RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	ARO3	P14843	370 aa	Known RBP	1.83	□□□□□ -2.12
DOT6	YER088C	SPR1	P32603	445 aa		1.83	□□□□□ -2.12
DOT6	YER088C	RRP4	P38792	359 aa	Known RBP	1.83	□□□□□ -2.12
DOT6	YER088C	SER3	P40054	469 aa		1.83	□□□□□ -2.12
DOT6	YER088C	SSU1	P41930	458 aa		1.83	□□□□□ -2.12
DOT6	YER088C	CAK1	P43568	368 aa	Predicted RBP	1.83	□□□□□ -2.12
DOT6	YER088C	GIP3	Q03016	1276 aa		1.83	□□□□□ -2.12
DOT6	YER088C	RSN1	Q03516	953 aa		1.83	□□□□□ -2.12
DOT6	YER088C	MUM3	Q08750	479 aa		1.83	□□□□□ -2.12
DOT6	YER088C	RRG7	Q08774	242 aa	Predicted RBP	1.83	□□□□□ -2.12
DOT6	YER088C	SRL2	Q12020	392 aa		1.83	□□□□□ -2.12
DOT6	YER088C	HRT3	Q12347	344 aa		1.83	□□□□□ -2.12
DOT6	YER088C	TY1B-A	O13527	1196 aa	Known RBP	1.82	□□□□□ -2.12
DOT6	YER088C	NFT1	P0CE68	1218 aa		1.82	□□□□□ -2.12
DOT6	YER088C	REV1	P12689	985 aa		1.82	□□□□□ -2.12
DOT6	YER088C	CLN1	P20437	546 aa		1.82	□□□□□ -2.12
DOT6	YER088C	CLB1	P24868	471 aa		1.82	□□□□□ -2.12
DOT6	YER088C	POT1	P27796	417 aa	Known RBP RIP-Chip data	1.82	□□□□□ -2.12	not detected
DOT6	YER088C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	1.82	□□□□□ -2.12	not detected
DOT6	YER088C	MPE1	P35728	441 aa	Known RBP	1.82	□□□□□ -2.12
DOT6	YER088C	PTK1	P36002	662 aa	Predicted RBP	1.82	□□□□□ -2.12
DOT6	YER088C	ASC1	P38011	319 aa	Known RBP	1.82	□□□□□ -2.12
DOT6	YER088C	RRT2	P38332	387 aa		1.82	□□□□□ -2.12
DOT6	YER088C	JLP2	P40206	208 aa		1.82	□□□□□ -2.12
DOT6	YER088C	PAN6	P40459	309 aa		1.82	□□□□□ -2.12
DOT6	YER088C	YPS6	P40583	537 aa		1.82	□□□□□ -2.12
DOT6	YER088C	OCA2	P53949	197 aa		1.82	□□□□□ -2.12
DOT6	YER088C	URH1	Q04179	340 aa		1.82	□□□□□ -2.12
DOT6	YER088C	HEL2	Q05580	639 aa	Known RBP	1.82	□□□□□ -2.12
DOT6	YER088C	DIS3	Q08162	1001 aa	Known RBP	1.82	□□□□□ -2.12
DOT6	YER088C	SNX3	Q08826	162 aa	Known RBP	1.82	□□□□□ -2.12
DOT6	YER088C	FMP27	Q06179	2628 aa		1.81	□□□□□ -2.12
DOT6	YER088C	TRP1	P00912	224 aa		1.81	□□□□□ -2.12
DOT6	YER088C	URA4	P20051	364 aa		1.81	□□□□□ -2.12
DOT6	YER088C	YEL045C	P32616	141 aa		1.81	□□□□□ -2.12
DOT6	YER088C	KKQ8	P36004	724 aa		1.81	□□□□□ -2.12
DOT6	YER088C	RRN10	P38204	145 aa		1.81	□□□□□ -2.12
DOT6	YER088C	SLM4	P38247	162 aa		1.81	□□□□□ -2.12
DOT6	YER088C	MTC6	P38849	526 aa		1.81	□□□□□ -2.12
DOT6	YER088C	NCA3	P46955	337 aa		1.81	□□□□□ -2.12
DOT6	YER088C	HER2	Q03557	464 aa		1.81	□□□□□ -2.12
DOT6	YER088C	SPC19	Q03954	165 aa		1.81	□□□□□ -2.12
DOT6	YER088C	MHR1	Q06630	226 aa		1.81	□□□□□ -2.12
DOT6	YER088C	RPP0	P05317	312 aa	Known RBP	1.81	□□□□□ -2.12
DOT6	YER088C	IMA3	P0CW40	589 aa		1.81	□□□□□ -2.12
DOT6	YER088C	IMA4	P0CW41	589 aa		1.81	□□□□□ -2.12
DOT6	YER088C	POX1	P13711	748 aa		1.81	□□□□□ -2.12
DOT6	YER088C	SNA3	P14359	133 aa		1.81	□□□□□ -2.12
DOT6	YER088C	REC107	P21651	314 aa		1.81	□□□□□ -2.12
DOT6	YER088C	CPR2	P23285	205 aa		1.81	□□□□□ -2.12
DOT6	YER088C	PTH1	P38876	190 aa	Known RBP	1.81	□□□□□ -2.12
DOT6	YER088C	PES4	P39684	611 aa		1.81	□□□□□ -2.12
DOT6	YER088C	SIM1	P40472	476 aa		1.81	□□□□□ -2.12
DOT6	YER088C	WWM1	P43582	211 aa	Known RBP	1.81	□□□□□ -2.12
DOT6	YER088C	AZR1	P50080	613 aa		1.81	□□□□□ -2.12
DOT6	YER088C	PHB2	P50085	310 aa		1.81	□□□□□ -2.12
DOT6	YER088C	SHE10	P53075	577 aa		1.81	□□□□□ -2.12
DOT6	YER088C	RPN9	Q04062	393 aa	Known RBP	1.81	□□□□□ -2.12
DOT6	YER088C	BCH1	Q05029	724 aa		1.81	□□□□□ -2.12
DOT6	YER088C	INM2	Q05533	292 aa		1.81	□□□□□ -2.12
DOT6	YER088C	DCS1	Q06151	350 aa		1.81	□□□□□ -2.12
DOT6	YER088C	IMA2	Q08295	589 aa		1.81	□□□□□ -2.12
DOT6	YER088C	RBD2	Q12270	262 aa		1.81	□□□□□ -2.12
DOT6	YER088C	ATG34	Q12292	412 aa		1.81	□□□□□ -2.12
DOT6	YER088C	CCH1	P50077	2039 aa		1.8	□□□□□ -2.12
DOT6	YER088C	YLR422W	Q06409	1932 aa		1.8	□□□□□ -2.12
DOT6	YER088C	RPL40A	P0CH08	128 aa	Known RBP	1.8	□□□□□ -2.12
DOT6	YER088C	RPL40B	P0CH09	128 aa	Known RBP	1.8	□□□□□ -2.12
DOT6	YER088C	DAL5	P15365	543 aa		1.8	□□□□□ -2.12
DOT6	YER088C	SPO7	P18410	259 aa		1.8	□□□□□ -2.12
DOT6	YER088C	PCF11	P39081	626 aa	Predicted RBP	1.8	□□□□□ -2.12
DOT6	YER088C	VHS2	P40463	436 aa		1.8	□□□□□ -2.12
DOT6	YER088C	CHS6	P40955	746 aa		1.8	□□□□□ -2.12
DOT6	YER088C	COS1	P53822	381 aa		1.8	□□□□□ -2.12
DOT6	YER088C	CWC25	P53854	179 aa	Known RBP	1.8	□□□□□ -2.12
DOT6	YER088C	BET5	Q03630	159 aa		1.8	□□□□□ -2.12
DOT6	YER088C	YMR130W	Q04223	302 aa		1.8	□□□□□ -2.12
DOT6	YER088C	HRI1	Q05905	244 aa	Known RBP	1.8	□□□□□ -2.12
DOT6	YER088C	TMC1	Q08422	150 aa	Predicted RBP	1.8	□□□□□ -2.12
DOT6	YER088C	UAF30	Q08747	228 aa		1.8	□□□□□ -2.12
DOT6	YER088C	PET123	P17558	318 aa		1.79	□□□□□ -2.12
DOT6	YER088C	BRF1	P29056	596 aa		1.79	□□□□□ -2.12
DOT6	YER088C	PHA2	P32452	334 aa		1.79	□□□□□ -2.12
DOT6	YER088C	MUD1	P32605	298 aa	Known RBP	1.79	□□□□□ -2.12
DOT6	YER088C	DBP7	P36120	742 aa	Known RBP	1.79	□□□□□ -2.12
DOT6	YER088C	MRPL4	P36517	319 aa		1.79	□□□□□ -2.12
DOT6	YER088C	TIS11	P47977	285 aa		1.79	□□□□□ -2.12
DOT6	YER088C	SDT1	P53078	280 aa		1.79	□□□□□ -2.12
DOT6	YER088C	RHO5	P53879	331 aa	Known RBP	1.79	□□□□□ -2.12
DOT6	YER088C	YLR152C	P54072	576 aa		1.79	□□□□□ -2.12
DOT6	YER088C	HOT1	Q03213	719 aa		1.79	□□□□□ -2.12
DOT6	YER088C	REX4	Q08237	289 aa		1.79	□□□□□ -2.12
DOT6	YER088C	MTR10	Q99189	972 aa		1.79	□□□□□ -2.12
DOT6	YER088C	HXT1	P32465	570 aa		1.79	□□□□□ -2.12
DOT6	YER088C	MNS1	P32906	549 aa		1.79	□□□□□ -2.12
DOT6	YER088C	YKL097C	P34245	136 aa		1.79	□□□□□ -2.12
DOT6	YER088C	HEL1	P36113	551 aa		1.79	□□□□□ -2.12
DOT6	YER088C	MMS4	P38257	691 aa		1.79	□□□□□ -2.12
DOT6	YER088C	STP2	P38704	541 aa		1.79	□□□□□ -2.12
DOT6	YER088C	STN1	P38960	494 aa		1.79	□□□□□ -2.12

Retrieved 100 of 5,963 RNA–protein pairs in 176.5 ms