RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 RWDD3Q9Y3V2 267 aa15.92■□□□□ 0.14
CCND1-204ENST00000539241 PCDHA2Q9Y5H9 948 aa15.92■□□□□ 0.14
CCND1-204ENST00000539241 SQORQ9Y6N5 450 aa15.92■□□□□ 0.14
CCND1-204ENST00000539241 CCDC196A0A1B0GTZ2 297 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 POTEB3A0JP26 581 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 C5orf67F2Z3F1 127 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 DDX39AO00148 427 aaKnown RBP15.91■□□□□ 0.14
CCND1-204ENST00000539241 ATG7O95352 703 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 RB1P06400 928 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 LINC00271P0C7V0 271 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 SCG2P13521 617 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 CPA1P15085 419 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 RPS6KB1P23443 525 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 BMPR1AP36894 532 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 RBM25P49756 843 aaKnown RBP15.91■□□□□ 0.14
CCND1-204ENST00000539241 TMEM62Q0P6H9 643 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 APOBRQ0VD83 1088 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 TCEAL5Q5H9L2 206 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 POTEBQ6S5H4 581 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 PLA2G4DQ86XP0 818 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 NSUN3Q9H649 340 aaKnown RBP15.91■□□□□ 0.14
CCND1-204ENST00000539241 EPHX3Q9H6B9 360 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 ZSWIM6Q9HCJ5 1215 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 RAPGEFL1Q9UHV5 662 aa15.91■□□□□ 0.14
CCND1-204ENST00000539241 IGKV6D-21A0A0A0MT36 114 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 SMIM35A0A1B0GVV1 85 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 FAM86B1E9PN63 330 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 BACH1O14867 736 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 CCNE2O96020 404 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 FAM86B2P0C5J1 330 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 SLC26A2P50443 739 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 BTG3Q14201 252 aaPredicted RBP15.9■□□□□ 0.14
CCND1-204ENST00000539241 FAM160B1Q5W0V3 765 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 MTHFD1LQ6UB35 978 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 ABHD15Q6UXT9 468 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 Q6ZUG5 572 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 CLP1Q92989 425 aaKnown RBP15.9■□□□□ 0.14
CCND1-204ENST00000539241 BRF1Q92994 677 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 ZNF689Q96CS4 500 aaPredicted RBP15.9■□□□□ 0.14
CCND1-204ENST00000539241 C11orf84Q9BUA3 381 aaPredicted RBP15.9■□□□□ 0.14
CCND1-204ENST00000539241 FTHL17Q9BXU8 183 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 CYP46A1Q9Y6A2 500 aa15.9■□□□□ 0.14
CCND1-204ENST00000539241 ESYT2A0FGR8 921 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 H3BQ06 376 aaPredicted RBP15.89■□□□□ 0.13
CCND1-204ENST00000539241 HBP1O60381 514 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 DGKIO75912 1065 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 CYP3A4P08684 503 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 IL9P15248 144 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 PAK2Q13177 524 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 PTCRAQ6ISU1 281 aaPredicted RBP15.89■□□□□ 0.13
CCND1-204ENST00000539241 RUFY3Q7L099 469 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 RTN4RL1Q86UN2 441 aaPredicted RBP15.89■□□□□ 0.13
CCND1-204ENST00000539241 NPAS4Q8IUM7 802 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 CCDC60Q8IWA6 550 aaPredicted RBP15.89■□□□□ 0.13
CCND1-204ENST00000539241 NME8Q8N427 588 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 NEK9Q8TD19 979 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 ATP8B4Q8TF62 1192 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
CCND1-204ENST00000539241 PABPC5Q96DU9 382 aaKnown RBP15.89■□□□□ 0.13
CCND1-204ENST00000539241 CELF4Q9BZC1 486 aaKnown RBP15.89■□□□□ 0.13
CCND1-204ENST00000539241 ZMYND12Q9H0C1 365 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 LMAN2LQ9H0V9 348 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 PADI3Q9ULW8 664 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 IGSF9BQ9UPX0 1349 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 KDM3AQ9Y4C1 1321 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 KAT6AQ92794 2004 aa15.89■□□□□ 0.13
CCND1-204ENST00000539241 IGLV3-22A0A075B6J6 115 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 IPO5O00410 1097 aaKnown RBP15.88■□□□□ 0.13
CCND1-204ENST00000539241 GRM6O15303 877 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 DHX15O43143 795 aaKnown RBP15.88■□□□□ 0.13
CCND1-204ENST00000539241 KLRC1P26715 233 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 KRT76Q01546 638 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 PKN1Q16512 942 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 PUS10Q3MIT2 529 aaKnown RBP15.88■□□□□ 0.13
CCND1-204ENST00000539241 MCTP2Q6DN12 878 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 MIS18BP1Q6P0N0 1132 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 PDXDC2PQ6P474 469 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 EP400NLQ6ZTU2 488 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 FAM178BQ8IXR5 827 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 FBXL16Q8N461 479 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 CRYGNQ8WXF5 182 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 KHSRPQ92945 711 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCND1-204ENST00000539241 TBC1D32Q96NH3 1257 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 UIMC1Q96RL1 719 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 UPF3BQ9BZI7 483 aaKnown RBP15.88■□□□□ 0.13
CCND1-204ENST00000539241 C6orf50Q9HD87 102 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 CD320Q9NPF0 282 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 ZNF302Q9NR11 478 aa15.88■□□□□ 0.13
CCND1-204ENST00000539241 NID2Q14112 1375 aa15.87■□□□□ 0.13
CCND1-204ENST00000539241 GRXCR2A6NFK2 248 aa15.87■□□□□ 0.13
CCND1-204ENST00000539241 ADAMTS3O15072 1205 aa15.87■□□□□ 0.13
CCND1-204ENST00000539241 PRPF3O43395 683 aaKnown RBP15.87■□□□□ 0.13
CCND1-204ENST00000539241 STAG3L1P0CL83 205 aa15.87■□□□□ 0.13
CCND1-204ENST00000539241 SETQ01105 290 aaPredicted RBP15.87■□□□□ 0.13
CCND1-204ENST00000539241 COL19A1Q14993 1142 aa15.87■□□□□ 0.13
CCND1-204ENST00000539241 TMEM266Q2M3C6 531 aa15.87■□□□□ 0.13
CCND1-204ENST00000539241 ZNF484Q5JVG2 852 aa15.87■□□□□ 0.13
CCND1-204ENST00000539241 SWSAP1Q6NVH7 229 aa15.87■□□□□ 0.13
CCND1-204ENST00000539241 CMTR2Q8IYT2 770 aaKnown RBP15.87■□□□□ 0.13
CCND1-204ENST00000539241 GJD3Q8N144 294 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms