RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 PRP38Q00723 242 aaPredicted RBP0.1□□□□□ -2.39
snR48snR48 MRX11Q03079 207 aa0.1□□□□□ -2.39
snR48snR48 VTI1Q04338 217 aa0.1□□□□□ -2.39
snR48snR48 MSC3Q05812 728 aa0.1□□□□□ -2.39
snR48snR48 YDL114WQ07530 308 aa0.1□□□□□ -2.39
snR48snR48 MET8P15807 274 aa0.09□□□□□ -2.4
snR48snR48 BEM1P29366 551 aa0.09□□□□□ -2.4
snR48snR48 MUD2P36084 527 aaKnown RBP0.09□□□□□ -2.4
snR48snR48 RMD8P43620 662 aa0.09□□□□□ -2.4
snR48snR48 TOS3P43637 560 aa0.09□□□□□ -2.4
snR48snR48 RMI1Q02685 241 aa0.09□□□□□ -2.4
snR48snR48 TAF12Q03761 539 aa0.09□□□□□ -2.4
snR48snR48 MDM30Q05930 598 aa0.09□□□□□ -2.4
snR48snR48 SIL1Q08199 421 aa0.09□□□□□ -2.4
snR48snR48 HMS1Q12398 434 aa0.09□□□□□ -2.4
snR48snR48 FUN26P31381 517 aa0.08□□□□□ -2.4
snR48snR48 LSM12P38828 187 aaKnown RBP0.08□□□□□ -2.4
snR48snR48 ECM14P38836 430 aa0.08□□□□□ -2.4
snR48snR48 BDH1P39714 382 aa0.08□□□□□ -2.4
snR48snR48 HEM14P40012 539 aa0.08□□□□□ -2.4
snR48snR48 MET28P40573 187 aa0.08□□□□□ -2.4
snR48snR48 PHO86P46956 311 aa0.08□□□□□ -2.4
snR48snR48 SHE4P51534 789 aa0.08□□□□□ -2.4
snR48snR48 COS1P53822 381 aa0.08□□□□□ -2.4
snR48snR48 REX2P54964 269 aaKnown RBP0.08□□□□□ -2.4
snR48snR48 YPL080CQ02826 108 aa0.08□□□□□ -2.4
snR48snR48 YPL113CQ02961 396 aa0.08□□□□□ -2.4
snR48snR48 YML131WQ03102 365 aa0.08□□□□□ -2.4
snR48snR48 RLP24Q07915 199 aaKnown RBP0.08□□□□□ -2.4
snR48snR48 YOL029CQ08187 201 aa0.08□□□□□ -2.4
snR48snR48 VPS54Q12071 889 aa0.08□□□□□ -2.4
snR48snR48 ATG29Q12092 213 aa0.08□□□□□ -2.4
snR48snR48 MCT1Q12283 360 aa0.08□□□□□ -2.4
snR48snR48 STE2D6VTK4 431 aa0.07□□□□□ -2.4
snR48snR48 RPL3P14126 387 aaKnown RBP0.07□□□□□ -2.4
snR48snR48 CPT1P17898 393 aa0.07□□□□□ -2.4
snR48snR48 RAD23P32628 398 aaKnown RBP0.07□□□□□ -2.4
snR48snR48 SEC66P33754 206 aa0.07□□□□□ -2.4
snR48snR48 YMR262WP38430 313 aa0.07□□□□□ -2.4
snR48snR48 YEL057CP39983 233 aa0.07□□□□□ -2.4
snR48snR48 UFE1P41834 346 aa0.07□□□□□ -2.4
snR48snR48 ATG34Q12292 412 aa0.07□□□□□ -2.4
snR48snR48 MET2P08465 486 aa0.06□□□□□ -2.4
snR48snR48 IMA3P0CW40 589 aa0.06□□□□□ -2.4
snR48snR48 IMA4P0CW41 589 aa0.06□□□□□ -2.4
snR48snR48 RPS18AP0CX55 146 aaKnown RBP0.06□□□□□ -2.4
snR48snR48 RPS18BP0CX56 146 aaPredicted RBP0.06□□□□□ -2.4
snR48snR48 MMS4P38257 691 aa0.06□□□□□ -2.4
snR48snR48 CTK3P46963 296 aaPredicted RBP0.06□□□□□ -2.4
snR48snR48 VAC7P53950 1165 aa0.06□□□□□ -2.4
snR48snR48 STD1Q02794 444 aa0.06□□□□□ -2.4
snR48snR48 YMR010WQ03687 405 aa0.06□□□□□ -2.4
snR48snR48 IMA2Q08295 589 aa0.06□□□□□ -2.4
snR48snR48 HSP42Q12329 375 aa0.06□□□□□ -2.4
snR48snR48 PCL9Q12477 304 aa0.06□□□□□ -2.4
snR48snR48 POM152P39685 1337 aa0.06□□□□□ -2.4
snR48snR48 SSC1P0CS90 654 aaKnown RBP0.05□□□□□ -2.4
snR48snR48 CUP2P15315 225 aa0.05□□□□□ -2.4
snR48snR48 KRE1P17260 313 aa0.05□□□□□ -2.4
snR48snR48 HPR1P17629 752 aaKnown RBP0.05□□□□□ -2.4
snR48snR48 COX10P21592 462 aa0.05□□□□□ -2.4
snR48snR48 RRN10P38204 145 aa0.05□□□□□ -2.4
snR48snR48 YFR054CP43622 192 aa0.05□□□□□ -2.4
snR48snR48 ASG7P46993 209 aa0.05□□□□□ -2.4
snR48snR48 TRM112P53738 135 aaPredicted RBP0.05□□□□□ -2.4
snR48snR48 SPR6Q01684 191 aa0.05□□□□□ -2.4
snR48snR48 MYO5Q04439 1219 aaKnown RBP0.05□□□□□ -2.4
snR48snR48 ENT1Q12518 454 aa0.05□□□□□ -2.4
snR48snR48 ATP1P07251 545 aaKnown RBP0.04□□□□□ -2.4
snR48snR48 SRV2P17555 526 aaKnown RBP0.04□□□□□ -2.4
snR48snR48 KRE2P27809 442 aa0.04□□□□□ -2.4
snR48snR48 HXT3P32466 567 aaKnown RBP0.04□□□□□ -2.4
snR48snR48 SPO23P33757 523 aa0.04□□□□□ -2.4
snR48snR48 COS9P36034 407 aa0.04□□□□□ -2.4
snR48snR48 NOP4P37838 685 aaKnown RBP0.04□□□□□ -2.4
snR48snR48 SHE3P38272 425 aaKnown RBP0.04□□□□□ -2.4
snR48snR48 GEP4P38812 185 aa0.04□□□□□ -2.4
snR48snR48 ASP1P38986 381 aaPredicted RBP0.04□□□□□ -2.4
snR48snR48 KEG1P43614 200 aa0.04□□□□□ -2.4
snR48snR48 FMS1P50264 508 aa0.04□□□□□ -2.4
snR48snR48 MNP1P53163 194 aaPredicted RBP0.04□□□□□ -2.4
snR48snR48 VPS75P53853 264 aa0.04□□□□□ -2.4
snR48snR48 MMT1Q03218 510 aa0.04□□□□□ -2.4
snR48snR48 YDR131CQ03899 556 aa0.04□□□□□ -2.4
snR48snR48 API2Q04413 109 aa0.04□□□□□ -2.4
snR48snR48 YDR114CQ04597 100 aa0.04□□□□□ -2.4
snR48snR48 FSH2Q05015 223 aa0.04□□□□□ -2.4
snR48snR48 VAM3Q12241 283 aa0.04□□□□□ -2.4
snR48snR48 SCEIP03882 235 aa0.03□□□□□ -2.4
snR48snR48 UNG1P12887 359 aa0.03□□□□□ -2.4
snR48snR48 GPI10P30777 616 aa0.03□□□□□ -2.4
snR48snR48 LDS1P31379 325 aa0.03□□□□□ -2.4
snR48snR48 ANP1P32629 500 aa0.03□□□□□ -2.4
snR48snR48 GPI16P38875 610 aa0.03□□□□□ -2.4
snR48snR48 IES5P40060 125 aa0.03□□□□□ -2.4
snR48snR48 YER188WP40103 239 aa0.03□□□□□ -2.4
snR48snR48 BUD13P46947 266 aaPredicted RBP0.03□□□□□ -2.4
snR48snR48 HSH155P49955 971 aaKnown RBP0.03□□□□□ -2.4
snR48snR48 CDH1P53197 566 aa0.03□□□□□ -2.4
snR48snR48 SMD1Q02260 146 aaPredicted RBP0.03□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms