RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W BTT1P40314 149 aaPredicted RBP2.72□□□□□ -1.97
PRE1YER012W YPS6P40583 537 aa2.72□□□□□ -1.97
PRE1YER012W PHO86P46956 311 aa2.72□□□□□ -1.97
PRE1YER012W PET130P47065 347 aa2.72□□□□□ -1.97
PRE1YER012W YJR054WP47114 497 aa2.72□□□□□ -1.97
PRE1YER012W AQR1P53943 586 aa2.72□□□□□ -1.97
PRE1YER012W KTR5P53966 522 aaPredicted RBP2.72□□□□□ -1.97
PRE1YER012W RPA49Q01080 415 aaPredicted RBP2.72□□□□□ -1.97
PRE1YER012W ODC1Q03028 310 aa2.72□□□□□ -1.97
PRE1YER012W ARO80Q04052 950 aa2.72□□□□□ -1.97
PRE1YER012W GYL1Q04322 720 aa2.72□□□□□ -1.97
PRE1YER012W SIL1Q08199 421 aa2.72□□□□□ -1.97
PRE1YER012W PER33Q12144 273 aa2.72□□□□□ -1.97
PRE1YER012W BI3Q9ZZW7 517 aa2.72□□□□□ -1.97
PRE1YER012W LEU4P06208 619 aaKnown RBP2.71□□□□□ -1.98
PRE1YER012W DFR1P07807 211 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
PRE1YER012W OM45P16547 393 aa2.71□□□□□ -1.98
PRE1YER012W ARF2P19146 181 aaKnown RBP2.71□□□□□ -1.98
PRE1YER012W CRM1P30822 1084 aaKnown RBP2.71□□□□□ -1.98
PRE1YER012W HXT3P32466 567 aaKnown RBP2.71□□□□□ -1.98
PRE1YER012W WBP1P33767 430 aaKnown RBP2.71□□□□□ -1.98
PRE1YER012W YKT6P36015 200 aaKnown RBP2.71□□□□□ -1.98
PRE1YER012W BYE1P36106 594 aa2.71□□□□□ -1.98
PRE1YER012W YCR041WP37265 110 aa2.71□□□□□ -1.98
PRE1YER012W LSM5P40089 93 aaKnown RBP2.71□□□□□ -1.98
PRE1YER012W SER33P40510 469 aa2.71□□□□□ -1.98
PRE1YER012W EMC4P53073 190 aa2.71□□□□□ -1.98
PRE1YER012W MND1P53102 219 aa2.71□□□□□ -1.98
PRE1YER012W YGR066CP53242 292 aa2.71□□□□□ -1.98
PRE1YER012W OGG1P53397 376 aaPredicted RBP2.71□□□□□ -1.98
PRE1YER012W JJJ1P53863 590 aa2.71□□□□□ -1.98
PRE1YER012W SPC19Q03954 165 aa2.71□□□□□ -1.98
PRE1YER012W YDR222WQ04925 415 aa2.71□□□□□ -1.98
PRE1YER012W ERP4Q12450 207 aa2.71□□□□□ -1.98
PRE1YER012W AVL9Q12500 764 aa2.71□□□□□ -1.98
PRE1YER012W TRA1P38811 3744 aa2.71□□□□□ -1.98
PRE1YER012W CIN8P27895 1000 aa2.7□□□□□ -1.98
PRE1YER012W PMT1P33775 817 aa2.7□□□□□ -1.98
PRE1YER012W MRPL10P36520 322 aa2.7□□□□□ -1.98
PRE1YER012W RIB5P38145 238 aa2.7□□□□□ -1.98
PRE1YER012W ECM13P38195 257 aa2.7□□□□□ -1.98
PRE1YER012W SHE3P38272 425 aaKnown RBP2.7□□□□□ -1.98
PRE1YER012W URA8P38627 578 aaPredicted RBP2.7□□□□□ -1.98
PRE1YER012W PFS1P38872 237 aa2.7□□□□□ -1.98
PRE1YER012W SMF1P38925 575 aa2.7□□□□□ -1.98
PRE1YER012W HYR1P40581 163 aaKnown RBP2.7□□□□□ -1.98
PRE1YER012W UFE1P41834 346 aa2.7□□□□□ -1.98
PRE1YER012W OCA1P50946 238 aaPredicted RBP2.7□□□□□ -1.98
PRE1YER012W HST1P53685 503 aa2.7□□□□□ -1.98
PRE1YER012W KTR6P54070 446 aa2.7□□□□□ -1.98
PRE1YER012W HXT11P54862 567 aa2.7□□□□□ -1.98
PRE1YER012W PIR1Q03178 341 aa2.7□□□□□ -1.98
PRE1YER012W YMR027WQ04371 470 aa2.7□□□□□ -1.98
PRE1YER012W AIM32Q04689 311 aa2.7□□□□□ -1.98
PRE1YER012W NAG1Q8TGN9 163 aa2.7□□□□□ -1.98
PRE1YER012W PRP8P33334 2413 aaKnown RBP2.69□□□□□ -1.98
PRE1YER012W CDC37P06101 506 aaKnown RBP2.69□□□□□ -1.98
PRE1YER012W NRP1P32770 719 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
PRE1YER012W NPL6P32832 435 aa2.69□□□□□ -1.98
PRE1YER012W SRB2P34162 210 aa2.69□□□□□ -1.98
PRE1YER012W SRX1P36077 127 aa2.69□□□□□ -1.98
PRE1YER012W ATG12P38316 186 aa2.69□□□□□ -1.98
PRE1YER012W UTP9P38882 575 aaKnown RBP2.69□□□□□ -1.98
PRE1YER012W TIF34P40217 347 aaKnown RBP2.69□□□□□ -1.98
PRE1YER012W RNY1Q02933 434 aaKnown RBP2.69□□□□□ -1.98
PRE1YER012W RTN1Q04947 295 aaKnown RBP2.69□□□□□ -1.98
PRE1YER012W TAF10Q12030 206 aa2.69□□□□□ -1.98
PRE1YER012W YLR046CQ12253 270 aa2.69□□□□□ -1.98
PRE1YER012W GCN1P33892 2672 aaKnown RBP2.68□□□□□ -1.98
PRE1YER012W RAD10P06838 210 aa2.68□□□□□ -1.98
PRE1YER012W RAD3P06839 778 aa2.68□□□□□ -1.98
PRE1YER012W MET16P18408 261 aaPredicted RBP2.68□□□□□ -1.98
PRE1YER012W GEX1P25596 615 aa2.68□□□□□ -1.98
PRE1YER012W MRE11P32829 692 aa2.68□□□□□ -1.98
PRE1YER012W MNS1P32906 549 aa2.68□□□□□ -1.98
PRE1YER012W KDX1P36005 433 aa2.68□□□□□ -1.98
PRE1YER012W MRP21P38175 177 aa2.68□□□□□ -1.98
PRE1YER012W BAT1P38891 393 aaKnown RBP2.68□□□□□ -1.98
PRE1YER012W PCF11P39081 626 aaPredicted RBP2.68□□□□□ -1.98
PRE1YER012W CIS3P47001 227 aa2.68□□□□□ -1.98
PRE1YER012W ASN2P49090 572 aaKnown RBP2.68□□□□□ -1.98
PRE1YER012W NBP35P52920 328 aa2.68□□□□□ -1.98
PRE1YER012W PCP1P53259 346 aa2.68□□□□□ -1.98
PRE1YER012W VAC7P53950 1165 aa2.68□□□□□ -1.98
PRE1YER012W PEX25Q02969 394 aa2.68□□□□□ -1.98
PRE1YER012W TAF9Q05027 157 aa2.68□□□□□ -1.98
PRE1YER012W SAM4Q08985 325 aaKnown RBP2.68□□□□□ -1.98
PRE1YER012W ATG29Q12092 213 aa2.68□□□□□ -1.98
PRE1YER012W OCA6Q12454 224 aa2.68□□□□□ -1.98
PRE1YER012W BRR2P32639 2163 aaKnown RBP2.67□□□□□ -1.98
PRE1YER012W JIP3O13555 125 aa2.67□□□□□ -1.98
PRE1YER012W TRP1P00912 224 aa2.67□□□□□ -1.98
PRE1YER012W CDC33P07260 213 aaKnown RBP2.67□□□□□ -1.98
PRE1YER012W RPL1AP0CX43 217 aaKnown RBP2.67□□□□□ -1.98
PRE1YER012W RPL1BP0CX44 217 aaKnown RBP2.67□□□□□ -1.98
PRE1YER012W HOM3P10869 527 aa2.67□□□□□ -1.98
PRE1YER012W SPO12P17123 173 aa2.67□□□□□ -1.98
PRE1YER012W CLC1P17891 233 aa2.67□□□□□ -1.98
PRE1YER012W ITR1P30605 584 aa2.67□□□□□ -1.98
PRE1YER012W TFB1P32776 642 aa2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms