RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 BNI5P53890 448 aaKnown RBP3.5□□□□□ -1.85
snR78snR78 RPL21AQ02753 160 aaKnown RBP3.5□□□□□ -1.85
snR78snR78 YLR345WQ06137 509 aa3.5□□□□□ -1.85
snR78snR78 MMR1Q06324 491 aa3.5□□□□□ -1.85
snR78snR78 YDL114WQ07530 308 aa3.5□□□□□ -1.85
snR78snR78 BUD21Q08492 214 aaPredicted RBP3.5□□□□□ -1.85
snR78snR78 RPL21BQ12672 160 aaKnown RBP3.5□□□□□ -1.85
snR78snR78 SSC1P0CS90 654 aaKnown RBP3.49□□□□□ -1.85
snR78snR78 SKN1P33336 771 aa3.49□□□□□ -1.85
snR78snR78 HEL1P36113 551 aa3.49□□□□□ -1.85
snR78snR78 YGR117CP53270 476 aa3.49□□□□□ -1.85
snR78snR78 PRP42Q03776 544 aaKnown RBP3.49□□□□□ -1.85
snR78snR78 INH1P01097 85 aa3.48□□□□□ -1.85
snR78snR78 STE7P06784 515 aa3.48□□□□□ -1.85
snR78snR78 ALG1P16661 449 aa3.48□□□□□ -1.85
snR78snR78 NFU1P32860 256 aa3.48□□□□□ -1.85
snR78snR78 ASC1P38011 319 aaKnown RBP3.48□□□□□ -1.85
snR78snR78 WSS1P38838 269 aa3.48□□□□□ -1.85
snR78snR78 VPS54Q12071 889 aa3.48□□□□□ -1.85
snR78snR78 RUP1Q12242 671 aa3.48□□□□□ -1.85
snR78snR78 YDL199CQ12407 687 aa3.48□□□□□ -1.85
snR78snR78 CDC31P06704 161 aaKnown RBP3.47□□□□□ -1.85
snR78snR78 ARO3P14843 370 aaKnown RBP3.47□□□□□ -1.85
snR78snR78 CMK2P22517 447 aa3.47□□□□□ -1.85
snR78snR78 SLM4P38247 162 aa3.47□□□□□ -1.85
snR78snR78 PAB1P04147 577 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
snR78snR78 CDC21P06785 304 aa3.46□□□□□ -1.86
snR78snR78 PUT4P15380 627 aa3.46□□□□□ -1.86
snR78snR78 RPN12P32496 274 aa3.46□□□□□ -1.86
snR78snR78 OLA1P38219 394 aaKnown RBP3.46□□□□□ -1.86
snR78snR78 LSM5P40089 93 aaKnown RBP3.46□□□□□ -1.86
snR78snR78 VHS2P40463 436 aa3.46□□□□□ -1.86
snR78snR78 CAK1P43568 368 aaPredicted RBP3.46□□□□□ -1.86
snR78snR78 TOM22P49334 152 aa3.46□□□□□ -1.86
snR78snR78 VHT1P53241 593 aa3.46□□□□□ -1.86
snR78snR78 RRG1Q12167 365 aaPredicted RBP3.46□□□□□ -1.86
snR78snR78 SCM3Q12334 223 aa3.46□□□□□ -1.86
snR78snR78 FUN26P31381 517 aa3.45□□□□□ -1.86
snR78snR78 BYE1P36106 594 aa3.45□□□□□ -1.86
snR78snR78 PEX22P39718 180 aa3.45□□□□□ -1.86
snR78snR78 TRM112P53738 135 aaPredicted RBP3.45□□□□□ -1.86
snR78snR78 FUR1P18562 216 aaKnown RBP3.44□□□□□ -1.86
snR78snR78 GIT1P25346 518 aa3.44□□□□□ -1.86
snR78snR78 SOL2P37262 315 aa3.44□□□□□ -1.86
snR78snR78 CHL4P38907 458 aa3.44□□□□□ -1.86
snR78snR78 TPI1P00942 248 aaKnown RBP3.43□□□□□ -1.86
snR78snR78 ERV1P27882 189 aa3.43□□□□□ -1.86
snR78snR78 URA7P28274 579 aaKnown RBP3.43□□□□□ -1.86
snR78snR78 TPS2P31688 896 aaKnown RBP3.43□□□□□ -1.86
snR78snR78 SKT5P34226 696 aa3.43□□□□□ -1.86
snR78snR78 INM1P38710 295 aa3.43□□□□□ -1.86
snR78snR78 WSC4P38739 605 aa3.43□□□□□ -1.86
snR78snR78 GPI16P38875 610 aa3.43□□□□□ -1.86
snR78snR78 STN1P38960 494 aa3.43□□□□□ -1.86
snR78snR78 PIB2P53191 635 aa3.43□□□□□ -1.86
snR78snR78 ENT5Q03769 411 aaKnown RBP3.43□□□□□ -1.86
snR78snR78 PCL9Q12477 304 aa3.43□□□□□ -1.86
snR78snR78 RPS19AP07280 144 aaKnown RBP3.42□□□□□ -1.86
snR78snR78 RPS19BP07281 144 aaPredicted RBP3.42□□□□□ -1.86
snR78snR78 MAS2P11914 482 aa3.42□□□□□ -1.86
snR78snR78 HSP104P31539 908 aaKnown RBP3.42□□□□□ -1.86
snR78snR78 GPX2P38143 162 aa3.42□□□□□ -1.86
snR78snR78 SLF1Q12034 447 aaKnown RBP3.42□□□□□ -1.86
snR78snR78 AEP3Q12089 606 aa3.42□□□□□ -1.86
snR78snR78 ASP3-2P0CX77 362 aa3.41□□□□□ -1.86
snR78snR78 ASP3-3P0CX78 362 aa3.41□□□□□ -1.86
snR78snR78 ASP3-4P0CX79 362 aa3.41□□□□□ -1.86
snR78snR78 ASP3-1P0CZ17 362 aa3.41□□□□□ -1.86
snR78snR78 ADK2P26364 225 aa3.41□□□□□ -1.86
snR78snR78 RIM1P32445 135 aaKnown RBP3.41□□□□□ -1.86
snR78snR78 MCR1P36060 302 aaKnown RBP3.41□□□□□ -1.86
snR78snR78 ZTA1P38230 334 aaKnown RBP3.41□□□□□ -1.86
snR78snR78 LSM12P38828 187 aaKnown RBP3.41□□□□□ -1.86
snR78snR78 SER3P40054 469 aa3.41□□□□□ -1.86
snR78snR78 MDM1Q01846 1127 aa3.41□□□□□ -1.86
snR78snR78 YHC1Q05900 231 aaKnown RBP3.41□□□□□ -1.86
snR78snR78 TIR4Q12218 487 aaPredicted RBP3.41□□□□□ -1.86
snR78snR78 YOP1Q12402 180 aa3.41□□□□□ -1.86
snR78snR78 REX2P54964 269 aaKnown RBP3.4□□□□□ -1.87
snR78snR78 YPR195CQ06594 109 aa3.4□□□□□ -1.87
snR78snR78 IME2P32581 645 aa3.39□□□□□ -1.87
snR78snR78 GEP4P38812 185 aa3.39□□□□□ -1.87
snR78snR78 ATM1P40416 690 aa3.39□□□□□ -1.87
snR78snR78 STE24P47154 453 aa3.39□□□□□ -1.87
snR78snR78 YGR067CP53243 804 aa3.39□□□□□ -1.87
snR78snR78 YDR061WQ12298 539 aa3.39□□□□□ -1.87
snR78snR78 HMS1Q12398 434 aa3.39□□□□□ -1.87
snR78snR78 TPK3P05986 398 aa3.38□□□□□ -1.87
snR78snR78 SPO23P33757 523 aa3.38□□□□□ -1.87
snR78snR78 TIR2P33890 251 aa3.38□□□□□ -1.87
snR78snR78 TRF5P48561 642 aaKnown RBP3.38□□□□□ -1.87
snR78snR78 YDR131CQ03899 556 aa3.38□□□□□ -1.87
snR78snR78 YDR115WQ04598 105 aa3.38□□□□□ -1.87
snR78snR78 ERB1Q04660 807 aaKnown RBP3.38□□□□□ -1.87
snR78snR78 MSC3Q05812 728 aa3.38□□□□□ -1.87
snR78snR78 MCT1Q12283 360 aa3.38□□□□□ -1.87
snR78snR78 SLM5P25345 492 aaKnown RBP3.37□□□□□ -1.87
snR78snR78 PDC2P32896 925 aa3.37□□□□□ -1.87
snR78snR78 PRY2P36110 329 aa3.37□□□□□ -1.87
snR78snR78 VEL1P53058 206 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms