946 494 aaKnown RBP9.62□□□□□ -0.87
SHM2YLR058C MPH1P40562 993 aa9.62□□□□□ -0.87
SHM2YLR058C SNO3P43544 222 aa9.62□□□□□ -0.87
SHM2YLR058C MPA43P53583 542 aaPredicted RBP9.62□□□□□ -0.87
SHM2YLR058C DBP6P53734 629 aaKnown RBP9.62□□□□□ -0.87
SHM2YLR058C PEX25Q02969 394 aa9.62□□□□□ -0.87
SHM2YLR058C VID22Q05934 901 aa9.62□□□□□ -0.87
SHM2YLR058C ARV1Q06541 321 aa9.62□□□□□ -0.87
SHM2YLR058C REX3Q12090 404 aa9.62□□□□□ -0.87
SHM2YLR058C YDL211CQ12121 372 aa9.62□□□□□ -0.87
SHM2YLR058C AI1P03875 834 aa9.61□□□□□ -0.87
SHM2YLR058C RPC82P32349 654 aa9.61□□□□□ -0.87
SHM2YLR058C YHR219WP38900 624 aa9.61□□□□□ -0.87
SHM2YLR058C YNL195CP40168 261 aa9.61□□□□□ -0.87
SHM2YLR058C YJR115WP47152 169 aa9.61□□□□□ -0.87
SHM2YLR058C MON1P53129 644 aa9.61□□□□□ -0.87
SHM2YLR058C YGR168CP53293 376 aa9.61□□□□□ -0.87
SHM2YLR058C SMP3Q04174 516 aa9.61□□□□□ -0.87
SHM2YLR058C YOR214CQ12282 236 aa9.61□□□□□ -0.87
SHM2YLR058C MHF1Q3E835 90 aa9.61□□□□□ -0.87
SHM2YLR058C NAR1P23503 491 aaKnown RBP9.6□□□□□ -0.87
SHM2YLR058C PBN1P25580 416 aa9.6□□□□□ -0.87
SHM2YLR058C SSE2P32590 693 aaKnown RBP9.6□□□□□ -0.87
SHM2YLR058C TIF3P34167 436 aaKnown RBP9.6□□□□□ -0.87
SHM2YLR058C CTF8P38877 133 aa9.6□□□□□ -0.87
SHM2YLR058C RIO2P40160 425 aaKnown RBP9.6□□□□□ -0.87
SHM2YLR058C SEH1P53011 349 aaKnown RBP9.6□□□□□ -0.87
SHM2YLR058C NCE101Q02820 53 aa9.6□□□□□ -0.87
SHM2YLR058C YPL119C-AQ3E751 87 aa9.6□□□□□ -0.87
SHM2YLR058C KGD1P20967 1014 aaKnown RBP9.59□□□□□ -0.87
SHM2YLR058C ASF2P32448 525 aaPredicted RBP9.59□□□□□ -0.87
SHM2YLR058C HBS1P32769 611 aaKnown RBP9.59□□□□□ -0.87
SHM2YLR058C EXO84P38261 753 aa9.59□□□□□ -0.87
SHM2YLR058C CUP9P41817 306 aa9.59□□□□□ -0.87
SHM2YLR058C MDV1P47025 714 aa9.59□□□□□ -0.87
SHM2YLR058C EMC2P47133 292 aaKnown RBP9.59□□□□□ -0.87
SHM2YLR058C SNF12P53628 566 aa9.59□□□□□ -0.87
SHM2YLR058C COG5P53951 403 aa9.59□□□□□ -0.87
SHM2YLR058C YLR460CP54007 376 aa9.59□□□□□ -0.87
SHM2YLR058C ITR2P30606 609 aa9.58□□□□□ -0.88
SHM2YLR058C HIR2P32480 875 aa9.58□□□□□ -0.88
SHM2YLR058C ORC2P32833 620 aa9.58□□□□□ -0.88
SHM2YLR058C LHS1P36016 881 aa9.58□□□□□ -0.88
SHM2YLR058C SRO77P38163 1010 aa9.58□□□□□ -0.88
SHM2YLR058C YEL068CP39977 110 aa9.58□□□□□ -0.88
SHM2YLR058C HMS2P47175 358 aa9.58□□□□□ -0.88
SHM2YLR058C URC2Q04411 772 aa9.58□□□□□ -0.88
SHM2YLR058C CRT10Q08226 957 aa9.58□□□□□ -0.88
SHM2YLR058C SKI7Q08491 747 aaPredicted RBP9.58□□□□□ -0.88
SHM2YLR058C PRP46Q12417 451 aaPredicted RBP9.58□□□□□ -0.88
SHM2YLR058C NKP1Q12493 238 aa9.58□□□□□ -0.88
SHM2YLR058C PAR32Q12515 295 aaKnown RBP9.58□□□□□ -0.88
SHM2YLR058C YPT1P01123 206 aaKnown RBP9.57□□□□□ -0.88
SHM2YLR058C YBR139WP38109 508 aa9.57□□□□□ -0.88
SHM2YLR058C ALG3P38179 458 aa9.57□□□□□ -0.88
SHM2YLR058C YER158CP40095 573 aa9.57□□□□□ -0.88
SHM2YLR058C DFG5Q05031 458 aa9.57□□□□□ -0.88
SHM2YLR058C BRX1Q08235 291 aaKnown RBP9.57□□□□□ -0.88
SHM2YLR058C YPR015CQ12531 247 aa9.57□□□□□ -0.88
SHM2YLR058C TPK3P05986 398 aa9.56□□□□□ -0.88
SHM2YLR058C DAT1P13483 248 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C URE2P23202 354 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C BUD5P25300 642 aaPredicted RBP9.56□□□□□ -0.88
SHM2YLR058C YCR100CP25606 316 aa9.56□□□□□ -0.88
SHM2YLR058C PRP19P32523 503 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C PRP21P32524 280 aaPredicted RBP9.56□□□□□ -0.88
SHM2YLR058C SNU114P36048 1008 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C TDA11P38854 504 aa9.56□□□□□ -0.88
SHM2YLR058C EGD2P38879 174 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C SHR5P41912 237 aa9.56□□□□□ -0.88
SHM2YLR058C LEM3P42838 414 aa9.56□□□□□ -0.88
SHM2YLR058C GCN20P43535 752 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C BAT2P47176 376 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C YSA1Q01976 231 aa9.56□□□□□ -0.88
SHM2YLR058C YKR011CQ02209 353 aa9.56□□□□□ -0.88
SHM2YLR058C RSN1Q03516 953 aa9.56□□□□□ -0.88
SHM2YLR058C MDM30Q05930 598 aa9.56□□□□□ -0.88
SHM2YLR058C ERF2Q06551 359 aa9.56□□□□□ -0.88
SHM2YLR058C AKR2Q12013 749 aa9.56□□□□□ -0.88
SHM2YLR058C TPO4Q12256 659 aa9.56□□□□□ -0.88
SHM2YLR058C NPC2Q12408 173 aa9.56□□□□□ -0.88
SHM2YLR058C EMP70P32802 667 aa9.56□□□□□ -0.88
SHM2YLR058C SEC61P32915 480 aa9.56□□□□□ -0.88
SHM2YLR058C YPT7P32939 208 aa9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms