RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 DDX39AO00148 427 aaKnown RBP21.41■■□□□ 1.02
TMEM53-201ENST00000372235 DHX15O43143 795 aaKnown RBP21.41■■□□□ 1.02
TMEM53-201ENST00000372235 GHRP10912 638 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 GRB10Q13322 594 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 SKIV2LQ15477 1246 aaKnown RBP21.41■■□□□ 1.02
TMEM53-201ENST00000372235 PRR16Q569H4 304 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 FAM117BQ6P1L5 589 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 CKAP2LQ8IYA6 745 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 ZNF710Q8N1W2 664 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 BBXQ8WY36 941 aaPredicted RBP21.41■■□□□ 1.02
TMEM53-201ENST00000372235 FAM167AQ96KS9 214 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 NCOA5Q9HCD5 579 aaKnown RBP21.41■■□□□ 1.02
TMEM53-201ENST00000372235 VPS54Q9P1Q0 977 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 PCDHA4Q9UN74 947 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 RWDD3Q9Y3V2 267 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 TRPV2Q9Y5S1 764 aa21.41■■□□□ 1.02
TMEM53-201ENST00000372235 MICAL3Q7RTP6 2002 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 KDM3AQ9Y4C1 1321 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 LCHNA4D1U4 455 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 CCNE2O96020 404 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 LPIN1Q14693 890 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 PTPROQ16827 1216 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 FBXO47Q5MNV8 452 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 MTHFD1LQ6UB35 978 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 TMCO2Q7Z6W1 182 aaPredicted RBP21.4■■□□□ 1.02
TMEM53-201ENST00000372235 RIT2Q99578 217 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 UPF3BQ9BZI7 483 aaKnown RBP21.4■■□□□ 1.02
TMEM53-201ENST00000372235 FAM49AQ9H0Q0 323 aaPredicted RBP21.4■■□□□ 1.02
TMEM53-201ENST00000372235 MYO9BQ13459 2157 aa21.4■■□□□ 1.02
TMEM53-201ENST00000372235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.39■■□□□ 1.01
TMEM53-201ENST00000372235 WDR64B1ANS9 1081 aa21.39■■□□□ 1.01
TMEM53-201ENST00000372235 RFXAPO00287 272 aa21.39■■□□□ 1.01
TMEM53-201ENST00000372235 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.01
TMEM53-201ENST00000372235 SFNP31947 248 aa21.39■■□□□ 1.01
TMEM53-201ENST00000372235 SWSAP1Q6NVH7 229 aa21.39■■□□□ 1.01
TMEM53-201ENST00000372235 FBXO22Q8NEZ5 403 aa21.39■■□□□ 1.01
TMEM53-201ENST00000372235 IL17RAQ96F46 866 aa21.39■■□□□ 1.01
TMEM53-201ENST00000372235 CELF4Q9BZC1 486 aaKnown RBP21.39■■□□□ 1.01
TMEM53-201ENST00000372235 SLKQ9H2G2 1235 aaPredicted RBP21.39■■□□□ 1.01
TMEM53-201ENST00000372235 SAMM50Q9Y512 469 aa21.39■■□□□ 1.01
TMEM53-201ENST00000372235 MAFBQ9Y5Q3 323 aaPredicted RBP21.39■■□□□ 1.01
TMEM53-201ENST00000372235 COL4A6Q14031 1691 aa21.39■■□□□ 1.01
TMEM53-201ENST00000372235 PTPRSQ13332 1948 aa21.39■■□□□ 1.01
TMEM53-201ENST00000372235 EPOPA6NHQ4 379 aa21.38■■□□□ 1.01
TMEM53-201ENST00000372235 UPP2O95045 317 aa21.38■■□□□ 1.01
TMEM53-201ENST00000372235 KLRC1P26715 233 aa21.38■■□□□ 1.01
TMEM53-201ENST00000372235 CCDC60Q8IWA6 550 aaPredicted RBP21.38■■□□□ 1.01
TMEM53-201ENST00000372235 BLIDQ8IZY5 108 aa21.38■■□□□ 1.01
TMEM53-201ENST00000372235 DAGLBQ8NCG7 672 aa21.38■■□□□ 1.01
TMEM53-201ENST00000372235 SUGCTQ9HAC7 445 aa21.38■■□□□ 1.01
TMEM53-201ENST00000372235 IGSF9BQ9UPX0 1349 aa21.37■■□□□ 1.01
TMEM53-201ENST00000372235 MAGEB2O15479 319 aa21.37■■□□□ 1.01
TMEM53-201ENST00000372235 ARHGEF15O94989 841 aa21.37■■□□□ 1.01
TMEM53-201ENST00000372235 JAK3P52333 1124 aa21.37■■□□□ 1.01
TMEM53-201ENST00000372235 MOXD1Q6UVY6 613 aa21.37■■□□□ 1.01
TMEM53-201ENST00000372235 RDM1Q8NG50 284 aa21.37■■□□□ 1.01
TMEM53-201ENST00000372235 WASF1Q92558 559 aa21.37■■□□□ 1.01
TMEM53-201ENST00000372235 NRBP2Q9NSY0 501 aa21.37■■□□□ 1.01
TMEM53-201ENST00000372235 UNC80Q8N2C7 3258 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 ENPP3O14638 875 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 LPXNO60711 386 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 GAS7O60861 476 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 STAG3L1P0CL83 205 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 TMOD1P28289 359 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 PAK2Q13177 524 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 Q4G0T1 1027 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 KRT25Q7Z3Z0 450 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 FIBCD1Q8N539 461 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 RASGRP4Q8TDF6 673 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 TBCKQ8TEA7 893 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 HLA-CQ95604 372 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 NAP1L4Q99733 375 aaKnown RBP21.36■■□□□ 1.01
TMEM53-201ENST00000372235 TEKT3Q9BXF9 490 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 MTUS1Q9ULD2 1270 aa21.36■■□□□ 1.01
TMEM53-201ENST00000372235 STK36Q9NRP7 1315 aa21.35■■□□□ 1.01
TMEM53-201ENST00000372235 RB1P06400 928 aa21.35■■□□□ 1.01
TMEM53-201ENST00000372235 STK3Q13188 491 aa21.35■■□□□ 1.01
TMEM53-201ENST00000372235 NONOQ15233 471 aaKnown RBP eCLIP21.35■■□□□ 1.01
TMEM53-201ENST00000372235 GDPD5Q8WTR4 605 aa21.35■■□□□ 1.01
TMEM53-201ENST00000372235 PRDM6Q9NQX0 595 aa21.35■■□□□ 1.01
TMEM53-201ENST00000372235 DISC1Q9NRI5 854 aa21.35■■□□□ 1.01
TMEM53-201ENST00000372235 EYSQ5T1H1 3165 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 CYP3A7-CYP3A51PA0A087WV96 503 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 GPR182O15218 404 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 MSH4O15457 936 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 CYP3A7P24462 503 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 EPC2Q52LR7 807 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 LRCH2Q5VUJ6 765 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 TMEM192Q8IY95 271 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 TRAPPC12Q8WVT3 735 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 LENG9Q96B70 501 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 GABBR1Q9UBS5 961 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 SIP14410 1827 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 CHD9Q3L8U1 2897 aa21.34■■□□□ 1.01
TMEM53-201ENST00000372235 H3BNC9 293 aa21.33■■□□□ 1.01
TMEM53-201ENST00000372235 PFKFB2O60825 505 aa21.33■■□□□ 1.01
TMEM53-201ENST00000372235 PPFIA3O75145 1194 aa21.33■■□□□ 1.01
TMEM53-201ENST00000372235 CD52P31358 61 aa21.33■■□□□ 1.01
TMEM53-201ENST00000372235 NPAS4Q8IUM7 802 aa21.33■■□□□ 1.01
TMEM53-201ENST00000372235 SLC5A5Q92911 643 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms