RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	RPL31B	P0C2H9	113 aa	Known RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	GPA2	P10823	449 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	APE1	P14904	514 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	COQ1	P18900	473 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	EXO70	P19658	623 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	PRR1	P28708	518 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	TFB1	P32776	642 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	SIP2	P34164	415 aa	Known RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	CLG1	P35190	452 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	YBR139W	P38109	508 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	MSG5	P38590	489 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	SPL2	P38839	148 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	END3	P39013	349 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	MDE1	P47095	244 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	TRF5	P48561	642 aa	Known RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	RMR1	P53060	241 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	RTC4	P53850	401 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	BNA5	Q05979	453 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	ASA1	Q06822	443 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	SYO1	Q07395	620 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	NOT5	Q12514	560 aa	Predicted RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	LSO2	Q3E772	92 aa	Known RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	AMD1	P15274	810 aa	Known RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	SEC62	P21825	274 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	CLB3	P24870	427 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	SNT1	P25357	1226 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	PPZ1	P26570	692 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	RAD14	P28519	371 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	UTR4	P32626	227 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	KAP104	P38217	918 aa	Known RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	RRP3	P38712	501 aa	Known RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	SER33	P40510	469 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	PAC11	P40960	533 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	HXT14	P42833	540 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	TOS3	P43637	560 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
VPS33	YLR396C	EMC2	P47133	292 aa	Known RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	CWC25	P53854	179 aa	Known RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	SKI8	Q02793	397 aa	Predicted RBP	3.18	□□□□□ -1.9
VPS33	YLR396C	SLD5	Q03406	294 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	TAF12	Q03761	539 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	NDD1	Q08887	554 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	CEX1	Q12453	761 aa		3.18	□□□□□ -1.9
VPS33	YLR396C	RPL6B	P05739	176 aa	Known RBP	3.17	□□□□□ -1.9
VPS33	YLR396C	MRS3	P10566	314 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	STF2	P16965	84 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	YCR007C	P25354	239 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	SMI1	P32566	505 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	BLI1	P35727	113 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	ETR1	P38071	380 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	YBR285W	P38354	144 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	HIS2	P38635	335 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	KEL1	P38853	1164 aa	Known RBP	3.17	□□□□□ -1.9
VPS33	YLR396C	LIA1	P47120	325 aa	Known RBP	3.17	□□□□□ -1.9
VPS33	YLR396C	YGL138C	P53122	345 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	REX2	P54964	269 aa	Known RBP	3.17	□□□□□ -1.9
VPS33	YLR396C	RPL22B	P56628	122 aa	Known RBP	3.17	□□□□□ -1.9
VPS33	YLR396C	URC2	Q04411	772 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	YOL159C-A	Q3E769	90 aa		3.17	□□□□□ -1.9
VPS33	YLR396C	MEI4	P29467	408 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	TPS2	P31688	896 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	UTP30	P36144	274 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	RRT2	P38332	387 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	GOS1	P38736	223 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	LSM12	P38828	187 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	VPS52	P39904	641 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	YJL070C	P40361	888 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	YJL068C	P40363	299 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	PHB1	P40961	287 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	YMR027W	Q04371	470 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	ARR2	Q06597	130 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	NRT1	Q08485	598 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	YLR053C	Q12026	108 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	SPE3	Q12074	293 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	YDL109C	Q12103	647 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	ADF1	Q2V2Q1	113 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	ISY1	P21374	235 aa	Predicted RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	VPS3	P23643	1011 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	CRM1	P30822	1084 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	ZIP1	P31111	875 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	VMA8	P32610	256 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	ANP1	P32629	500 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	YNK1	P36010	153 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	SEO1	P39709	593 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	VMA13	P41807	478 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	SSN8	P47821	323 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	DIE2	P50076	525 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	MPS2	P53159	387 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	YGR250C	P53316	781 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	ZRG17	P53735	605 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	YET2	Q04210	160 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	IVY1	Q04934	453 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	RBS1	Q05672	457 aa	Known RBP	3.16	□□□□□ -1.9
VPS33	YLR396C	PHO92	Q06390	306 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	SGT1	Q08446	395 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	DAP1	Q12091	152 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	YOR342C	Q12182	319 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	YLR278C	Q05854	1341 aa		3.16	□□□□□ -1.9
VPS33	YLR396C	MAK31	P23059	88 aa		3.15	□□□□□ -1.9
VPS33	YLR396C	TFC1	P32367	649 aa		3.15	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms