RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 MAPRE3Q9UPY8 281 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 DHX29Q7Z478 1369 aaKnown RBP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 PLA2R1Q13018 1463 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 IQSEC2Q5JU85 1478 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 LRRC9Q6ZRR7 1453 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 CFAP65Q6ZU64 1925 aaKnown RBP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 DNMT1P26358 1616 aaKnown RBP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 LTBP4Q8N2S1 1624 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 EIF2AK4Q9P2K8 1649 aaKnown RBP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 PTPRKQ15262 1439 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 VPS8Q8N3P4 1428 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 CROCC2H7BZ55 1655 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 MAST1Q9Y2H9 1570 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 A2ML1A8K2U0 1454 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 A0A1B0GTL3 188 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 FAM83GA6ND36 823 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 ALG1L2C9J202 215 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 PEX14O75381 377 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 SOD2P04179 222 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 COL6A2P12110 1019 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 DLX2Q07687 328 aaPredicted RBP5.73□□□□□ -1.49
LINC00393-202ENST00000452852 STRN3Q13033 797 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 PCBP1Q15365 356 aaKnown RBP eCLIP5.73□□□□□ -1.49
LINC00393-202ENST00000452852 LHFPL2Q6ZUX7 228 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 DDX46Q7L014 1031 aaKnown RBP5.73□□□□□ -1.49
LINC00393-202ENST00000452852 OTOP3Q7RTS5 596 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 MAMDC2Q7Z304 686 aaPredicted RBP5.73□□□□□ -1.49
LINC00393-202ENST00000452852 SAPCD2Q86UD0 394 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 ZNF526Q8TF50 670 aaPredicted RBP5.73□□□□□ -1.49
LINC00393-202ENST00000452852 DDX1Q92499 740 aaKnown RBP5.73□□□□□ -1.49
LINC00393-202ENST00000452852 ZBTB8AQ96BR9 441 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 KCNC2Q96PR1 638 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 GORASP1Q9BQQ3 440 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 SMOC1Q9H4F8 434 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 IPPKQ9H8X2 491 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 MAGEC2Q9UBF1 373 aaPredicted RBP5.73□□□□□ -1.49
LINC00393-202ENST00000452852 CEP152O94986 1710 aa5.73□□□□□ -1.49
LINC00393-202ENST00000452852 RNF17Q9BXT8 1623 aaKnown RBP5.73□□□□□ -1.49
LINC00393-202ENST00000452852 PZPP20742 1482 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 TNRQ92752 1358 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 FAM47E-STBD1D6RA91 191 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 KRIT1O00522 736 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 AQP7O14520 342 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 SLC27A2O14975 620 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 EYA4O95677 639 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 NEK4P51957 841 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 SMAD4Q13485 552 aaKnown RBP5.72□□□□□ -1.49
LINC00393-202ENST00000452852 LRRC41Q15345 812 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 TTF1Q15361 905 aaPredicted RBP5.72□□□□□ -1.49
LINC00393-202ENST00000452852 CR1LQ2VPA4 569 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 FGD2Q7Z6J4 655 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 STK32CQ86UX6 486 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 ZC3H18Q86VM9 953 aaKnown RBP5.72□□□□□ -1.49
LINC00393-202ENST00000452852 CCDC146Q8IYE0 955 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 PHOSPHO1Q8TCT1 267 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 YIPF4Q9BSR8 244 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 ALG1Q9BT22 464 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 ZCCHC4Q9H5U6 513 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 SLC52A2Q9HAB3 445 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 TRIM39Q9HCM9 518 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 PARD6AQ9NPB6 346 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 SFMBT1Q9UHJ3 866 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 TNPO3Q9Y5L0 923 aaKnown RBP5.72□□□□□ -1.49
LINC00393-202ENST00000452852 MAP3K1Q13233 1512 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 SPATA31D1Q6ZQQ2 1576 aa5.72□□□□□ -1.49
LINC00393-202ENST00000452852 TCOF1Q13428 1488 aaKnown RBP5.71□□□□□ -1.49
LINC00393-202ENST00000452852 NKRFO15226 690 aaKnown RBP eCLIP5.71□□□□□ -1.5
LINC00393-202ENST00000452852 TPD52L2O43399 206 aaKnown RBP5.71□□□□□ -1.5
LINC00393-202ENST00000452852 MAFKO60675 156 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 GNAT1P11488 350 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 TBX4P57082 545 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 GABREP78334 506 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 NKX3-2P78367 333 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 ZNF460Q14592 562 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 CYP4F22Q6NT55 531 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 LIPIQ6XZB0 460 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 BRAPQ7Z569 592 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 MTDHQ86UE4 582 aaKnown RBP5.71□□□□□ -1.5
LINC00393-202ENST00000452852 RBM12BQ8IXT5 1001 aaKnown RBP5.71□□□□□ -1.5
LINC00393-202ENST00000452852 LINC00482Q8N8I6 264 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 SYT8Q8NBV8 401 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 CLEC4DQ8WXI8 215 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 TOE1Q96GM8 510 aaKnown RBP5.71□□□□□ -1.5
LINC00393-202ENST00000452852 C11orf84Q9BUA3 381 aaPredicted RBP5.71□□□□□ -1.5
LINC00393-202ENST00000452852 NGRNQ9NPE2 291 aaKnown RBP5.71□□□□□ -1.5
LINC00393-202ENST00000452852 SPATA6Q9NWH7 488 aaPredicted RBP5.71□□□□□ -1.5
LINC00393-202ENST00000452852 DTLQ9NZJ0 730 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 ASH2LQ9UBL3 628 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 RIPOR2Q9Y4F9 1068 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 PCDHA8Q9Y5H6 950 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 IQGAP1P46940 1657 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 UGGT1Q9NYU2 1555 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 NLRP1Q9C000 1473 aa5.71□□□□□ -1.5
LINC00393-202ENST00000452852 PTPN23Q9H3S7 1636 aa5.7□□□□□ -1.5
LINC00393-202ENST00000452852 DISP3Q9P2K9 1392 aa5.7□□□□□ -1.5
LINC00393-202ENST00000452852 DUOX2Q9NRD8 1548 aa5.7□□□□□ -1.5
LINC00393-202ENST00000452852 SH3D21A4FU49 640 aa5.7□□□□□ -1.5
LINC00393-202ENST00000452852 KPNA6O60684 536 aa5.7□□□□□ -1.5
LINC00393-202ENST00000452852 LRG1P02750 347 aa5.7□□□□□ -1.5
LINC00393-202ENST00000452852 SLURP1P55000 103 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms