RNA–Protein interactions for RNA: YER002W

NOP16, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene NOP16, Length 696 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP16	YER002W	DIA3	P52290	468 aa		4.6	□□□□□ -1.67
NOP16	YER002W	ESF2	P53743	316 aa	Known RBP	4.6	□□□□□ -1.67
NOP16	YER002W	DYN3	Q04949	312 aa		4.6	□□□□□ -1.67
NOP16	YER002W	YLR456W	Q06199	204 aa		4.6	□□□□□ -1.67
NOP16	YER002W	GGA1	Q06336	557 aa		4.6	□□□□□ -1.67
NOP16	YER002W	BCP1	Q06338	283 aa		4.6	□□□□□ -1.67
NOP16	YER002W	STP4	Q07351	490 aa		4.6	□□□□□ -1.67
NOP16	YER002W	ENB1	Q08299	606 aa		4.6	□□□□□ -1.67
NOP16	YER002W	GET4	Q12125	312 aa		4.6	□□□□□ -1.67
NOP16	YER002W	LEU9	Q12166	604 aa	Known RBP	4.6	□□□□□ -1.67
NOP16	YER002W	RUP1	Q12242	671 aa		4.6	□□□□□ -1.67
NOP16	YER002W	NKP1	Q12493	238 aa		4.6	□□□□□ -1.67
NOP16	YER002W	MET3	P08536	511 aa		4.59	□□□□□ -1.67
NOP16	YER002W	MSS116	P15424	664 aa	Known RBP	4.59	□□□□□ -1.67
NOP16	YER002W	SAN1	P22470	610 aa		4.59	□□□□□ -1.67
NOP16	YER002W	RVS161	P25343	265 aa	Known RBP	4.59	□□□□□ -1.67
NOP16	YER002W	SLM5	P25345	492 aa	Known RBP	4.59	□□□□□ -1.67
NOP16	YER002W	SSH4	P32343	579 aa		4.59	□□□□□ -1.67
NOP16	YER002W	SRB5	P32585	307 aa		4.59	□□□□□ -1.67
NOP16	YER002W	MRPL17	P36528	281 aa		4.59	□□□□□ -1.67
NOP16	YER002W	ASC1	P38011	319 aa	Known RBP	4.59	□□□□□ -1.67
NOP16	YER002W	EHT1	P38295	451 aa		4.59	□□□□□ -1.67
NOP16	YER002W	ALG5	P40350	334 aa		4.59	□□□□□ -1.67
NOP16	YER002W	HPM1	P40481	377 aa		4.59	□□□□□ -1.67
NOP16	YER002W	GAB1	P41733	394 aa		4.59	□□□□□ -1.67
NOP16	YER002W	UPF3	P48412	387 aa	Known RBP	4.59	□□□□□ -1.67
NOP16	YER002W	TEX1	P53851	422 aa	Known RBP	4.59	□□□□□ -1.67
NOP16	YER002W	YPL071C	Q02864	156 aa		4.59	□□□□□ -1.67
NOP16	YER002W	ACL4	Q03771	387 aa		4.59	□□□□□ -1.67
NOP16	YER002W	DLT1	Q04216	342 aa		4.59	□□□□□ -1.67
NOP16	YER002W	HSP31	Q04432	237 aa		4.59	□□□□□ -1.67
NOP16	YER002W	SWF1	Q04629	336 aa		4.59	□□□□□ -1.67
NOP16	YER002W	YHC1	Q05900	231 aa	Known RBP	4.59	□□□□□ -1.67
NOP16	YER002W	STP3	Q05937	343 aa		4.59	□□□□□ -1.67
NOP16	YER002W	VPS74	Q06385	345 aa		4.59	□□□□□ -1.67
NOP16	YER002W	PSR1	Q07800	427 aa		4.59	□□□□□ -1.67
NOP16	YER002W	REX4	Q08237	289 aa		4.59	□□□□□ -1.67
NOP16	YER002W	IRC13	Q08630	104 aa		4.59	□□□□□ -1.67
NOP16	YER002W	YPR022C	Q12139	1133 aa		4.59	□□□□□ -1.67
NOP16	YER002W	POM34	Q12445	299 aa		4.59	□□□□□ -1.67
NOP16	YER002W	SKM1	Q12469	655 aa		4.59	□□□□□ -1.67
NOP16	YER002W	YKL018C-A	Q3E7A7	99 aa		4.59	□□□□□ -1.67
NOP16	YER002W	PNO1	Q99216	274 aa	Known RBP	4.59	□□□□□ -1.67
NOP16	YER002W	YOL087C	Q99247	1116 aa		4.59	□□□□□ -1.67
NOP16	YER002W	YPR096C	O13587	100 aa		4.58	□□□□□ -1.68
NOP16	YER002W	ARG81	P05085	880 aa		4.58	□□□□□ -1.68
NOP16	YER002W	RAP1	P11938	827 aa		4.58	□□□□□ -1.68
NOP16	YER002W	NTH1	P32356	751 aa		4.58	□□□□□ -1.68
NOP16	YER002W	ERG1	P32476	496 aa	Known RBP	4.58	□□□□□ -1.68
NOP16	YER002W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
NOP16	YER002W	RPT5	P33297	434 aa	Known RBP	4.58	□□□□□ -1.68
NOP16	YER002W	ROT2	P38138	954 aa		4.58	□□□□□ -1.68
NOP16	YER002W	RGI1	P40043	161 aa	Predicted RBP	4.58	□□□□□ -1.68
NOP16	YER002W	VRG4	P40107	337 aa		4.58	□□□□□ -1.68
NOP16	YER002W	YNL195C	P40168	261 aa		4.58	□□□□□ -1.68
NOP16	YER002W	YIL001W	P40560	513 aa		4.58	□□□□□ -1.68
NOP16	YER002W	PRM10	P42946	383 aa		4.58	□□□□□ -1.68
NOP16	YER002W	BIT61	P47041	543 aa		4.58	□□□□□ -1.68
NOP16	YER002W	MUP1	P50276	574 aa		4.58	□□□□□ -1.68
NOP16	YER002W	BIO3	P50277	480 aa		4.58	□□□□□ -1.68
NOP16	YER002W	FHN1	P53279	174 aa		4.58	□□□□□ -1.68
NOP16	YER002W	YMR010W	Q03687	405 aa		4.58	□□□□□ -1.68
NOP16	YER002W	RRP45	Q05636	305 aa	Known RBP	4.58	□□□□□ -1.68
NOP16	YER002W	SSQ1	Q05931	657 aa	Predicted RBP	4.58	□□□□□ -1.68
NOP16	YER002W	DIC1	Q06143	298 aa		4.58	□□□□□ -1.68
NOP16	YER002W	PDR8	Q06149	701 aa		4.58	□□□□□ -1.68
NOP16	YER002W	ATG26	Q06321	1198 aa		4.58	□□□□□ -1.68
NOP16	YER002W	VPS36	Q06696	566 aa		4.58	□□□□□ -1.68
NOP16	YER002W	YLL007C	Q07799	665 aa		4.58	□□□□□ -1.68
NOP16	YER002W	YLR030W	Q07967	263 aa		4.58	□□□□□ -1.68
NOP16	YER002W	RRP40	Q08285	240 aa	Known RBP	4.58	□□□□□ -1.68
NOP16	YER002W	MUM3	Q08750	479 aa		4.58	□□□□□ -1.68
NOP16	YER002W	RPN6	Q12377	434 aa		4.58	□□□□□ -1.68
NOP16	YER002W	SNF8	Q12483	233 aa		4.58	□□□□□ -1.68
NOP16	YER002W	POL2	P21951	2222 aa	Known RBP	4.58	□□□□□ -1.68
NOP16	YER002W	THP2	O13539	261 aa	Known RBP	4.57	□□□□□ -1.68
NOP16	YER002W	ATP2	P00830	511 aa	Known RBP	4.57	□□□□□ -1.68
NOP16	YER002W	ARG3	P05150	338 aa		4.57	□□□□□ -1.68
NOP16	YER002W	STE7	P06784	515 aa		4.57	□□□□□ -1.68
NOP16	YER002W	PRP2	P20095	876 aa	Predicted RBP	4.57	□□□□□ -1.68
NOP16	YER002W	REC107	P21651	314 aa		4.57	□□□□□ -1.68
NOP16	YER002W	MGR1	P25573	417 aa		4.57	□□□□□ -1.68
NOP16	YER002W	CWH43	P25618	953 aa		4.57	□□□□□ -1.68
NOP16	YER002W	IDH2	P28241	369 aa	Known RBP	4.57	□□□□□ -1.68
NOP16	YER002W	SEC17	P32602	292 aa		4.57	□□□□□ -1.68
NOP16	YER002W	CAT2	P32796	670 aa	Known RBP	4.57	□□□□□ -1.68
NOP16	YER002W	OAR1	P35731	278 aa		4.57	□□□□□ -1.68
NOP16	YER002W	CAB3	P36076	571 aa		4.57	□□□□□ -1.68
NOP16	YER002W	MNL1	P38888	796 aa		4.57	□□□□□ -1.68
NOP16	YER002W	JEM1	P40358	645 aa		4.57	□□□□□ -1.68
NOP16	YER002W	MAM33	P40513	266 aa		4.57	□□□□□ -1.68
NOP16	YER002W	CFD1	P40558	293 aa		4.57	□□□□□ -1.68
NOP16	YER002W	PAC11	P40960	533 aa		4.57	□□□□□ -1.68
NOP16	YER002W	BUD8	P41698	603 aa		4.57	□□□□□ -1.68
NOP16	YER002W	PSA1	P41940	361 aa	Known RBP	4.57	□□□□□ -1.68
NOP16	YER002W	NOP9	P47077	666 aa	Known RBP	4.57	□□□□□ -1.68
NOP16	YER002W	NRM1	P53718	249 aa		4.57	□□□□□ -1.68
NOP16	YER002W	SVL3	Q03088	825 aa	Known RBP	4.57	□□□□□ -1.68
NOP16	YER002W	YML122C	Q03207	126 aa		4.57	□□□□□ -1.68
NOP16	YER002W	HMO1	Q03973	246 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms