RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C RAX1Q08760 435 aa4.82□□□□□ -1.64
YIR043CYIR043C SSC1P0CS90 654 aaKnown RBP4.81□□□□□ -1.64
YIR043CYIR043C CLN3P13365 580 aa4.81□□□□□ -1.64
YIR043CYIR043C HEM15P16622 393 aa4.81□□□□□ -1.64
YIR043CYIR043C YEF1P32622 495 aa4.81□□□□□ -1.64
YIR043CYIR043C TMT1P32643 299 aa4.81□□□□□ -1.64
YIR043CYIR043C TIF5P38431 405 aaKnown RBP4.81□□□□□ -1.64
YIR043CYIR043C JLP2P40206 208 aa4.81□□□□□ -1.64
YIR043CYIR043C WWM1P43582 211 aaKnown RBP4.81□□□□□ -1.64
YIR043CYIR043C YDL186WP48568 277 aa4.81□□□□□ -1.64
YIR043CYIR043C RRN9P53437 365 aa4.81□□□□□ -1.64
YIR043CYIR043C VTI1Q04338 217 aa4.81□□□□□ -1.64
YIR043CYIR043C VPS63O13549 108 aa4.8□□□□□ -1.64
YIR043CYIR043C RPC40P07703 335 aaKnown RBP4.8□□□□□ -1.64
YIR043CYIR043C TOA2P32774 122 aa4.8□□□□□ -1.64
YIR043CYIR043C SSO2P39926 295 aa4.8□□□□□ -1.64
YIR043CYIR043C MSO1P53604 210 aaKnown RBP4.8□□□□□ -1.64
YIR043CYIR043C YLR108CQ12259 485 aa4.8□□□□□ -1.64
YIR043CYIR043C ICT1Q12385 394 aa4.8□□□□□ -1.64
YIR043CYIR043C AIM45Q12480 344 aaKnown RBP4.8□□□□□ -1.64
YIR043CYIR043C SPO24Q3E752 67 aa4.8□□□□□ -1.64
YIR043CYIR043C YOR338WQ99326 363 aa4.8□□□□□ -1.64
YIR043CYIR043C CBP2P03874 630 aaPredicted RBP4.79□□□□□ -1.64
YIR043CYIR043C PAB1P04147 577 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64 RIP-Chip
YIR043CYIR043C CDC37P06101 506 aaKnown RBP4.79□□□□□ -1.64
YIR043CYIR043C RNR2P09938 399 aaKnown RBP4.79□□□□□ -1.64
YIR043CYIR043C GAL3P13045 520 aa4.79□□□□□ -1.64
YIR043CYIR043C EFB1P32471 206 aaKnown RBP4.79□□□□□ -1.64
YIR043CYIR043C MCR1P36060 302 aaKnown RBP4.79□□□□□ -1.64
YIR043CYIR043C YBR139WP38109 508 aa4.79□□□□□ -1.64
YIR043CYIR043C GEP4P38812 185 aa4.79□□□□□ -1.64
YIR043CYIR043C YFR018CP43599 363 aa4.79□□□□□ -1.64
YIR043CYIR043C YHC3P47040 408 aa4.79□□□□□ -1.64
YIR043CYIR043C SMP3Q04174 516 aa4.79□□□□□ -1.64
YIR043CYIR043C NDE2Q07500 545 aa4.79□□□□□ -1.64
YIR043CYIR043C HNT3Q08702 217 aa4.79□□□□□ -1.64
YIR043CYIR043C PPT2Q12036 173 aa4.79□□□□□ -1.64
YIR043CYIR043C AHC1Q12433 566 aa4.79□□□□□ -1.64
YIR043CYIR043C YLL053CP0CD98 152 aa4.78□□□□□ -1.64
YIR043CYIR043C MAS2P11914 482 aa4.78□□□□□ -1.64
YIR043CYIR043C MRPL8P22353 238 aa4.78□□□□□ -1.64
YIR043CYIR043C GRR1P24814 1151 aa4.78□□□□□ -1.64
YIR043CYIR043C DAL80P26343 269 aa4.78□□□□□ -1.64
YIR043CYIR043C GPX2P38143 162 aa4.78□□□□□ -1.64
YIR043CYIR043C END3P39013 349 aa4.78□□□□□ -1.64
YIR043CYIR043C COX14P39103 70 aa4.78□□□□□ -1.64
YIR043CYIR043C PRP39P39682 629 aaKnown RBP4.78□□□□□ -1.64
YIR043CYIR043C LCP5P40079 357 aaPredicted RBP4.78□□□□□ -1.64
YIR043CYIR043C IDP2P41939 412 aa4.78□□□□□ -1.64
YIR043CYIR043C TRM112P53738 135 aaPredicted RBP4.78□□□□□ -1.64
YIR043CYIR043C ARP5P53946 755 aa4.78□□□□□ -1.64
YIR043CYIR043C YRM1Q12340 786 aa4.78□□□□□ -1.64
YIR043CYIR043C PFK27Q12471 397 aaPredicted RBP4.78□□□□□ -1.64
YIR043CYIR043C RPS16AP0CX51 143 aaKnown RBP4.77□□□□□ -1.65
YIR043CYIR043C RPS16BP0CX52 143 aaKnown RBP4.77□□□□□ -1.65
YIR043CYIR043C GCD2P12754 651 aaPredicted RBP4.77□□□□□ -1.65
YIR043CYIR043C CPR4P25334 318 aa4.77□□□□□ -1.65
YIR043CYIR043C YHR122WP38829 231 aa4.77□□□□□ -1.65
YIR043CYIR043C SEC9P40357 651 aa4.77□□□□□ -1.65
YIR043CYIR043C AIM20P40451 204 aa4.77□□□□□ -1.65
YIR043CYIR043C ERV25P54837 211 aaKnown RBP4.77□□□□□ -1.65
YIR043CYIR043C YMR317WQ04893 1140 aa4.77□□□□□ -1.65
YIR043CYIR043C YLR297WQ05899 129 aa4.77□□□□□ -1.65
YIR043CYIR043C STE23Q06010 1027 aa4.77□□□□□ -1.65
YIR043CYIR043C YCL021W-AQ96VH3 125 aa4.77□□□□□ -1.65
YIR043CYIR043C CKI1P20485 582 aa4.76□□□□□ -1.65
YIR043CYIR043C PHA2P32452 334 aa4.76□□□□□ -1.65
YIR043CYIR043C MNS1P32906 549 aa4.76□□□□□ -1.65
YIR043CYIR043C TIR2P33890 251 aa4.76□□□□□ -1.65
YIR043CYIR043C MRPL40P36534 297 aa4.76□□□□□ -1.65
YIR043CYIR043C SBE22P38814 852 aa4.76□□□□□ -1.65
YIR043CYIR043C YIL067CP40514 678 aa4.76□□□□□ -1.65
YIR043CYIR043C YIL029CP40538 142 aa4.76□□□□□ -1.65
YIR043CYIR043C COS1P53822 381 aa4.76□□□□□ -1.65
YIR043CYIR043C SHS1Q07657 551 aa4.76□□□□□ -1.65
YIR043CYIR043C ESA1Q08649 445 aa4.76□□□□□ -1.65
YIR043CYIR043C NDD1Q08887 554 aa4.76□□□□□ -1.65
YIR043CYIR043C TRP1P00912 224 aa4.75□□□□□ -1.65
YIR043CYIR043C PET18P25362 215 aa4.75□□□□□ -1.65
YIR043CYIR043C SSE1P32589 693 aaKnown RBP4.75□□□□□ -1.65
YIR043CYIR043C YHK8P38776 514 aa4.75□□□□□ -1.65
YIR043CYIR043C MNN9P39107 395 aaKnown RBP4.75□□□□□ -1.65
YIR043CYIR043C RTT105P40063 208 aa4.75□□□□□ -1.65
YIR043CYIR043C PRM5P40476 318 aa4.75□□□□□ -1.65
YIR043CYIR043C MPP10P47083 593 aaKnown RBP4.75□□□□□ -1.65
YIR043CYIR043C ABM1P47146 123 aa4.75□□□□□ -1.65
YIR043CYIR043C NUP116Q02630 1113 aa4.75□□□□□ -1.65
YIR043CYIR043C MSC3Q05812 728 aa4.75□□□□□ -1.65
YIR043CYIR043C CUR1Q06469 252 aa4.75□□□□□ -1.65
YIR043CYIR043C MDM36Q06820 579 aa4.75□□□□□ -1.65
YIR043CYIR043C DBP3P20447 523 aaKnown RBP4.74□□□□□ -1.65
YIR043CYIR043C RTC2P38279 296 aa4.74□□□□□ -1.65
YIR043CYIR043C MRM2P53123 320 aa4.74□□□□□ -1.65
YIR043CYIR043C APC5Q08683 685 aa4.74□□□□□ -1.65
YIR043CYIR043C RGS2Q99188 309 aa4.74□□□□□ -1.65
YIR043CYIR043C CYC3P06182 269 aa4.73□□□□□ -1.65
YIR043CYIR043C MXR2P25566 168 aa4.73□□□□□ -1.65
YIR043CYIR043C DPH5P32469 300 aaPredicted RBP4.73□□□□□ -1.65
YIR043CYIR043C VAM7P32912 316 aa4.73□□□□□ -1.65
YIR043CYIR043C PPQ1P32945 549 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms