RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 SKAP1Q86WV1 359 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 CMTR2Q8IYT2 770 aaKnown RBP12.16□□□□□ -0.46
PNN-203ENST00000554117 FAM177A1Q8N128 213 aaPredicted RBP12.16□□□□□ -0.46
PNN-203ENST00000554117 KCNB2Q92953 911 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 TEKT3Q9BXF9 490 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 C1orf112Q9NSG2 853 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 PADI3Q9ULW8 664 aa12.16□□□□□ -0.46
PNN-203ENST00000554117 FSD2A1L4K1 749 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 FAM86B1E9PN63 330 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 MARCH6O60337 910 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 DKC1O60832 514 aaKnown RBP eCLIP12.15□□□□□ -0.46
PNN-203ENST00000554117 FAM86B2P0C5J1 330 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 ZSCAN20P17040 1043 aaPredicted RBP12.15□□□□□ -0.46
PNN-203ENST00000554117 KCNA5P22460 613 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 SSTR3P32745 418 aaPredicted RBP12.15□□□□□ -0.46
PNN-203ENST00000554117 BMPR1AP36894 532 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 JAK3P52333 1124 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 MARCH8Q5T0T0 291 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 GALNT17Q6IS24 598 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 TRMT1LQ7Z2T5 733 aaKnown RBP12.15□□□□□ -0.46
PNN-203ENST00000554117 CCDC60Q8IWA6 550 aaPredicted RBP12.15□□□□□ -0.46
PNN-203ENST00000554117 TRAPPC12Q8WVT3 735 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 AKT3Q9Y243 479 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 TELO2Q9Y4R8 837 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 PCDHB12Q9Y5F1 795 aa12.15□□□□□ -0.46
PNN-203ENST00000554117 IGKV6D-21A0A0A0MT36 114 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 C5orf67F2Z3F1 127 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 HOXA2O43364 376 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 DGKIO75912 1065 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 PDIA3P30101 505 aaKnown RBP12.14□□□□□ -0.47
PNN-203ENST00000554117 DNM2P50570 870 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 CDC42EP1Q00587 391 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
PNN-203ENST00000554117 COL9A3Q14050 684 aaPredicted RBP12.14□□□□□ -0.47
PNN-203ENST00000554117 ANKRD1Q15327 319 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 CSPP1Q1MSJ5 1256 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 LEXMQ3ZCV2 418 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 LRCH2Q5VUJ6 765 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 SPRED2Q7Z698 418 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 ABI1Q8IZP0 508 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 P2RX5Q93086 422 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 ZNF274Q96GC6 653 aaPredicted RBP12.14□□□□□ -0.47
PNN-203ENST00000554117 PCYT2Q99447 389 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 NAP1L4Q99733 375 aaKnown RBP12.14□□□□□ -0.47
PNN-203ENST00000554117 AGXT2Q9BYV1 514 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 TM6SF1Q9BZW5 370 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 FAM217BQ9NTX9 383 aaPredicted RBP12.14□□□□□ -0.47
PNN-203ENST00000554117 CLDND1Q9NY35 253 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 VPS54Q9P1Q0 977 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 GABBR1Q9UBS5 961 aa12.14□□□□□ -0.47
PNN-203ENST00000554117 BRWD1Q9NSI6 2320 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 IGLV3-22A0A075B6J6 115 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 CCDC194A0A1B0GVG4 234 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 CHMP2AO43633 222 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 SRGAP2BP0DMP2 458 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 CIITAP33076 1130 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 SARSP49591 514 aaKnown RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 CRYBB1P53674 252 aaPredicted RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 TBC1D8BQ0IIM8 1120 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 BMS1Q14692 1282 aaKnown RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 PAN2Q504Q3 1202 aaKnown RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 PTCRAQ6ISU1 281 aaPredicted RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 MIER3Q7Z3K6 550 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 RDM1Q8NG50 284 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 WASF1Q92558 559 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 PABPC5Q96DU9 382 aaKnown RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 POP1Q99575 1024 aaKnown RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 RIT2Q99578 217 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 JPH2Q9BR39 696 aaPredicted RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 DISC1Q9NRI5 854 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 PCDHA4Q9UN74 947 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 HCN4Q9Y3Q4 1203 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
PNN-203ENST00000554117 NCOR1O75376 2440 aa12.13□□□□□ -0.47
PNN-203ENST00000554117 MTCL1Q9Y4B5 1905 aaKnown RBP12.12□□□□□ -0.47
PNN-203ENST00000554117 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.12□□□□□ -0.47
PNN-203ENST00000554117 CCNE2O96020 404 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 OATP04181 439 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 STK3Q13188 491 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 NONOQ15233 471 aaKnown RBP eCLIP12.12□□□□□ -0.47
PNN-203ENST00000554117 PKN1Q16512 942 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 TCEAL5Q5H9L2 206 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 EFCAB12Q6NXP0 572 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 SLC24A5Q71RS6 500 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 KRT25Q7Z3Z0 450 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 EXOC8Q8IYI6 725 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 BLIDQ8IZY5 108 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 TBCKQ8TEA7 893 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 CLP1Q92989 425 aaKnown RBP12.12□□□□□ -0.47
PNN-203ENST00000554117 UPF3BQ9BZI7 483 aaKnown RBP12.12□□□□□ -0.47
PNN-203ENST00000554117 INO80BQ9C086 356 aaPredicted RBP12.12□□□□□ -0.47
PNN-203ENST00000554117 AGO3Q9H9G7 860 aaKnown RBP12.12□□□□□ -0.47
PNN-203ENST00000554117 ATP6V0A4Q9HBG4 840 aa12.12□□□□□ -0.47
PNN-203ENST00000554117 NCOA5Q9HCD5 579 aaKnown RBP12.12□□□□□ -0.47
PNN-203ENST00000554117 CARNS1A5YM72 827 aa12.11□□□□□ -0.47
PNN-203ENST00000554117 MMP1P03956 469 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms