RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W EDC3P39998 551 aaKnown RBP3.56□□□□□ -1.84
TSR1YDL060W SNL1P40548 159 aa3.56□□□□□ -1.84
TSR1YDL060W RPN11P43588 306 aaKnown RBP3.56□□□□□ -1.84
TSR1YDL060W FMP33P46998 180 aa3.56□□□□□ -1.84
TSR1YDL060W ZRG17P53735 605 aa3.56□□□□□ -1.84
TSR1YDL060W LCB4Q12246 624 aa3.56□□□□□ -1.84
TSR1YDL060W MER1P16523 270 aa3.55□□□□□ -1.84
TSR1YDL060W BOS1P25385 244 aa3.55□□□□□ -1.84
TSR1YDL060W GEX1P25596 615 aa3.55□□□□□ -1.84
TSR1YDL060W ICL1P28240 557 aaPredicted RBP3.55□□□□□ -1.84
TSR1YDL060W RAD14P28519 371 aa3.55□□□□□ -1.84
TSR1YDL060W HXT1P32465 570 aa3.55□□□□□ -1.84
TSR1YDL060W SRB4P32569 687 aa3.55□□□□□ -1.84
TSR1YDL060W COT1P32798 439 aa3.55□□□□□ -1.84
TSR1YDL060W RPC34P32910 317 aa3.55□□□□□ -1.84
TSR1YDL060W LOC1P43586 204 aaPredicted RBP3.55□□□□□ -1.84
TSR1YDL060W AIM22P47051 409 aa3.55□□□□□ -1.84
TSR1YDL060W YJL043WP47053 257 aa3.55□□□□□ -1.84
TSR1YDL060W YGL108CP53139 140 aa3.55□□□□□ -1.84
TSR1YDL060W MPP6P53725 186 aaPredicted RBP3.55□□□□□ -1.84
TSR1YDL060W YDR476CQ03362 224 aa3.55□□□□□ -1.84
TSR1YDL060W ATG38Q05789 226 aaKnown RBP3.55□□□□□ -1.84
TSR1YDL060W CYK3Q07533 885 aa3.55□□□□□ -1.84
TSR1YDL060W YAP7Q08182 245 aa3.55□□□□□ -1.84
TSR1YDL060W SMC5Q08204 1093 aa3.55□□□□□ -1.84
TSR1YDL060W CRT10Q08226 957 aa3.55□□□□□ -1.84
TSR1YDL060W YRM1Q12340 786 aa3.55□□□□□ -1.84
TSR1YDL060W YOR012WQ12351 137 aa3.55□□□□□ -1.84
TSR1YDL060W YLR422WQ06409 1932 aa3.55□□□□□ -1.84
TSR1YDL060W RPL7AP05737 244 aaKnown RBP3.55□□□□□ -1.84
TSR1YDL060W COR1P07256 457 aa3.55□□□□□ -1.84
TSR1YDL060W GAC1P28006 793 aa3.55□□□□□ -1.84
TSR1YDL060W UBC6P33296 250 aaPredicted RBP3.55□□□□□ -1.84
TSR1YDL060W BMH2P34730 273 aaKnown RBP3.55□□□□□ -1.84
TSR1YDL060W TSC10P38342 320 aa3.55□□□□□ -1.84
TSR1YDL060W BZZ1P38822 633 aa3.55□□□□□ -1.84
TSR1YDL060W PET100P38958 111 aa3.55□□□□□ -1.84
TSR1YDL060W MAM33P40513 266 aa3.55□□□□□ -1.84
TSR1YDL060W LIA1P47120 325 aaKnown RBP3.55□□□□□ -1.84
TSR1YDL060W YET2Q04210 160 aa3.55□□□□□ -1.84
TSR1YDL060W ECI1Q05871 280 aa3.55□□□□□ -1.84
TSR1YDL060W RPL7BQ12213 244 aaKnown RBP3.55□□□□□ -1.84
TSR1YDL060W REP1P03871 373 aa3.54□□□□□ -1.84
TSR1YDL060W CMD1P06787 147 aaKnown RBP3.54□□□□□ -1.84
TSR1YDL060W CAR2P07991 424 aaKnown RBP3.54□□□□□ -1.84
TSR1YDL060W PMA2P19657 947 aa3.54□□□□□ -1.84
TSR1YDL060W PET18P25362 215 aa3.54□□□□□ -1.84
TSR1YDL060W CLG1P35190 452 aa3.54□□□□□ -1.84
TSR1YDL060W YKL070WP36087 169 aa3.54□□□□□ -1.84
TSR1YDL060W RPL32P38061 130 aaKnown RBP3.54□□□□□ -1.84
TSR1YDL060W VBA2P38358 474 aaKnown RBP3.54□□□□□ -1.84
TSR1YDL060W PHM8P40025 321 aa3.54□□□□□ -1.84
TSR1YDL060W ATG27P46989 271 aa3.54□□□□□ -1.84
TSR1YDL060W ROG1P53118 685 aa3.54□□□□□ -1.84
TSR1YDL060W HOP2P53187 214 aa3.54□□□□□ -1.84
TSR1YDL060W FMP48P53233 369 aa3.54□□□□□ -1.84
TSR1YDL060W SKI8Q02793 397 aaPredicted RBP3.54□□□□□ -1.84
TSR1YDL060W EKI1Q03764 534 aa3.54□□□□□ -1.84
TSR1YDL060W ATG17Q06410 417 aa3.54□□□□□ -1.84
TSR1YDL060W RUP1Q12242 671 aa3.54□□□□□ -1.84
TSR1YDL060W LDB17Q12342 491 aa3.54□□□□□ -1.84
TSR1YDL060W SAM1P10659 382 aaKnown RBP3.54□□□□□ -1.84
TSR1YDL060W SEN2P16658 377 aa3.54□□□□□ -1.84
TSR1YDL060W CDC42P19073 191 aa3.54□□□□□ -1.84
TSR1YDL060W BEM1P29366 551 aa3.54□□□□□ -1.84
TSR1YDL060W TPS2P31688 896 aaKnown RBP3.54□□□□□ -1.84
TSR1YDL060W DOA4P32571 926 aa3.54□□□□□ -1.84
TSR1YDL060W YKR015CP36111 568 aa3.54□□□□□ -1.84
TSR1YDL060W ECM31P38122 312 aa3.54□□□□□ -1.84
TSR1YDL060W PEX32P38292 413 aa3.54□□□□□ -1.84
TSR1YDL060W PCA1P38360 1216 aa3.54□□□□□ -1.84
TSR1YDL060W KEL1P38853 1164 aaKnown RBP3.54□□□□□ -1.84
TSR1YDL060W MNL1P38888 796 aa3.54□□□□□ -1.84
TSR1YDL060W YGL185CP53100 379 aa3.54□□□□□ -1.84
TSR1YDL060W DBP6P53734 629 aaKnown RBP3.54□□□□□ -1.84
TSR1YDL060W SED5Q01590 340 aa3.54□□□□□ -1.84
TSR1YDL060W ADE13Q05911 482 aaKnown RBP3.54□□□□□ -1.84
TSR1YDL060W DXO1Q06349 442 aa3.54□□□□□ -1.84
TSR1YDL060W YEH2Q07950 538 aa3.54□□□□□ -1.84
TSR1YDL060W CLP1Q08685 445 aaPredicted RBP3.54□□□□□ -1.84
TSR1YDL060W RPS10AQ08745 105 aaPredicted RBP3.54□□□□□ -1.84
TSR1YDL060W TOM1Q03280 3268 aa3.53□□□□□ -1.84
TSR1YDL060W COX3P00420 269 aa3.53□□□□□ -1.84
TSR1YDL060W GAL3P13045 520 aa3.53□□□□□ -1.84
TSR1YDL060W RNR3P21672 869 aaKnown RBP3.53□□□□□ -1.84
TSR1YDL060W SEC62P21825 274 aa3.53□□□□□ -1.84
TSR1YDL060W IMP3P32899 183 aaPredicted RBP3.53□□□□□ -1.84
TSR1YDL060W ARC19P33204 171 aaKnown RBP3.53□□□□□ -1.84
TSR1YDL060W LSM12P38828 187 aaKnown RBP3.53□□□□□ -1.84
TSR1YDL060W ANS1P38832 159 aa3.53□□□□□ -1.84
TSR1YDL060W YHR210CP38893 341 aa3.53□□□□□ -1.84
TSR1YDL060W MBB1P39534 108 aa3.53□□□□□ -1.84
TSR1YDL060W ALB1P47019 175 aaPredicted RBP3.53□□□□□ -1.84
TSR1YDL060W TAF6P53040 516 aa3.53□□□□□ -1.84
TSR1YDL060W SLG1P54867 378 aa3.53□□□□□ -1.84
TSR1YDL060W SWP1Q02795 286 aa3.53□□□□□ -1.84
TSR1YDL060W YMR099CQ03161 297 aaKnown RBP3.53□□□□□ -1.84
TSR1YDL060W YMR010WQ03687 405 aa3.53□□□□□ -1.84
TSR1YDL060W FAR10Q06001 478 aa3.53□□□□□ -1.84
TSR1YDL060W YLL007CQ07799 665 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms