RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	IES4	Q08561	116 aa		2.71	□□□□□ -1.98
RPN3	YER021W	YPL199C	Q08954	240 aa		2.71	□□□□□ -1.98
RPN3	YER021W	TAF10	Q12030	206 aa		2.71	□□□□□ -1.98
RPN3	YER021W	SFI1	Q12369	946 aa		2.71	□□□□□ -1.98
RPN3	YER021W	CLC1	P17891	233 aa		2.7	□□□□□ -1.98
RPN3	YER021W	RPI1	P23250	407 aa	Known RBP	2.7	□□□□□ -1.98
RPN3	YER021W	APE2	P32454	952 aa	Known RBP	2.7	□□□□□ -1.98
RPN3	YER021W	BYE1	P36106	594 aa		2.7	□□□□□ -1.98
RPN3	YER021W	MIX23	P38162	196 aa		2.7	□□□□□ -1.98
RPN3	YER021W	MMS4	P38257	691 aa		2.7	□□□□□ -1.98
RPN3	YER021W	RFC3	P38629	340 aa		2.7	□□□□□ -1.98
RPN3	YER021W	OSW5	P40219	148 aa		2.7	□□□□□ -1.98
RPN3	YER021W	MDM30	Q05930	598 aa		2.7	□□□□□ -1.98
RPN3	YER021W	YLR456W	Q06199	204 aa		2.7	□□□□□ -1.98
RPN3	YER021W	YPR022C	Q12139	1133 aa		2.7	□□□□□ -1.98
RPN3	YER021W	YIL046W-A	Q3E7Z4	54 aa		2.7	□□□□□ -1.98
RPN3	YER021W	RAD3	P06839	778 aa		2.7	□□□□□ -1.98
RPN3	YER021W	REV1	P12689	985 aa		2.7	□□□□□ -1.98
RPN3	YER021W	TPM1	P17536	199 aa	Known RBP	2.7	□□□□□ -1.98
RPN3	YER021W	RPC53	P25441	422 aa		2.7	□□□□□ -1.98
RPN3	YER021W	GEX1	P25596	615 aa		2.7	□□□□□ -1.98
RPN3	YER021W	TIP1	P27654	210 aa	Predicted RBP	2.7	□□□□□ -1.98
RPN3	YER021W	ITR1	P30605	584 aa		2.7	□□□□□ -1.98
RPN3	YER021W	SIN4	P32259	974 aa		2.7	□□□□□ -1.98
RPN3	YER021W	COT1	P32798	439 aa		2.7	□□□□□ -1.98
RPN3	YER021W	ARA1	P38115	344 aa		2.7	□□□□□ -1.98
RPN3	YER021W	WSC4	P38739	605 aa		2.7	□□□□□ -1.98
RPN3	YER021W	MST28	P39552	234 aa		2.7	□□□□□ -1.98
RPN3	YER021W	OST1	P41543	476 aa	Known RBP	2.7	□□□□□ -1.98
RPN3	YER021W	YFL067W	P43537	175 aa		2.7	□□□□□ -1.98
RPN3	YER021W	ECM27	P47144	725 aa		2.7	□□□□□ -1.98
RPN3	YER021W	NRM1	P53718	249 aa		2.7	□□□□□ -1.98
RPN3	YER021W	GOR1	P53839	350 aa		2.7	□□□□□ -1.98
RPN3	YER021W	YIF1	P53845	314 aa	Known RBP	2.7	□□□□□ -1.98
RPN3	YER021W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
RPN3	YER021W	IBD2	P53892	351 aa		2.7	□□□□□ -1.98
RPN3	YER021W	RRP45	Q05636	305 aa	Known RBP	2.7	□□□□□ -1.98
RPN3	YER021W	SHS1	Q07657	551 aa		2.7	□□□□□ -1.98
RPN3	YER021W	ESA1	Q08649	445 aa		2.7	□□□□□ -1.98
RPN3	YER021W	YOR387C	Q08910	206 aa		2.7	□□□□□ -1.98
RPN3	YER021W	VAM3	Q12241	283 aa		2.7	□□□□□ -1.98
RPN3	YER021W	ERV2	Q12284	196 aa		2.7	□□□□□ -1.98
RPN3	YER021W	HIS4	P00815	799 aa	Known RBP	2.69	□□□□□ -1.98
RPN3	YER021W	MSF1	P08425	469 aa		2.69	□□□□□ -1.98
RPN3	YER021W	RPL4A	P10664	362 aa	Known RBP	2.69	□□□□□ -1.98
RPN3	YER021W	SPT15	P13393	240 aa	Known RBP	2.69	□□□□□ -1.98
RPN3	YER021W	CPR4	P25334	318 aa		2.69	□□□□□ -1.98
RPN3	YER021W	PRR1	P28708	518 aa		2.69	□□□□□ -1.98
RPN3	YER021W	YME2	P32843	850 aa		2.69	□□□□□ -1.98
RPN3	YER021W	CYM1	P32898	989 aa		2.69	□□□□□ -1.98
RPN3	YER021W	SHE3	P38272	425 aa	Known RBP	2.69	□□□□□ -1.98
RPN3	YER021W	YHR054C	P38780	354 aa		2.69	□□□□□ -1.98
RPN3	YER021W	ERG10	P41338	398 aa	Known RBP	2.69	□□□□□ -1.98
RPN3	YER021W	RPS0B	P46654	252 aa	Known RBP	2.69	□□□□□ -1.98
RPN3	YER021W	COQ5	P49017	307 aa		2.69	□□□□□ -1.98
RPN3	YER021W	RPL4B	P49626	362 aa	Known RBP	2.69	□□□□□ -1.98
RPN3	YER021W	SHE10	P53075	577 aa		2.69	□□□□□ -1.98
RPN3	YER021W	ELP3	Q02908	557 aa	Known RBP	2.69	□□□□□ -1.98
RPN3	YER021W	PRM6	Q04705	352 aa		2.69	□□□□□ -1.98
RPN3	YER021W	YLH47	Q06493	454 aa		2.69	□□□□□ -1.98
RPN3	YER021W	RRP12	Q12754	1228 aa	Known RBP	2.69	□□□□□ -1.98
RPN3	YER021W	COX3	P00420	269 aa		2.68	□□□□□ -1.98
RPN3	YER021W	DAL82	P21705	255 aa		2.68	□□□□□ -1.98
RPN3	YER021W	NAM9	P27929	486 aa		2.68	□□□□□ -1.98
RPN3	YER021W	BEM1	P29366	551 aa		2.68	□□□□□ -1.98
RPN3	YER021W	HIR2	P32480	875 aa		2.68	□□□□□ -1.98
RPN3	YER021W	YBL059W	P34224	193 aa		2.68	□□□□□ -1.98
RPN3	YER021W	YBR056W	P38081	501 aa		2.68	□□□□□ -1.98
RPN3	YER021W	SIF2	P38262	535 aa		2.68	□□□□□ -1.98
RPN3	YER021W	SDS24	P38314	527 aa		2.68	□□□□□ -1.98
RPN3	YER021W	ATG12	P38316	186 aa		2.68	□□□□□ -1.98
RPN3	YER021W	PFS1	P38872	237 aa		2.68	□□□□□ -1.98
RPN3	YER021W	YJR011C	P47086	261 aa	Predicted RBP	2.68	□□□□□ -1.98
RPN3	YER021W	COS5	P47187	383 aa		2.68	□□□□□ -1.98
RPN3	YER021W	SSN8	P47821	323 aa		2.68	□□□□□ -1.98
RPN3	YER021W	FRE4	P53746	719 aa		2.68	□□□□□ -1.98
RPN3	YER021W	PGA2	P53903	129 aa		2.68	□□□□□ -1.98
RPN3	YER021W	SUR7	P54003	302 aa		2.68	□□□□□ -1.98
RPN3	YER021W	RRN11	Q04712	507 aa		2.68	□□□□□ -1.98
RPN3	YER021W	ROY1	Q04847	553 aa		2.68	□□□□□ -1.98
RPN3	YER021W	PBA1	Q05778	276 aa		2.68	□□□□□ -1.98
RPN3	YER021W	COS7	Q07788	383 aa		2.68	□□□□□ -1.98
RPN3	YER021W	RPN8	Q08723	338 aa	Known RBP	2.68	□□□□□ -1.98
RPN3	YER021W	TIM18	Q08749	192 aa		2.68	□□□□□ -1.98
RPN3	YER021W	MUM3	Q08750	479 aa		2.68	□□□□□ -1.98
RPN3	YER021W	RKM1	Q08961	583 aa	Predicted RBP	2.68	□□□□□ -1.98
RPN3	YER021W	IPP1	P00817	287 aa	Known RBP	2.67	□□□□□ -1.98
RPN3	YER021W	ILV5	P06168	395 aa	Known RBP	2.67	□□□□□ -1.98
RPN3	YER021W	RHB1	P25378	209 aa		2.67	□□□□□ -1.98
RPN3	YER021W	YCR051W	P25631	222 aa		2.67	□□□□□ -1.98
RPN3	YER021W	BRF1	P29056	596 aa		2.67	□□□□□ -1.98
RPN3	YER021W	DEG1	P31115	442 aa	Known RBP	2.67	□□□□□ -1.98
RPN3	YER021W	TKL2	P33315	681 aa		2.67	□□□□□ -1.98
RPN3	YER021W	PIM1	P36775	1133 aa		2.67	□□□□□ -1.98
RPN3	YER021W	RIB5	P38145	238 aa		2.67	□□□□□ -1.98
RPN3	YER021W	NTC20	P38302	140 aa	Predicted RBP	2.67	□□□□□ -1.98
RPN3	YER021W	FAA2	P39518	744 aa		2.67	□□□□□ -1.98
RPN3	YER021W	TIF34	P40217	347 aa	Known RBP	2.67	□□□□□ -1.98
RPN3	YER021W	SHQ1	P40486	507 aa	Predicted RBP	2.67	□□□□□ -1.98
RPN3	YER021W	DSN1	P40568	576 aa		2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms