RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	EXO84	P38261	753 aa		11.54	□□□□□ -0.56
NPL3	YDR432W	ANS1	P38832	159 aa		11.54	□□□□□ -0.56
NPL3	YDR432W	FAA2	P39518	744 aa		11.54	□□□□□ -0.56
NPL3	YDR432W	ECL1	P48235	211 aa		11.54	□□□□□ -0.56
NPL3	YDR432W	GPI1	P53306	609 aa		11.54	□□□□□ -0.56
NPL3	YDR432W	YDR249C	Q03787	373 aa		11.54	□□□□□ -0.56
NPL3	YDR432W	SPC2	Q04969	178 aa		11.54	□□□□□ -0.56
NPL3	YDR432W	FMP40	Q08968	688 aa	Predicted RBP	11.54	□□□□□ -0.56
NPL3	YDR432W	HTS1	P07263	546 aa	Known RBP	11.53	□□□□□ -0.56
NPL3	YDR432W	CBS1	P14066	229 aa		11.53	□□□□□ -0.56
NPL3	YDR432W	DPH5	P32469	300 aa	Predicted RBP	11.53	□□□□□ -0.56
NPL3	YDR432W	TEF4	P36008	412 aa	Known RBP	11.53	□□□□□ -0.56
NPL3	YDR432W	TOK1	P40310	691 aa		11.53	□□□□□ -0.56
NPL3	YDR432W	YIL169C	P40442	995 aa		11.53	□□□□□ -0.56
NPL3	YDR432W	ARF3	P40994	183 aa	RIP-Chip data	11.53	□□□□□ -0.56	not detected
NPL3	YDR432W	NAN1	Q02931	896 aa	Known RBP	11.53	□□□□□ -0.56
NPL3	YDR432W	ATG38	Q05789	226 aa	Known RBP	11.53	□□□□□ -0.56
NPL3	YDR432W	CDC39	P25655	2108 aa	Known RBP	11.53	□□□□□ -0.56
NPL3	YDR432W	CDC36	P06100	191 aa	Predicted RBP	11.52	□□□□□ -0.57
NPL3	YDR432W	KSS1	P14681	368 aa		11.52	□□□□□ -0.57
NPL3	YDR432W	MAK32	P23060	363 aa		11.52	□□□□□ -0.57
NPL3	YDR432W	RAD51	P25454	400 aa		11.52	□□□□□ -0.57
NPL3	YDR432W	TFC1	P32367	649 aa		11.52	□□□□□ -0.57
NPL3	YDR432W	ECM10	P39987	644 aa		11.52	□□□□□ -0.57
NPL3	YDR432W	LSG1	P53145	640 aa	Known RBP	11.52	□□□□□ -0.57
NPL3	YDR432W	RHO5	P53879	331 aa	Known RBP	11.52	□□□□□ -0.57
NPL3	YDR432W	NAT4	Q04751	285 aa		11.52	□□□□□ -0.57
NPL3	YDR432W	PSR1	Q07800	427 aa		11.52	□□□□□ -0.57
NPL3	YDR432W	PUT2	P07275	575 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	MSS18	P08593	268 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	HMG1	P12683	1054 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	APD1	P38281	316 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	RCK1	P38622	512 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	NSG1	P38837	291 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	SDC1	Q03323	175 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	RAD30	Q04049	632 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	URC2	Q04411	772 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	HRI1	Q05905	244 aa	Known RBP	11.51	□□□□□ -0.57
NPL3	YDR432W	BUR2	Q05949	395 aa		11.51	□□□□□ -0.57
NPL3	YDR432W	ADE5,7	P07244	802 aa	Known RBP	11.5	□□□□□ -0.57
NPL3	YDR432W	THR1	P17423	357 aa	Known RBP	11.5	□□□□□ -0.57
NPL3	YDR432W	TOD6	P34219	525 aa		11.5	□□□□□ -0.57
NPL3	YDR432W	MDJ1	P35191	511 aa		11.5	□□□□□ -0.57
NPL3	YDR432W	YHR218W	P38899	603 aa		11.5	□□□□□ -0.57
NPL3	YDR432W	REE1	P40893	198 aa		11.5	□□□□□ -0.57
NPL3	YDR432W	SMK1	P41808	388 aa		11.5	□□□□□ -0.57
NPL3	YDR432W	ARR1	Q06596	294 aa		11.5	□□□□□ -0.57
NPL3	YDR432W	HNT3	Q08702	217 aa		11.5	□□□□□ -0.57
NPL3	YDR432W	ULA1	Q12059	462 aa		11.5	□□□□□ -0.57
NPL3	YDR432W	CLB3	P24870	427 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	YEF1	P32622	495 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	YPT7	P32939	208 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	YMR262W	P38430	313 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	YJL193W	P39542	402 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	QDR2	P40474	542 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	MON1	P53129	644 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	INP1	Q03694	420 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	CRR1	Q05790	422 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	MFG1	Q07684	458 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	HER1	Q12276	1246 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	YOR214C	Q12282	236 aa		11.49	□□□□□ -0.57
NPL3	YDR432W	CBP6	P07253	162 aa	Predicted RBP	11.48	□□□□□ -0.57
NPL3	YDR432W	MNN9	P39107	395 aa	Known RBP	11.48	□□□□□ -0.57
NPL3	YDR432W	YER010C	P40011	234 aa		11.48	□□□□□ -0.57
NPL3	YDR432W	DIM1	P41819	318 aa	Known RBP	11.48	□□□□□ -0.57
NPL3	YDR432W	SVL3	Q03088	825 aa	Known RBP	11.48	□□□□□ -0.57
NPL3	YDR432W	RPS21B	Q3E754	87 aa	Known RBP	11.48	□□□□□ -0.57
NPL3	YDR432W	STE6	P12866	1290 aa		11.47	□□□□□ -0.57
NPL3	YDR432W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	11.47	□□□□□ -0.57	not detected
NPL3	YDR432W	TUL1	P36096	758 aa		11.47	□□□□□ -0.57
NPL3	YDR432W	RIX1	P38883	763 aa	Predicted RBP	11.47	□□□□□ -0.57
NPL3	YDR432W	ERP6	P53198	216 aa		11.47	□□□□□ -0.57
NPL3	YDR432W	YGR066C	P53242	292 aa		11.47	□□□□□ -0.57
NPL3	YDR432W	DBP6	P53734	629 aa	Known RBP	11.47	□□□□□ -0.57
NPL3	YDR432W	SEC16	P48415	2195 aa	Known RBP	11.47	□□□□□ -0.57
NPL3	YDR432W	HTA1	P04911	132 aa	Known RBP	11.46	□□□□□ -0.57
NPL3	YDR432W	MER1	P16523	270 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	NFS1	P25374	497 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	PEX3	P28795	441 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	SKG1	P36169	355 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	MGE1	P38523	228 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	PRY1	P47032	299 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	YGR016W	P53209	190 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	COS6	P53344	381 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	MKC7	P53379	596 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	DCP2	P53550	970 aa	Known RBP	11.46	□□□□□ -0.57
NPL3	YDR432W	UGO1	Q03327	502 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	PLB2	Q03674	706 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	YKU80	Q04437	629 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	GPI11	Q06636	219 aa		11.46	□□□□□ -0.57
NPL3	YDR432W	YOR097C	Q12274	175 aa	Predicted RBP	11.46	□□□□□ -0.57
NPL3	YDR432W	CAR2	P07991	424 aa	Known RBP	11.45	□□□□□ -0.58
NPL3	YDR432W	RPP1B	P10622	106 aa	Known RBP	11.45	□□□□□ -0.58
NPL3	YDR432W	RPS1B	P23248	255 aa	Known RBP	11.45	□□□□□ -0.58
NPL3	YDR432W	LHP1	P33399	275 aa	Known RBP	11.45	□□□□□ -0.58
NPL3	YDR432W	ZTA1	P38230	334 aa	Known RBP	11.45	□□□□□ -0.58
NPL3	YDR432W	RIM13	Q03792	727 aa		11.45	□□□□□ -0.58
NPL3	YDR432W	RAD7	P06779	565 aa		11.44	□□□□□ -0.58
NPL3	YDR432W	PDX1	P16451	410 aa		11.44	□□□□□ -0.58
NPL3	YDR432W	EHD3	P28817	500 aa		11.44	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms