RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	MRP13	P12686	339 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	PHO89	P38361	574 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	ANS1	P38832	159 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	PEX18	P38855	283 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	MEP2	P41948	499 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	PET191	Q02772	108 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	NUR1	Q12066	484 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	RMP1	Q12530	201 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	CBP2	P03874	630 aa	Predicted RBP	4.97	□□□□□ -1.61
RSC30	YHR056C	ADE5,7	P07244	802 aa	Known RBP	4.97	□□□□□ -1.61
RSC30	YHR056C	RVS161	P25343	265 aa	Known RBP	4.97	□□□□□ -1.61
RSC30	YHR056C	YCL049C	P25577	312 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	BUB2	P26448	306 aa	Predicted RBP	4.97	□□□□□ -1.61
RSC30	YHR056C	SHO1	P40073	367 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	FMP32	P43557	207 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	PAC10	P48363	199 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	UPF3	P48412	387 aa	Known RBP	4.97	□□□□□ -1.61
RSC30	YHR056C	CDH1	P53197	566 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	MNT4	P53745	580 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	YLR413W	Q06689	675 aa		4.97	□□□□□ -1.61
RSC30	YHR056C	ILV2	P07342	687 aa	Known RBP	4.96	□□□□□ -1.62
RSC30	YHR056C	TOP3	P13099	656 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	PET123	P17558	318 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	RPO26	P20435	155 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	MDH2	P22133	377 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	DBR1	P24309	405 aa	Known RBP	4.96	□□□□□ -1.62
RSC30	YHR056C	RIM2	P38127	377 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	AIM2	P39721	246 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	SMK1	P41808	388 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	DUG3	P53871	357 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	CYS4	P32582	507 aa	Known RBP	4.96	□□□□□ -1.62
RSC30	YHR056C	FRE2	P36033	711 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	POP1	P41812	875 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	PCP1	P53259	346 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	ASI1	P54074	624 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	VPS60	Q03390	229 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	VBA4	Q04602	768 aa	Known RBP	4.96	□□□□□ -1.62
RSC30	YHR056C	RDL2	Q08742	149 aa	Known RBP	4.96	□□□□□ -1.62
RSC30	YHR056C	BSC1	Q12140	328 aa		4.96	□□□□□ -1.62
RSC30	YHR056C	TFS1	P14306	219 aa		4.95	□□□□□ -1.62
RSC30	YHR056C	PPG1	P32838	368 aa		4.95	□□□□□ -1.62
RSC30	YHR056C	SPP381	P38282	291 aa	Predicted RBP	4.95	□□□□□ -1.62
RSC30	YHR056C	YIR020C	P40575	100 aa		4.95	□□□□□ -1.62
RSC30	YHR056C	YJR154W	P47181	346 aa		4.95	□□□□□ -1.62
RSC30	YHR056C	RRB1	Q04225	511 aa	Known RBP	4.95	□□□□□ -1.62
RSC30	YHR056C	NIP7	Q08962	181 aa	Known RBP	4.95	□□□□□ -1.62
RSC30	YHR056C	CDC8	P00572	216 aa		4.95	□□□□□ -1.62
RSC30	YHR056C	SLZ1	P40167	298 aa		4.95	□□□□□ -1.62
RSC30	YHR056C	BIO4	P53630	237 aa		4.95	□□□□□ -1.62
RSC30	YHR056C	RSM28	Q03430	361 aa		4.95	□□□□□ -1.62
RSC30	YHR056C	RVB1	Q03940	463 aa	Known RBP	4.95	□□□□□ -1.62
RSC30	YHR056C	SSQ1	Q05931	657 aa	Predicted RBP	4.95	□□□□□ -1.62
RSC30	YHR056C	ENB1	Q08299	606 aa		4.95	□□□□□ -1.62
RSC30	YHR056C	VHR1	P40522	640 aa		4.94	□□□□□ -1.62
RSC30	YHR056C	YNR068C	P53754	272 aa		4.94	□□□□□ -1.62
RSC30	YHR056C	NAN1	Q02931	896 aa	Known RBP	4.94	□□□□□ -1.62
RSC30	YHR056C	FRA1	Q07825	749 aa		4.94	□□□□□ -1.62
RSC30	YHR056C	ATP4	P05626	244 aa		4.94	□□□□□ -1.62
RSC30	YHR056C	UNG1	P12887	359 aa		4.94	□□□□□ -1.62
RSC30	YHR056C	YKL107W	P34251	309 aa		4.94	□□□□□ -1.62
RSC30	YHR056C	ATG14	P38270	344 aa		4.94	□□□□□ -1.62
RSC30	YHR056C	STP2	P38704	541 aa		4.94	□□□□□ -1.62
RSC30	YHR056C	DST1	P07273	309 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	RPS5	P26783	225 aa	Known RBP	4.93	□□□□□ -1.62
RSC30	YHR056C	ITR2	P30606	609 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	NGG1	P32494	702 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	TOD6	P34219	525 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	LAS1	P36146	502 aa	Predicted RBP	4.93	□□□□□ -1.62
RSC30	YHR056C	YHR177W	P38867	453 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	MOB2	P43563	287 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	MSA1	Q08471	629 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	RAP1	P11938	827 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	SAC7	P17121	654 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
RSC30	YHR056C	YIL029C	P40538	142 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	NCA3	P46955	337 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	SCY1	P53009	804 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	DBP6	P53734	629 aa	Known RBP	4.93	□□□□□ -1.62
RSC30	YHR056C	SNX41	Q04053	625 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	YPR202W	Q08993	238 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	SET6	Q12529	373 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	YBL113C	Q7M4S9	792 aa		4.93	□□□□□ -1.62
RSC30	YHR056C	RPL35A	P0CX84	120 aa	Known RBP	4.92	□□□□□ -1.62
RSC30	YHR056C	RPL35B	P0CX85	120 aa	Known RBP	4.92	□□□□□ -1.62
RSC30	YHR056C	JEM1	P40358	645 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	COQ11	Q05892	277 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	YLR053C	Q12026	108 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	SUI3	P09064	285 aa	Known RBP	4.92	□□□□□ -1.62
RSC30	YHR056C	HAP4	P14064	554 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	SEC2	P17065	759 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	APA2	P22108	325 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	SEC61	P32915	480 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	LIA1	P47120	325 aa	Known RBP	4.92	□□□□□ -1.62
RSC30	YHR056C	ACS2	P52910	683 aa	Known RBP	4.92	□□□□□ -1.62
RSC30	YHR056C	ELA1	P53861	379 aa	Predicted RBP	4.92	□□□□□ -1.62
RSC30	YHR056C	RCE1	Q03530	315 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	EKI1	Q03764	534 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	STE23	Q06010	1027 aa		4.92	□□□□□ -1.62
RSC30	YHR056C	RDL1	Q12305	139 aa	Known RBP	4.92	□□□□□ -1.62
RSC30	YHR056C	SPE4	Q12455	300 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms