RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A YGR067CP53243 804 aa14.54□□□□□ -0.08
TRN1tP(UGG)A PEX25Q02969 394 aa14.54□□□□□ -0.08
TRN1tP(UGG)A ARO10Q06408 635 aa14.54□□□□□ -0.08
TRN1tP(UGG)A DTD1Q07648 150 aaKnown RBP14.54□□□□□ -0.08
TRN1tP(UGG)A MEU1Q07938 337 aaKnown RBP RIP-Chip data14.54□□□□□ -0.08not detected
TRN1tP(UGG)A TAF3Q12297 353 aa14.54□□□□□ -0.08
TRN1tP(UGG)A RPS21BQ3E754 87 aaKnown RBP14.54□□□□□ -0.08
TRN1tP(UGG)A YSF3P0C074 85 aaPredicted RBP14.53□□□□□ -0.08
TRN1tP(UGG)A SEC2P17065 759 aa14.53□□□□□ -0.08
TRN1tP(UGG)A STP22P25604 385 aa14.53□□□□□ -0.08
TRN1tP(UGG)A UBC8P28263 218 aa14.53□□□□□ -0.08
TRN1tP(UGG)A GSH1P32477 678 aa14.53□□□□□ -0.08
TRN1tP(UGG)A PZF1P39933 429 aa14.53□□□□□ -0.08
TRN1tP(UGG)A SNL1P40548 159 aa14.53□□□□□ -0.08
TRN1tP(UGG)A MET28P40573 187 aa14.53□□□□□ -0.08
TRN1tP(UGG)A APS3P47064 194 aa14.53□□□□□ -0.08
TRN1tP(UGG)A YJR115WP47152 169 aa14.53□□□□□ -0.08
TRN1tP(UGG)A YJR142WP47173 342 aa14.53□□□□□ -0.08
TRN1tP(UGG)A RNH70P53331 553 aa14.53□□□□□ -0.08
TRN1tP(UGG)A MTQ1P53944 314 aa14.53□□□□□ -0.08
TRN1tP(UGG)A VIK1Q12045 647 aa14.53□□□□□ -0.08
TRN1tP(UGG)A STE6P12866 1290 aa14.52□□□□□ -0.09
TRN1tP(UGG)A FBA1P14540 359 aaKnown RBP14.52□□□□□ -0.09
TRN1tP(UGG)A LST4P34239 828 aa14.52□□□□□ -0.09
TRN1tP(UGG)A IFA38P38286 347 aa14.52□□□□□ -0.09
TRN1tP(UGG)A BAP3P41815 604 aa14.52□□□□□ -0.09
TRN1tP(UGG)A GPI8P49018 411 aa14.52□□□□□ -0.09
TRN1tP(UGG)A YMR210WQ03649 449 aa14.52□□□□□ -0.09
TRN1tP(UGG)A REH1Q06709 432 aa14.52□□□□□ -0.09
TRN1tP(UGG)A MRX4Q12467 430 aa14.52□□□□□ -0.09
TRN1tP(UGG)A RPL20AP0CX23 172 aaKnown RBP14.51□□□□□ -0.09
TRN1tP(UGG)A RPL20BP0CX24 172 aaPredicted RBP14.51□□□□□ -0.09
TRN1tP(UGG)A APE2P32454 952 aaKnown RBP14.51□□□□□ -0.09
TRN1tP(UGG)A PEP12P32854 288 aa14.51□□□□□ -0.09
TRN1tP(UGG)A LOT5P34234 306 aa14.51□□□□□ -0.09
TRN1tP(UGG)A YOR062CP36025 268 aa14.51□□□□□ -0.09
TRN1tP(UGG)A LCL3P53153 274 aa14.51□□□□□ -0.09
TRN1tP(UGG)A YDR239CQ03780 787 aa14.51□□□□□ -0.09
TRN1tP(UGG)A YCK1P23291 538 aa14.5□□□□□ -0.09
TRN1tP(UGG)A BUD14P27637 709 aa14.5□□□□□ -0.09
TRN1tP(UGG)A RPN2P32565 945 aaKnown RBP14.5□□□□□ -0.09
TRN1tP(UGG)A HCS1P34243 683 aa14.5□□□□□ -0.09
TRN1tP(UGG)A THO1P40040 218 aaKnown RBP14.5□□□□□ -0.09
TRN1tP(UGG)A SNO3P43544 222 aa14.5□□□□□ -0.09
TRN1tP(UGG)A CAK1P43568 368 aaPredicted RBP14.5□□□□□ -0.09
TRN1tP(UGG)A BIT61P47041 543 aa14.5□□□□□ -0.09
TRN1tP(UGG)A TPS1Q00764 495 aaKnown RBP14.5□□□□□ -0.09
TRN1tP(UGG)A CTL1Q03220 320 aaKnown RBP14.5□□□□□ -0.09
TRN1tP(UGG)A CDC4P07834 779 aa14.49□□□□□ -0.09
TRN1tP(UGG)A MOD5P07884 428 aa14.49□□□□□ -0.09
TRN1tP(UGG)A PET9P18239 318 aaKnown RBP14.49□□□□□ -0.09
TRN1tP(UGG)A TOD6P34219 525 aa14.49□□□□□ -0.09
TRN1tP(UGG)A SYF2P53277 215 aaPredicted RBP14.49□□□□□ -0.09
TRN1tP(UGG)A DCP2P53550 970 aaKnown RBP14.49□□□□□ -0.09
TRN1tP(UGG)A SWP1Q02795 286 aa14.49□□□□□ -0.09
TRN1tP(UGG)A INP1Q03694 420 aa14.49□□□□□ -0.09
TRN1tP(UGG)A ERF2Q06551 359 aa14.49□□□□□ -0.09
TRN1tP(UGG)A YPR097WQ06839 1073 aa14.49□□□□□ -0.09
TRN1tP(UGG)A LOT6Q07923 191 aa14.49□□□□□ -0.09
TRN1tP(UGG)A RSA1Q08932 381 aa14.49□□□□□ -0.09
TRN1tP(UGG)A PSF1Q12488 208 aa14.49□□□□□ -0.09
TRN1tP(UGG)A ATR1P13090 542 aa14.48□□□□□ -0.09
TRN1tP(UGG)A SAC7P17121 654 aa14.48□□□□□ -0.09
TRN1tP(UGG)A NAR1P23503 491 aaKnown RBP14.48□□□□□ -0.09
TRN1tP(UGG)A SNM1P40993 198 aa14.48□□□□□ -0.09
TRN1tP(UGG)A CUP9P41817 306 aa14.48□□□□□ -0.09
TRN1tP(UGG)A REX3Q12090 404 aa14.48□□□□□ -0.09
TRN1tP(UGG)A GLT1Q12680 2145 aaKnown RBP14.48□□□□□ -0.09
TRN1tP(UGG)A YPT1P01123 206 aaKnown RBP14.47□□□□□ -0.09
TRN1tP(UGG)A SEA4P38164 1038 aa14.47□□□□□ -0.09
TRN1tP(UGG)A ECM34P38728 170 aa14.47□□□□□ -0.09
TRN1tP(UGG)A ANS1P38832 159 aa14.47□□□□□ -0.09
TRN1tP(UGG)A FAR7P43592 221 aa14.47□□□□□ -0.09
TRN1tP(UGG)A VMA10P48836 114 aaKnown RBP14.47□□□□□ -0.09
TRN1tP(UGG)A YPL107WQ02873 248 aa14.47□□□□□ -0.09
TRN1tP(UGG)A RSM10Q03201 203 aa14.47□□□□□ -0.09
TRN1tP(UGG)A YMR226CQ05016 267 aaKnown RBP14.47□□□□□ -0.09
TRN1tP(UGG)A AKR2Q12013 749 aa14.47□□□□□ -0.09
TRN1tP(UGG)A TPO4Q12256 659 aa14.47□□□□□ -0.09
TRN1tP(UGG)A PRP46Q12417 451 aaPredicted RBP14.47□□□□□ -0.09
TRN1tP(UGG)A POL4P25615 582 aa14.46□□□□□ -0.09
TRN1tP(UGG)A IDH1P28834 360 aaKnown RBP RIP-Chip data14.46□□□□□ -0.09not detected
TRN1tP(UGG)A ORC2P32833 620 aa14.46□□□□□ -0.09
TRN1tP(UGG)A TOS2P50078 622 aa14.46□□□□□ -0.09
TRN1tP(UGG)A MDM30Q05930 598 aa14.46□□□□□ -0.09
TRN1tP(UGG)A VPS36Q06696 566 aa14.46□□□□□ -0.09
TRN1tP(UGG)A YPL066WQ12194 479 aa14.46□□□□□ -0.09
TRN1tP(UGG)A EXO84P38261 753 aa14.45□□□□□ -0.1
TRN1tP(UGG)A YAR028WP39548 234 aa14.45□□□□□ -0.1
TRN1tP(UGG)A MPA43P53583 542 aaPredicted RBP14.45□□□□□ -0.1
TRN1tP(UGG)A RNH202Q05635 350 aa14.45□□□□□ -0.1
TRN1tP(UGG)A BAR1P12630 587 aa14.44□□□□□ -0.1
TRN1tP(UGG)A LDB16P25587 256 aa14.44□□□□□ -0.1
TRN1tP(UGG)A RCY1P39531 840 aa14.44□□□□□ -0.1
TRN1tP(UGG)A GID8P40208 455 aa14.44□□□□□ -0.1
TRN1tP(UGG)A SMK1P41808 388 aa14.44□□□□□ -0.1
TRN1tP(UGG)A NUP57P48837 541 aa14.44□□□□□ -0.1
TRN1tP(UGG)A DBP6P53734 629 aaKnown RBP14.44□□□□□ -0.1
TRN1tP(UGG)A YPL068CQ02749 293 aa14.44□□□□□ -0.1
TRN1tP(UGG)A YDR541CQ03049 344 aa14.44□□□□□ -0.1
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms