RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C SAC7P17121 654 aa2.14□□□□□ -2.07
SSD1YDR293C THR1P17423 357 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C FPR1P20081 114 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C BUD5P25300 642 aaPredicted RBP2.14□□□□□ -2.07
SSD1YDR293C CHA1P25379 360 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C PPZ1P26570 692 aa2.14□□□□□ -2.07
SSD1YDR293C ITR1P30605 584 aa2.14□□□□□ -2.07
SSD1YDR293C CSE2P33308 149 aa2.14□□□□□ -2.07
SSD1YDR293C ASK1P35734 292 aa2.14□□□□□ -2.07
SSD1YDR293C MRPL17P36528 281 aa2.14□□□□□ -2.07
SSD1YDR293C YBR285WP38354 144 aa2.14□□□□□ -2.07
SSD1YDR293C OPT1P40897 799 aa2.14□□□□□ -2.07
SSD1YDR293C IRC7P43623 340 aa2.14□□□□□ -2.07
SSD1YDR293C LOH1P47055 219 aa2.14□□□□□ -2.07
SSD1YDR293C SNX4P47057 423 aa2.14□□□□□ -2.07
SSD1YDR293C GCV1P48015 400 aa2.14□□□□□ -2.07
SSD1YDR293C COG1P53079 417 aa2.14□□□□□ -2.07
SSD1YDR293C YGR015CP53208 328 aa2.14□□□□□ -2.07
SSD1YDR293C VPS62P53285 467 aa2.14□□□□□ -2.07
SSD1YDR293C SED5Q01590 340 aa2.14□□□□□ -2.07
SSD1YDR293C SEC13Q04491 297 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C ARO10Q06408 635 aa2.14□□□□□ -2.07
SSD1YDR293C CDD1Q06549 142 aa2.14□□□□□ -2.07
SSD1YDR293C SYO1Q07395 620 aa2.14□□□□□ -2.07
SSD1YDR293C DIN7Q12086 430 aa2.14□□□□□ -2.07
SSD1YDR293C HUA2Q12134 243 aa2.14□□□□□ -2.07
SSD1YDR293C PEX11Q12462 236 aa2.14□□□□□ -2.07
SSD1YDR293C SRN2Q99176 213 aa2.14□□□□□ -2.07
SSD1YDR293C RAS2P01120 322 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C RPS17AP02407 136 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C PET122P10355 254 aa2.14□□□□□ -2.07
SSD1YDR293C RPL4AP10664 362 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C RPS17BP14127 136 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C EPT1P22140 391 aa2.14□□□□□ -2.07
SSD1YDR293C RPS1BP23248 255 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C POT1P27796 417 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SSD1YDR293C MRPL3P36516 390 aa2.14□□□□□ -2.07
SSD1YDR293C NAT2P37293 288 aa2.14□□□□□ -2.07
SSD1YDR293C AGP2P38090 596 aa2.14□□□□□ -2.07
SSD1YDR293C ECM8P38246 354 aa2.14□□□□□ -2.07
SSD1YDR293C COS111P38308 924 aa2.14□□□□□ -2.07
SSD1YDR293C EGD2P38879 174 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C GGC1P38988 300 aa2.14□□□□□ -2.07
SSD1YDR293C DHH1P39517 506 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C RGI1P40043 161 aaPredicted RBP2.14□□□□□ -2.07
SSD1YDR293C OSW5P40219 148 aa2.14□□□□□ -2.07
SSD1YDR293C ATM1P40416 690 aa2.14□□□□□ -2.07
SSD1YDR293C HXT9P40885 567 aa2.14□□□□□ -2.07
SSD1YDR293C IDP2P41939 412 aa2.14□□□□□ -2.07
SSD1YDR293C CAF16P43569 289 aa2.14□□□□□ -2.07
SSD1YDR293C NUP85P46673 744 aa2.14□□□□□ -2.07
SSD1YDR293C MDV1P47025 714 aa2.14□□□□□ -2.07
SSD1YDR293C RPL4BP49626 362 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C AIF1P52923 378 aa2.14□□□□□ -2.07
SSD1YDR293C SCW11P53189 542 aa2.14□□□□□ -2.07
SSD1YDR293C MTM1P53320 366 aa2.14□□□□□ -2.07
SSD1YDR293C GAS3Q03655 524 aa2.14□□□□□ -2.07
SSD1YDR293C YMR206WQ03695 313 aa2.14□□□□□ -2.07
SSD1YDR293C TY1A-DR2Q03964 440 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C GAD1Q04792 585 aa2.14□□□□□ -2.07
SSD1YDR293C YDR286CQ05530 114 aa2.14□□□□□ -2.07
SSD1YDR293C PEX10Q05568 337 aa2.14□□□□□ -2.07
SSD1YDR293C SPO77Q06134 477 aa2.14□□□□□ -2.07
SSD1YDR293C RRP9Q06506 573 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C GPI11Q06636 219 aa2.14□□□□□ -2.07
SSD1YDR293C SWA2Q06677 668 aa2.14□□□□□ -2.07
SSD1YDR293C LOT6Q07923 191 aa2.14□□□□□ -2.07
SSD1YDR293C MSB2P32334 1306 aa2.14□□□□□ -2.07
SSD1YDR293C ECM29P38737 1868 aa2.14□□□□□ -2.07
SSD1YDR293C TRP3P00937 484 aa2.14□□□□□ -2.07
SSD1YDR293C COX9P07255 59 aa2.14□□□□□ -2.07
SSD1YDR293C YOL163WP0CF20 169 aa2.14□□□□□ -2.07
SSD1YDR293C HOM2P13663 365 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C DPM1P14020 267 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C YCR016WP25617 290 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C PTC6P25646 442 aa2.14□□□□□ -2.07
SSD1YDR293C TFB1P32776 642 aa2.14□□□□□ -2.07
SSD1YDR293C NPL6P32832 435 aa2.14□□□□□ -2.07
SSD1YDR293C VPS17P32913 551 aa2.14□□□□□ -2.07
SSD1YDR293C AFR1P33304 620 aa2.14□□□□□ -2.07
SSD1YDR293C SLM4P38247 162 aa2.14□□□□□ -2.07
SSD1YDR293C EFM1P38732 585 aa2.14□□□□□ -2.07
SSD1YDR293C SMB1P40018 196 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C PAC11P40960 533 aa2.14□□□□□ -2.07
SSD1YDR293C NBP35P52920 328 aa2.14□□□□□ -2.07
SSD1YDR293C YNL181WP53878 407 aa2.14□□□□□ -2.07
SSD1YDR293C CUZ1P53899 274 aa2.14□□□□□ -2.07
SSD1YDR293C MRPL13Q02204 264 aa2.14□□□□□ -2.07
SSD1YDR293C MRPS16Q02608 121 aa2.14□□□□□ -2.07
SSD1YDR293C ELP3Q02908 557 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C GCN5Q03330 439 aa2.14□□□□□ -2.07
SSD1YDR293C RSN1Q03516 953 aa2.14□□□□□ -2.07
SSD1YDR293C ARA2Q04212 335 aa2.14□□□□□ -2.07
SSD1YDR293C YMR111CQ04461 462 aaPredicted RBP2.14□□□□□ -2.07
SSD1YDR293C MCM21Q06675 368 aa2.14□□□□□ -2.07
SSD1YDR293C ENT4Q07872 247 aa2.14□□□□□ -2.07
SSD1YDR293C PST2Q12335 198 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C JLP1Q12358 412 aa2.14□□□□□ -2.07
SSD1YDR293C RRP12Q12754 1228 aaKnown RBP2.14□□□□□ -2.07
SSD1YDR293C ISN1Q99312 450 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 513.3 ms