RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W PDC2P32896 925 aa2.01□□□□□ -2.09
SHE9YDR393W SWE1P32944 819 aa2.01□□□□□ -2.09
SHE9YDR393W YAP3P38749 330 aa2.01□□□□□ -2.09
SHE9YDR393W LSM5P40089 93 aaKnown RBP2.01□□□□□ -2.09
SHE9YDR393W YIR035CP40579 254 aa2.01□□□□□ -2.09
SHE9YDR393W SPC19Q03954 165 aa2.01□□□□□ -2.09
SHE9YDR393W FCY22Q12119 530 aa2.01□□□□□ -2.09
SHE9YDR393W TOP2P06786 1428 aaKnown RBP2.01□□□□□ -2.09
SHE9YDR393W ADE4P04046 510 aaKnown RBP2□□□□□ -2.09
SHE9YDR393W FUN26P31381 517 aa2□□□□□ -2.09
SHE9YDR393W STB1P42845 420 aa2□□□□□ -2.09
SHE9YDR393W RPT4P53549 437 aaKnown RBP2□□□□□ -2.09
SHE9YDR393W BNI5P53890 448 aaKnown RBP2□□□□□ -2.09
SHE9YDR393W MMT1Q03218 510 aa2□□□□□ -2.09
SHE9YDR393W ACL4Q03771 387 aa2□□□□□ -2.09
SHE9YDR393W NUP170P38181 1502 aa2□□□□□ -2.09
SHE9YDR393W SSN2P38931 1420 aa2□□□□□ -2.09
SHE9YDR393W TY1B-HO13535 1793 aa2□□□□□ -2.09
SHE9YDR393W TY1B-DR5P0C2I2 1755 aa2□□□□□ -2.09
SHE9YDR393W TY1B-DR6P0C2I3 1755 aa2□□□□□ -2.09
SHE9YDR393W TY1B-LR2P0C2I5 1755 aa2□□□□□ -2.09
SHE9YDR393W TY1B-LR3P0C2I6 1755 aaKnown RBP2□□□□□ -2.09
SHE9YDR393W TY1B-PR1P0C2I9 1755 aaKnown RBP2□□□□□ -2.09
SHE9YDR393W TY1B-PR2P0C2J0 1756 aa2□□□□□ -2.09
SHE9YDR393W TY1B-PR3P0C2J1 1755 aaKnown RBP2□□□□□ -2.09
SHE9YDR393W TY1B-JR1P47098 1755 aa2□□□□□ -2.09
SHE9YDR393W TY1B-ML2Q03434 1755 aaKnown RBP2□□□□□ -2.09
SHE9YDR393W TY1B-ER1Q03612 1755 aa2□□□□□ -2.09
SHE9YDR393W TY1B-ML1Q04711 1755 aaKnown RBP2□□□□□ -2.09
SHE9YDR393W TY1B-GR2Q12269 1755 aa2□□□□□ -2.09
SHE9YDR393W TY1B-OLQ12273 1755 aa2□□□□□ -2.09
SHE9YDR393W TY1B-PLQ12414 1755 aaKnown RBP2□□□□□ -2.09
SHE9YDR393W ADK2P26364 225 aa1.99□□□□□ -2.09
SHE9YDR393W NIP1P32497 812 aaKnown RBP1.99□□□□□ -2.09
SHE9YDR393W CBF5P33322 483 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
SHE9YDR393W AST1P35183 429 aa1.99□□□□□ -2.09
SHE9YDR393W CAK1P43568 368 aaPredicted RBP1.99□□□□□ -2.09
SHE9YDR393W SEH1P53011 349 aaKnown RBP1.99□□□□□ -2.09
SHE9YDR393W OCA2P53949 197 aa1.99□□□□□ -2.09
SHE9YDR393W STD1Q02794 444 aa1.99□□□□□ -2.09
SHE9YDR393W VPS54Q12071 889 aa1.99□□□□□ -2.09
SHE9YDR393W YDL199CQ12407 687 aa1.99□□□□□ -2.09
SHE9YDR393W MTR10Q99189 972 aa1.99□□□□□ -2.09
SHE9YDR393W ISN1Q99312 450 aa1.99□□□□□ -2.09
SHE9YDR393W TY2B-BQ12491 1770 aa1.99□□□□□ -2.09
SHE9YDR393W NTE1Q04958 1679 aa1.99□□□□□ -2.09
SHE9YDR393W SOL2P37262 315 aa1.98□□□□□ -2.09
SHE9YDR393W SLM4P38247 162 aa1.98□□□□□ -2.09
SHE9YDR393W YPS6P40583 537 aa1.98□□□□□ -2.09
SHE9YDR393W YJL144WP47009 104 aa1.98□□□□□ -2.09
SHE9YDR393W ZRG17P53735 605 aa1.98□□□□□ -2.09
SHE9YDR393W RPN9Q04062 393 aaKnown RBP1.98□□□□□ -2.09
SHE9YDR393W YHC1Q05900 231 aaKnown RBP1.98□□□□□ -2.09
SHE9YDR393W MMR1Q06324 491 aa1.98□□□□□ -2.09
SHE9YDR393W MCT1Q12283 360 aa1.98□□□□□ -2.09
SHE9YDR393W DOP1Q03921 1698 aa1.98□□□□□ -2.09
SHE9YDR393W TSC11P40061 1430 aa1.98□□□□□ -2.09
SHE9YDR393W SNT2P53127 1403 aa1.98□□□□□ -2.09
SHE9YDR393W YSP2Q06681 1438 aa1.98□□□□□ -2.09
SHE9YDR393W PDR15Q04182 1529 aaKnown RBP1.98□□□□□ -2.09
SHE9YDR393W PDX1P16451 410 aa1.98□□□□□ -2.09
SHE9YDR393W GIT1P25346 518 aa1.98□□□□□ -2.09
SHE9YDR393W URA7P28274 579 aaKnown RBP1.98□□□□□ -2.09
SHE9YDR393W YER079WP40052 210 aaKnown RBP1.98□□□□□ -2.09
SHE9YDR393W AIP1P46680 615 aaKnown RBP1.98□□□□□ -2.09
SHE9YDR393W RRP46P53256 223 aaPredicted RBP1.98□□□□□ -2.09
SHE9YDR393W PRP42Q03776 544 aaKnown RBP1.98□□□□□ -2.09
SHE9YDR393W AEP3Q12089 606 aa1.98□□□□□ -2.09
SHE9YDR393W RUP1Q12242 671 aa1.98□□□□□ -2.09
SHE9YDR393W HTZ1Q12692 134 aaKnown RBP1.98□□□□□ -2.09
SHE9YDR393W ATP1P07251 545 aaKnown RBP1.97□□□□□ -2.09
SHE9YDR393W ERV1P27882 189 aa1.97□□□□□ -2.09
SHE9YDR393W MSP1P28737 362 aa1.97□□□□□ -2.09
SHE9YDR393W SMP1P38128 452 aa1.97□□□□□ -2.09
SHE9YDR393W OLA1P38219 394 aaKnown RBP1.97□□□□□ -2.09
SHE9YDR393W ECM34P38728 170 aa1.97□□□□□ -2.09
SHE9YDR393W PIB2P53191 635 aa1.97□□□□□ -2.09
SHE9YDR393W ERB1Q04660 807 aaKnown RBP1.97□□□□□ -2.09
SHE9YDR393W TY1B-DR3Q99231 1755 aa1.96□□□□□ -2.09
SHE9YDR393W NUP157P40064 1391 aaKnown RBP1.96□□□□□ -2.1
SHE9YDR393W COX3P00420 269 aa1.96□□□□□ -2.1
SHE9YDR393W DST1P07273 309 aa1.96□□□□□ -2.1
SHE9YDR393W ASP3-2P0CX77 362 aa1.96□□□□□ -2.1
SHE9YDR393W ASP3-3P0CX78 362 aa1.96□□□□□ -2.1
SHE9YDR393W ASP3-4P0CX79 362 aa1.96□□□□□ -2.1
SHE9YDR393W ASP3-1P0CZ17 362 aa1.96□□□□□ -2.1
SHE9YDR393W CLB1P24868 471 aa1.96□□□□□ -2.1
SHE9YDR393W SRB2P34162 210 aa1.96□□□□□ -2.1
SHE9YDR393W ASC1P38011 319 aaKnown RBP1.96□□□□□ -2.1
SHE9YDR393W VHS2P40463 436 aa1.96□□□□□ -2.1
SHE9YDR393W TOM22P49334 152 aa1.96□□□□□ -2.1
SHE9YDR393W PDR10P51533 1564 aa1.95□□□□□ -2.1
SHE9YDR393W SSC1P0CS90 654 aaKnown RBP1.95□□□□□ -2.1
SHE9YDR393W ARO3P14843 370 aaKnown RBP1.95□□□□□ -2.1
SHE9YDR393W CPR2P23285 205 aa1.95□□□□□ -2.1
SHE9YDR393W HSP104P31539 908 aaKnown RBP1.95□□□□□ -2.1
SHE9YDR393W DBF4P32325 704 aa1.95□□□□□ -2.1
SHE9YDR393W RIM1P32445 135 aaKnown RBP1.95□□□□□ -2.1
SHE9YDR393W RAD5P32849 1169 aaPredicted RBP1.95□□□□□ -2.1
SHE9YDR393W WSC4P38739 605 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms