RNA–Protein interactions for RNA: YPL092W

SSU1, Transcript of Plasma membrane sulfite pump involved in sulfite metabolism, yeast

Gene SSU1, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSU1	YPL092W	PRM1	P53835	661 aa		3.78	□□□□□ -1.8
SSU1	YPL092W	YMR209C	Q03648	457 aa		3.78	□□□□□ -1.8
SSU1	YPL092W	RPN9	Q04062	393 aa	Known RBP	3.78	□□□□□ -1.8
SSU1	YPL092W	FAR8	Q05040	523 aa		3.78	□□□□□ -1.8
SSU1	YPL092W	YPR114W	Q06107	315 aa		3.78	□□□□□ -1.8
SSU1	YPL092W	MNE1	P24720	663 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	CLB2	P24869	491 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	YCR099C	P25657	155 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	PDB1	P32473	366 aa	Known RBP	3.77	□□□□□ -1.81
SSU1	YPL092W	AUR1	P36107	401 aa	Predicted RBP	3.77	□□□□□ -1.81
SSU1	YPL092W	YBR062C	P38239	180 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	ARP1	P38696	384 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	YDR089W	P38966	869 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	TIM17	P39515	158 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	OSW5	P40219	148 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	SER33	P40510	469 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	NNF2	P53253	936 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	FRE4	P53746	719 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	YNL143C	P53908	130 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	RPC11	Q04307	110 aa	Predicted RBP	3.77	□□□□□ -1.81
SSU1	YPL092W	NSE1	Q07913	336 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	YOL159C	Q08300	171 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	APC9	Q12107	265 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	YBR298C-A	Q8TGK4	73 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	RGS2	Q99188	309 aa		3.77	□□□□□ -1.81
SSU1	YPL092W	SEC53	P07283	254 aa	Known RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	PWP1	P21304	576 aa	Known RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	VMA16	P23968	213 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	POL4	P25615	582 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	BRF1	P29056	596 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	PXA2	P34230	853 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	GDT1	P38301	280 aa	Predicted RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	PHO89	P38361	574 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	LIN1	P38852	340 aa	Predicted RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	NDE1	P40215	560 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	PKP1	P40530	394 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	TRS85	P46944	698 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	LIA1	P47120	325 aa	Known RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	SRB7	P47822	140 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	COG7	P53195	279 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	AQR1	P53943	586 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	EFM6	P53970	246 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	PET117	Q02771	107 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	YMR178W	Q03219	274 aa	Known RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	YDR131C	Q03899	556 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	CSN9	Q03981	162 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	INP53	Q12271	1107 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	RAD3	P06839	778 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
SSU1	YPL092W	MET8	P15807	274 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	RIM1	P32445	135 aa	Known RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	PTM1	P32857	523 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	PMT1	P33775	817 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	LDB7	P38210	180 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	SRP72	P38688	640 aa	Known RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	YHR182W	P38870	785 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	ALG8	P40351	577 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	AZF1	P41696	914 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	LCL3	P53153	274 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	TDA7	P53882	636 aa	Predicted RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	YMR155W	Q03795	547 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	TAF11	Q04226	346 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	YLR177W	Q06251	628 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	YDL218W	Q07629	317 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	CLP1	Q08685	445 aa	Predicted RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	YPL247C	Q12523	523 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	MEX67	Q99257	599 aa	Known RBP	3.76	□□□□□ -1.81
SSU1	YPL092W	YOR338W	Q99326	363 aa		3.76	□□□□□ -1.81
SSU1	YPL092W	BEM2	P39960	2167 aa	Known RBP	3.75	□□□□□ -1.81
SSU1	YPL092W	UBA1	P22515	1024 aa	Known RBP	3.75	□□□□□ -1.81
SSU1	YPL092W	PHA2	P32452	334 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	SPS19	P32573	292 aa	Known RBP	3.75	□□□□□ -1.81
SSU1	YPL092W	RML2	P32611	393 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	LRP1	P38801	184 aa	Known RBP	3.75	□□□□□ -1.81
SSU1	YPL092W	UIP3	P39547	235 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	RPH1	P39956	796 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	HAT2	P39984	401 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	FET5	P43561	622 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	FAR3	P46671	204 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	DIA3	P52290	468 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	NBP35	P52920	328 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	BOL2	P53082	120 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	TAF12	Q03761	539 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	TRM12	Q04235	462 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	ATG10	Q07879	167 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	SMF3	Q12078	473 aa	Predicted RBP	3.75	□□□□□ -1.81
SSU1	YPL092W	NMD4	Q12129	218 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	SPE4	Q12455	300 aa		3.75	□□□□□ -1.81
SSU1	YPL092W	CDC31	P06704	161 aa	Known RBP	3.74	□□□□□ -1.81
SSU1	YPL092W	ARD1	P07347	238 aa	Predicted RBP	3.74	□□□□□ -1.81
SSU1	YPL092W	OLE1	P21147	510 aa	Known RBP	3.74	□□□□□ -1.81
SSU1	YPL092W	CPR3	P25719	182 aa		3.74	□□□□□ -1.81
SSU1	YPL092W	PRP18	P33411	251 aa	Predicted RBP	3.74	□□□□□ -1.81
SSU1	YPL092W	LOS1	P33418	1100 aa	Predicted RBP	3.74	□□□□□ -1.81
SSU1	YPL092W	SNU114	P36048	1008 aa	Known RBP	3.74	□□□□□ -1.81
SSU1	YPL092W	STB6	P36085	766 aa		3.74	□□□□□ -1.81
SSU1	YPL092W	MAK5	P38112	773 aa	Predicted RBP	3.74	□□□□□ -1.81
SSU1	YPL092W	YSW1	P38280	609 aa		3.74	□□□□□ -1.81
SSU1	YPL092W	TAE1	P38340	232 aa		3.74	□□□□□ -1.81
SSU1	YPL092W	KRE9	P39005	276 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms