RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W PHO84P25297 587 aaKnown RBP3.04□□□□□ -1.92
UBC9YDL064W NUP2P32499 720 aa3.04□□□□□ -1.92
UBC9YDL064W SPT10P35208 640 aa3.04□□□□□ -1.92
UBC9YDL064W OXA1P39952 402 aa3.04□□□□□ -1.92
UBC9YDL064W UTP18P40362 594 aaPredicted RBP3.04□□□□□ -1.92
UBC9YDL064W CTK3P46963 296 aaPredicted RBP3.04□□□□□ -1.92
UBC9YDL064W SHE10P53075 577 aa3.04□□□□□ -1.92
UBC9YDL064W AIM33Q04516 312 aa3.04□□□□□ -1.92
UBC9YDL064W PRM6Q04705 352 aa3.04□□□□□ -1.92
UBC9YDL064W LOT6Q07923 191 aa3.04□□□□□ -1.92
UBC9YDL064W JID1Q12350 301 aa3.04□□□□□ -1.92
UBC9YDL064W YDL199CQ12407 687 aa3.04□□□□□ -1.92
UBC9YDL064W STE3P06783 470 aa3.03□□□□□ -1.92
UBC9YDL064W RPS16AP0CX51 143 aaKnown RBP3.03□□□□□ -1.92
UBC9YDL064W RPS16BP0CX52 143 aaKnown RBP3.03□□□□□ -1.92
UBC9YDL064W SPR1P32603 445 aa3.03□□□□□ -1.92
UBC9YDL064W RAD5P32849 1169 aaPredicted RBP3.03□□□□□ -1.92
UBC9YDL064W SEC27P41811 889 aaKnown RBP3.03□□□□□ -1.92
UBC9YDL064W YGR016WP53209 190 aa3.03□□□□□ -1.92
UBC9YDL064W SHY1P53266 389 aa3.03□□□□□ -1.92
UBC9YDL064W RET3P53600 189 aa3.03□□□□□ -1.92
UBC9YDL064W YMR027WQ04371 470 aa3.03□□□□□ -1.92
UBC9YDL064W SAG1P20840 650 aa3.02□□□□□ -1.93
UBC9YDL064W PCL1P24867 279 aa3.02□□□□□ -1.93
UBC9YDL064W CHA1P25379 360 aaKnown RBP3.02□□□□□ -1.93
UBC9YDL064W MSK1P32048 576 aa3.02□□□□□ -1.93
UBC9YDL064W SPO23P33757 523 aa3.02□□□□□ -1.93
UBC9YDL064W UTH1P36135 365 aa3.02□□□□□ -1.93
UBC9YDL064W HEM14P40012 539 aa3.02□□□□□ -1.93
UBC9YDL064W KEG1P43614 200 aa3.02□□□□□ -1.93
UBC9YDL064W CIN2P46670 268 aa3.02□□□□□ -1.93
UBC9YDL064W CUE3P53137 624 aaKnown RBP3.02□□□□□ -1.93
UBC9YDL064W MPS2P53159 387 aa3.02□□□□□ -1.93
UBC9YDL064W YET2Q04210 160 aa3.02□□□□□ -1.93
UBC9YDL064W YHC1Q05900 231 aaKnown RBP3.02□□□□□ -1.93
UBC9YDL064W LIP2Q06005 328 aa3.02□□□□□ -1.93
UBC9YDL064W MCT1Q12283 360 aa3.02□□□□□ -1.93
UBC9YDL064W PSY3Q12318 242 aa3.02□□□□□ -1.93
UBC9YDL064W AIM45Q12480 344 aaKnown RBP3.02□□□□□ -1.93
UBC9YDL064W AAT2P23542 418 aaKnown RBP3.01□□□□□ -1.93
UBC9YDL064W RDS1P25611 832 aa3.01□□□□□ -1.93
UBC9YDL064W FUN26P31381 517 aa3.01□□□□□ -1.93
UBC9YDL064W GDT1P38301 280 aaPredicted RBP3.01□□□□□ -1.93
UBC9YDL064W CAJ1P39101 391 aa3.01□□□□□ -1.93
UBC9YDL064W YNL208WP40159 199 aaKnown RBP3.01□□□□□ -1.93
UBC9YDL064W LYS12P40495 371 aaKnown RBP3.01□□□□□ -1.93
UBC9YDL064W SNL1P40548 159 aa3.01□□□□□ -1.93
UBC9YDL064W NAS2P40555 220 aa3.01□□□□□ -1.93
UBC9YDL064W CLD1P53264 445 aa3.01□□□□□ -1.93
UBC9YDL064W AQR1P53943 586 aa3.01□□□□□ -1.93
UBC9YDL064W YLH47Q06493 454 aa3.01□□□□□ -1.93
UBC9YDL064W DET1Q99288 334 aaKnown RBP3.01□□□□□ -1.93
UBC9YDL064W FSH3Q99369 266 aa3.01□□□□□ -1.93
UBC9YDL064W SPT7P35177 1332 aa3□□□□□ -1.93
UBC9YDL064W YBL028CP38202 106 aa3□□□□□ -1.93
UBC9YDL064W PFS1P38872 237 aa3□□□□□ -1.93
UBC9YDL064W TIM17P39515 158 aa3□□□□□ -1.93
UBC9YDL064W EFM3P47163 339 aa3□□□□□ -1.93
UBC9YDL064W ALF1P53904 254 aa3□□□□□ -1.93
UBC9YDL064W TSA2Q04120 196 aa3□□□□□ -1.93
UBC9YDL064W YDL114WQ07530 308 aa3□□□□□ -1.93
UBC9YDL064W SHS1Q07657 551 aa3□□□□□ -1.93
UBC9YDL064W CMS1Q07897 291 aaKnown RBP3□□□□□ -1.93
UBC9YDL064W PGC1Q08959 321 aa3□□□□□ -1.93
UBC9YDL064W PCL9Q12477 304 aa3□□□□□ -1.93
UBC9YDL064W HTZ1Q12692 134 aaKnown RBP3□□□□□ -1.93
UBC9YDL064W MEX67Q99257 599 aaKnown RBP3□□□□□ -1.93
UBC9YDL064W PRR1P28708 518 aa2.99□□□□□ -1.93
UBC9YDL064W ZUO1P32527 433 aaKnown RBP2.99□□□□□ -1.93
UBC9YDL064W SMI1P32566 505 aa2.99□□□□□ -1.93
UBC9YDL064W RPA34P47006 233 aaPredicted RBP2.99□□□□□ -1.93
UBC9YDL064W REX2P54964 269 aaKnown RBP2.99□□□□□ -1.93
UBC9YDL064W HAL1Q01766 294 aa2.99□□□□□ -1.93
UBC9YDL064W SMP3Q04174 516 aa2.99□□□□□ -1.93
UBC9YDL064W RPS18AP0CX55 146 aaKnown RBP2.98□□□□□ -1.93
UBC9YDL064W RPS18BP0CX56 146 aaPredicted RBP2.98□□□□□ -1.93
UBC9YDL064W MAS2P11914 482 aa2.98□□□□□ -1.93
UBC9YDL064W CKI1P20485 582 aa2.98□□□□□ -1.93
UBC9YDL064W FAR1P21268 830 aa2.98□□□□□ -1.93
UBC9YDL064W MRPL8P22353 238 aa2.98□□□□□ -1.93
UBC9YDL064W GRR1P24814 1151 aa2.98□□□□□ -1.93
UBC9YDL064W CDC50P25656 391 aa2.98□□□□□ -1.93
UBC9YDL064W VAM7P32912 316 aa2.98□□□□□ -1.93
UBC9YDL064W OM14P38325 134 aa2.98□□□□□ -1.93
UBC9YDL064W ATG7P38862 630 aa2.98□□□□□ -1.93
UBC9YDL064W LCP5P40079 357 aaPredicted RBP2.98□□□□□ -1.93
UBC9YDL064W YER186CP40101 306 aa2.98□□□□□ -1.93
UBC9YDL064W PGU1P47180 361 aa2.98□□□□□ -1.93
UBC9YDL064W YGL039WP53183 348 aaKnown RBP2.98□□□□□ -1.93
UBC9YDL064W SKI8Q02793 397 aaPredicted RBP2.98□□□□□ -1.93
UBC9YDL064W YOL075CQ08234 1294 aa2.98□□□□□ -1.93
UBC9YDL064W MAS1P10507 462 aa2.97□□□□□ -1.93
UBC9YDL064W THR4P16120 514 aaKnown RBP2.97□□□□□ -1.93
UBC9YDL064W TPM1P17536 199 aaKnown RBP2.97□□□□□ -1.93
UBC9YDL064W SOD1P00445 154 aaKnown RBP2.96□□□□□ -1.94
UBC9YDL064W RPS14AP06367 137 aaKnown RBP2.96□□□□□ -1.94
UBC9YDL064W PRB1P09232 635 aa2.96□□□□□ -1.94
UBC9YDL064W TAL1P15019 335 aaKnown RBP2.96□□□□□ -1.94
UBC9YDL064W EFB1P32471 206 aaKnown RBP2.96□□□□□ -1.94
UBC9YDL064W SSE1P32589 693 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 86.8 ms