RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W FDH1Q08911 376 aa2.26□□□□□ -2.05
SWM2YNR004W TPK3P05986 398 aa2.25□□□□□ -2.05
SWM2YNR004W NFT1P0CE68 1218 aa2.25□□□□□ -2.05
SWM2YNR004W NAM2P11325 894 aa2.25□□□□□ -2.05
SWM2YNR004W EXG1P23776 448 aaKnown RBP2.25□□□□□ -2.05
SWM2YNR004W PHO84P25297 587 aaKnown RBP2.25□□□□□ -2.05
SWM2YNR004W RDS1P25611 832 aa2.25□□□□□ -2.05
SWM2YNR004W FAA1P30624 700 aaKnown RBP2.25□□□□□ -2.05
SWM2YNR004W DEP1P31385 405 aa2.25□□□□□ -2.05
SWM2YNR004W QDR3P38227 689 aa2.25□□□□□ -2.05
SWM2YNR004W RXT2P38255 430 aa2.25□□□□□ -2.05
SWM2YNR004W MLH1P38920 769 aa2.25□□□□□ -2.05
SWM2YNR004W DFG10P40526 253 aa2.25□□□□□ -2.05
SWM2YNR004W LCB2P40970 561 aa2.25□□□□□ -2.05
SWM2YNR004W MRM2P53123 320 aa2.25□□□□□ -2.05
SWM2YNR004W MST27P53176 234 aa2.25□□□□□ -2.05
SWM2YNR004W RRP46P53256 223 aaPredicted RBP2.25□□□□□ -2.05
SWM2YNR004W NUP116Q02630 1113 aa2.25□□□□□ -2.05
SWM2YNR004W RTN1Q04947 295 aaKnown RBP2.25□□□□□ -2.05
SWM2YNR004W YRM1Q12340 786 aa2.25□□□□□ -2.05
SWM2YNR004W CAP2P13517 287 aa2.24□□□□□ -2.05
SWM2YNR004W THR4P16120 514 aaKnown RBP2.24□□□□□ -2.05
SWM2YNR004W YKR015CP36111 568 aa2.24□□□□□ -2.05
SWM2YNR004W PFF1P38244 976 aa2.24□□□□□ -2.05
SWM2YNR004W YNL208WP40159 199 aaKnown RBP2.24□□□□□ -2.05
SWM2YNR004W PRE5P40302 234 aaKnown RBP2.24□□□□□ -2.05
SWM2YNR004W PHB2P50085 310 aa2.24□□□□□ -2.05
SWM2YNR004W SNT309Q06091 175 aaPredicted RBP2.24□□□□□ -2.05
SWM2YNR004W TMS1Q12116 473 aa2.24□□□□□ -2.05
SWM2YNR004W PCL9Q12477 304 aa2.24□□□□□ -2.05
SWM2YNR004W TRP1P00912 224 aa2.23□□□□□ -2.05
SWM2YNR004W IMA3P0CW40 589 aa2.23□□□□□ -2.05
SWM2YNR004W IMA4P0CW41 589 aa2.23□□□□□ -2.05
SWM2YNR004W RNA1P11745 407 aaKnown RBP2.23□□□□□ -2.05
SWM2YNR004W ISY1P21374 235 aaPredicted RBP2.23□□□□□ -2.05
SWM2YNR004W MSP1P28737 362 aa2.23□□□□□ -2.05
SWM2YNR004W HMX1P32339 317 aa2.23□□□□□ -2.05
SWM2YNR004W VPH1P32563 840 aaKnown RBP2.23□□□□□ -2.05
SWM2YNR004W YSC83P32792 385 aa2.23□□□□□ -2.05
SWM2YNR004W APE4P38821 490 aa2.23□□□□□ -2.05
SWM2YNR004W ROG1P53118 685 aa2.23□□□□□ -2.05
SWM2YNR004W RET3P53600 189 aa2.23□□□□□ -2.05
SWM2YNR004W MGR3Q04472 501 aa2.23□□□□□ -2.05
SWM2YNR004W RIF2Q06208 395 aa2.23□□□□□ -2.05
SWM2YNR004W NOP6Q07623 225 aaKnown RBP2.23□□□□□ -2.05
SWM2YNR004W YOL075CQ08234 1294 aa2.23□□□□□ -2.05
SWM2YNR004W IMA2Q08295 589 aa2.23□□□□□ -2.05
SWM2YNR004W CUE5Q08412 411 aaKnown RBP2.23□□□□□ -2.05
SWM2YNR004W RNH203Q12338 110 aa2.23□□□□□ -2.05
SWM2YNR004W LDB17Q12342 491 aa2.23□□□□□ -2.05
SWM2YNR004W VMA2P16140 517 aaKnown RBP2.22□□□□□ -2.05
SWM2YNR004W UBA1P22515 1024 aaKnown RBP2.22□□□□□ -2.05
SWM2YNR004W AAT2P23542 418 aaKnown RBP2.22□□□□□ -2.05
SWM2YNR004W LDS1P31379 325 aa2.22□□□□□ -2.05
SWM2YNR004W SPR1P32603 445 aa2.22□□□□□ -2.05
SWM2YNR004W PRS1P32895 427 aaKnown RBP2.22□□□□□ -2.05
SWM2YNR004W TIR2P33890 251 aa2.22□□□□□ -2.05
SWM2YNR004W UIP5P36137 443 aa2.22□□□□□ -2.05
SWM2YNR004W YBR137WP38276 179 aa2.22□□□□□ -2.05
SWM2YNR004W SPP381P38282 291 aaPredicted RBP2.22□□□□□ -2.05
SWM2YNR004W MSG5P38590 489 aa2.22□□□□□ -2.05
SWM2YNR004W GEP4P38812 185 aa2.22□□□□□ -2.05
SWM2YNR004W SBE22P38814 852 aa2.22□□□□□ -2.05
SWM2YNR004W GPI16P38875 610 aa2.22□□□□□ -2.05
SWM2YNR004W YMR134WP40207 237 aa2.22□□□□□ -2.05
SWM2YNR004W LYS12P40495 371 aaKnown RBP2.22□□□□□ -2.05
SWM2YNR004W EFM4P40516 257 aa2.22□□□□□ -2.05
SWM2YNR004W CHS6P40955 746 aa2.22□□□□□ -2.05
SWM2YNR004W GAB1P41733 394 aa2.22□□□□□ -2.05
SWM2YNR004W ECM7Q06200 448 aa2.22□□□□□ -2.05
SWM2YNR004W HRT3Q12347 344 aa2.22□□□□□ -2.05
SWM2YNR004W IZH2Q12442 317 aa2.22□□□□□ -2.05
SWM2YNR004W SPT7P35177 1332 aa2.21□□□□□ -2.06
SWM2YNR004W CYC3P06182 269 aa2.21□□□□□ -2.06
SWM2YNR004W FUN26P31381 517 aa2.21□□□□□ -2.06
SWM2YNR004W MSK1P32048 576 aa2.21□□□□□ -2.06
SWM2YNR004W NUP2P32499 720 aa2.21□□□□□ -2.06
SWM2YNR004W YHR182WP38870 785 aa2.21□□□□□ -2.06
SWM2YNR004W MNL1P38888 796 aa2.21□□□□□ -2.06
SWM2YNR004W CAJ1P39101 391 aa2.21□□□□□ -2.06
SWM2YNR004W AIM10P39965 576 aaKnown RBP2.21□□□□□ -2.06
SWM2YNR004W SEC9P40357 651 aa2.21□□□□□ -2.06
SWM2YNR004W UTP18P40362 594 aaPredicted RBP2.21□□□□□ -2.06
SWM2YNR004W SIM1P40472 476 aa2.21□□□□□ -2.06
SWM2YNR004W SEC27P41811 889 aaKnown RBP2.21□□□□□ -2.06
SWM2YNR004W YNR068CP53754 272 aa2.21□□□□□ -2.06
SWM2YNR004W KTR5P53966 522 aaPredicted RBP2.21□□□□□ -2.06
SWM2YNR004W YPR091CQ06833 770 aa2.21□□□□□ -2.06
SWM2YNR004W SHS1Q07657 551 aa2.21□□□□□ -2.06
SWM2YNR004W PEX27Q08580 376 aa2.21□□□□□ -2.06
SWM2YNR004W FCY22Q12119 530 aa2.21□□□□□ -2.06
SWM2YNR004W APC2Q12440 853 aa2.21□□□□□ -2.06
SWM2YNR004W RPS18AP0CX55 146 aaKnown RBP2.2□□□□□ -2.06
SWM2YNR004W RPS18BP0CX56 146 aaPredicted RBP2.2□□□□□ -2.06
SWM2YNR004W TAL1P15019 335 aaKnown RBP2.2□□□□□ -2.06
SWM2YNR004W GIT1P25346 518 aa2.2□□□□□ -2.06
SWM2YNR004W HXT1P32465 570 aa2.2□□□□□ -2.06
SWM2YNR004W YEL043WP32618 956 aa2.2□□□□□ -2.06
SWM2YNR004W TOA2P32774 122 aa2.2□□□□□ -2.06
SWM2YNR004W VAM7P32912 316 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms