RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W ATS1P31386 333 aa3.22□□□□□ -1.89
PTI1YGR156W YKL097CP34245 136 aa3.22□□□□□ -1.89
PTI1YGR156W MIX23P38162 196 aa3.22□□□□□ -1.89
PTI1YGR156W YBR137WP38276 179 aa3.22□□□□□ -1.89
PTI1YGR156W MTC4P38335 694 aaKnown RBP3.22□□□□□ -1.89
PTI1YGR156W FAA2P39518 744 aa3.22□□□□□ -1.89
PTI1YGR156W LAM5P43560 674 aa3.22□□□□□ -1.89
PTI1YGR156W PHB2P50085 310 aa3.22□□□□□ -1.89
PTI1YGR156W POP6P53218 158 aa3.22□□□□□ -1.89
PTI1YGR156W COS1P53822 381 aa3.22□□□□□ -1.89
PTI1YGR156W YMR181CQ03231 154 aa3.22□□□□□ -1.89
PTI1YGR156W AYT1Q12226 474 aa3.22□□□□□ -1.89
PTI1YGR156W TPT1Q12272 230 aaKnown RBP3.22□□□□□ -1.89
PTI1YGR156W AIM45Q12480 344 aaKnown RBP3.22□□□□□ -1.89
PTI1YGR156W RRP12Q12754 1228 aaKnown RBP3.22□□□□□ -1.89
PTI1YGR156W APC1P53886 1748 aa3.22□□□□□ -1.89
PTI1YGR156W CBP2P03874 630 aaPredicted RBP3.21□□□□□ -1.9
PTI1YGR156W RPS16AP0CX51 143 aaKnown RBP3.21□□□□□ -1.9
PTI1YGR156W RPS16BP0CX52 143 aaKnown RBP3.21□□□□□ -1.9
PTI1YGR156W MAS2P11914 482 aa3.21□□□□□ -1.9
PTI1YGR156W REV1P12689 985 aa3.21□□□□□ -1.9
PTI1YGR156W MTF1P14908 341 aaKnown RBP3.21□□□□□ -1.9
PTI1YGR156W PTR2P32901 601 aa3.21□□□□□ -1.9
PTI1YGR156W SPT10P35208 640 aa3.21□□□□□ -1.9
PTI1YGR156W YBL028CP38202 106 aa3.21□□□□□ -1.9
PTI1YGR156W SHC1P39000 512 aa3.21□□□□□ -1.9
PTI1YGR156W HST1P53685 503 aa3.21□□□□□ -1.9
PTI1YGR156W PPT2Q12036 173 aa3.21□□□□□ -1.9
PTI1YGR156W MDY2Q12285 212 aa3.21□□□□□ -1.9
PTI1YGR156W RRP36Q12481 300 aaPredicted RBP3.21□□□□□ -1.9
PTI1YGR156W YRF1-3P0CX14 1859 aa3.21□□□□□ -1.9
PTI1YGR156W YRF1-7P0CX15 1859 aa3.21□□□□□ -1.9
PTI1YGR156W YRF1-6P53819 1859 aa3.21□□□□□ -1.9
PTI1YGR156W HEM2P05373 342 aa3.2□□□□□ -1.9
PTI1YGR156W ARF1P11076 181 aaKnown RBP3.2□□□□□ -1.9
PTI1YGR156W PTK1P36002 662 aaPredicted RBP3.2□□□□□ -1.9
PTI1YGR156W SLX1P38324 304 aa3.2□□□□□ -1.9
PTI1YGR156W KRE9P39005 276 aa3.2□□□□□ -1.9
PTI1YGR156W SSO2P39926 295 aa3.2□□□□□ -1.9
PTI1YGR156W MMF1P40185 145 aaKnown RBP3.2□□□□□ -1.9
PTI1YGR156W MKT1P40850 830 aaKnown RBP3.2□□□□□ -1.9
PTI1YGR156W TOS3P43637 560 aa3.2□□□□□ -1.9
PTI1YGR156W SFH5P47008 294 aa3.2□□□□□ -1.9
PTI1YGR156W PIR3Q03180 325 aa3.2□□□□□ -1.9
PTI1YGR156W MUM3Q08750 479 aa3.2□□□□□ -1.9
PTI1YGR156W RPO41P13433 1351 aaKnown RBP3.2□□□□□ -1.9
PTI1YGR156W PAB1P04147 577 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
PTI1YGR156W CDC37P06101 506 aaKnown RBP3.19□□□□□ -1.9
PTI1YGR156W RPL20AP0CX23 172 aaKnown RBP3.19□□□□□ -1.9
PTI1YGR156W RPL20BP0CX24 172 aaPredicted RBP3.19□□□□□ -1.9
PTI1YGR156W RPS24AP0CX31 135 aaKnown RBP3.19□□□□□ -1.9
PTI1YGR156W RPS24BP0CX32 135 aaKnown RBP3.19□□□□□ -1.9
PTI1YGR156W SAM1P10659 382 aaKnown RBP3.19□□□□□ -1.9
PTI1YGR156W MSS116P15424 664 aaKnown RBP3.19□□□□□ -1.9
PTI1YGR156W SAM2P19358 384 aaKnown RBP3.19□□□□□ -1.9
PTI1YGR156W PET18P25362 215 aa3.19□□□□□ -1.9
PTI1YGR156W DAL80P26343 269 aa3.19□□□□□ -1.9
PTI1YGR156W VAM7P32912 316 aa3.19□□□□□ -1.9
PTI1YGR156W KKQ8P36004 724 aa3.19□□□□□ -1.9
PTI1YGR156W RPH1P39956 796 aa3.19□□□□□ -1.9
PTI1YGR156W YGR117CP53270 476 aa3.19□□□□□ -1.9
PTI1YGR156W CAF40P53829 373 aa3.19□□□□□ -1.9
PTI1YGR156W HXT11P54862 567 aa3.19□□□□□ -1.9
PTI1YGR156W ABZ2Q03266 374 aa3.19□□□□□ -1.9
PTI1YGR156W VTI1Q04338 217 aa3.19□□□□□ -1.9
PTI1YGR156W BCH1Q05029 724 aa3.19□□□□□ -1.9
PTI1YGR156W LDS2Q08218 356 aa3.19□□□□□ -1.9
PTI1YGR156W PEX27Q08580 376 aa3.19□□□□□ -1.9
PTI1YGR156W RAX1Q08760 435 aa3.19□□□□□ -1.9
PTI1YGR156W CEX1Q12453 761 aa3.19□□□□□ -1.9
PTI1YGR156W VPS63O13549 108 aa3.18□□□□□ -1.9
PTI1YGR156W ATP1P07251 545 aaKnown RBP3.18□□□□□ -1.9
PTI1YGR156W RNR2P09938 399 aaKnown RBP3.18□□□□□ -1.9
PTI1YGR156W MAS1P10507 462 aa3.18□□□□□ -1.9
PTI1YGR156W GAL3P13045 520 aa3.18□□□□□ -1.9
PTI1YGR156W CBS2P14905 389 aa3.18□□□□□ -1.9
PTI1YGR156W SLM5P25345 492 aaKnown RBP3.18□□□□□ -1.9
PTI1YGR156W YCL068CP25593 260 aa3.18□□□□□ -1.9
PTI1YGR156W MSK1P32048 576 aa3.18□□□□□ -1.9
PTI1YGR156W HMX1P32339 317 aa3.18□□□□□ -1.9
PTI1YGR156W EFB1P32471 206 aaKnown RBP3.18□□□□□ -1.9
PTI1YGR156W YEF1P32622 495 aa3.18□□□□□ -1.9
PTI1YGR156W SKT5P34226 696 aa3.18□□□□□ -1.9
PTI1YGR156W EBP2P36049 427 aaKnown RBP3.18□□□□□ -1.9
PTI1YGR156W MCR1P36060 302 aaKnown RBP3.18□□□□□ -1.9
PTI1YGR156W YHR218WP38899 603 aa3.18□□□□□ -1.9
PTI1YGR156W YFR016CP43597 1233 aaKnown RBP3.18□□□□□ -1.9
PTI1YGR156W MPP10P47083 593 aaKnown RBP3.18□□□□□ -1.9
PTI1YGR156W ABM1P47146 123 aa3.18□□□□□ -1.9
PTI1YGR156W YDL186WP48568 277 aa3.18□□□□□ -1.9
PTI1YGR156W AZR1P50080 613 aa3.18□□□□□ -1.9
PTI1YGR156W SHE10P53075 577 aa3.18□□□□□ -1.9
PTI1YGR156W IBD2P53892 351 aa3.18□□□□□ -1.9
PTI1YGR156W ARP5P53946 755 aa3.18□□□□□ -1.9
PTI1YGR156W CUR1Q06469 252 aa3.18□□□□□ -1.9
PTI1YGR156W YPL199CQ08954 240 aa3.18□□□□□ -1.9
PTI1YGR156W NCA2Q12374 616 aa3.18□□□□□ -1.9
PTI1YGR156W SSC1P0CS90 654 aaKnown RBP3.17□□□□□ -1.9
PTI1YGR156W GCD2P12754 651 aaPredicted RBP3.17□□□□□ -1.9
PTI1YGR156W OSM1P21375 501 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms