RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	ZWF1	P11412	505 aa	Known RBP	10.87	□□□□□ -0.67
DED1	YOR204W	DAL82	P21705	255 aa		10.87	□□□□□ -0.67
DED1	YOR204W	RPS1B	P23248	255 aa	Known RBP	10.87	□□□□□ -0.67
DED1	YOR204W	ZTA1	P38230	334 aa	Known RBP	10.87	□□□□□ -0.67
DED1	YOR204W	YHR210C	P38893	341 aa		10.87	□□□□□ -0.67
DED1	YOR204W	AGP3	P43548	558 aa		10.87	□□□□□ -0.67
DED1	YOR204W	ERG13	P54839	491 aa	Known RBP	10.87	□□□□□ -0.67
DED1	YOR204W	SPO77	Q06134	477 aa		10.87	□□□□□ -0.67
DED1	YOR204W	DTD1	Q07648	150 aa	Known RBP	10.87	□□□□□ -0.67
DED1	YOR204W	FAS1	P07149	2051 aa	Known RBP	10.87	□□□□□ -0.67
DED1	YOR204W	DMC1	P25453	334 aa		10.86	□□□□□ -0.67
DED1	YOR204W	GDH2	P33327	1092 aa	Known RBP	10.86	□□□□□ -0.67
DED1	YOR204W	SPC34	P36131	295 aa		10.86	□□□□□ -0.67
DED1	YOR204W	AIM20	P40451	204 aa		10.86	□□□□□ -0.67
DED1	YOR204W	JHD2	P47156	728 aa	Predicted RBP	10.86	□□□□□ -0.67
DED1	YOR204W	YTM1	Q12024	460 aa	Predicted RBP	10.86	□□□□□ -0.67
DED1	YOR204W	CLB3	P24870	427 aa		10.86	□□□□□ -0.67
DED1	YOR204W	UBC8	P28263	218 aa		10.86	□□□□□ -0.67
DED1	YOR204W	TAF14	P35189	244 aa		10.86	□□□□□ -0.67
DED1	YOR204W	MRPL15	P36523	253 aa		10.86	□□□□□ -0.67
DED1	YOR204W	UME6	P39001	836 aa		10.86	□□□□□ -0.67
DED1	YOR204W	GIP2	P40036	548 aa		10.86	□□□□□ -0.67
DED1	YOR204W	UTP25	P40498	721 aa	Known RBP	10.86	□□□□□ -0.67
DED1	YOR204W	TOM22	P49334	152 aa		10.86	□□□□□ -0.67
DED1	YOR204W	URA4	P20051	364 aa		10.85	□□□□□ -0.67
DED1	YOR204W	RPB5	P20434	215 aa		10.85	□□□□□ -0.67
DED1	YOR204W	SNL1	P40548	159 aa		10.85	□□□□□ -0.67
DED1	YOR204W	APN1	P22936	367 aa		10.84	□□□□□ -0.67
DED1	YOR204W	YHL012W	P38709	493 aa		10.84	□□□□□ -0.67
DED1	YOR204W	FAA3	P39002	694 aa		10.84	□□□□□ -0.67
DED1	YOR204W	YOR389W	Q08912	624 aa		10.84	□□□□□ -0.67
DED1	YOR204W	YOL159C-A	Q3E769	90 aa		10.84	□□□□□ -0.67
DED1	YOR204W	YKL033W-A	Q86ZR7	236 aa		10.84	□□□□□ -0.67
DED1	YOR204W	GRR1	P24814	1151 aa		10.84	□□□□□ -0.67
DED1	YOR204W	YJU2	P28320	278 aa	Predicted RBP	10.84	□□□□□ -0.67
DED1	YOR204W	MSN2	P33748	704 aa		10.84	□□□□□ -0.67
DED1	YOR204W	MDJ1	P35191	511 aa		10.84	□□□□□ -0.67
DED1	YOR204W	PZF1	P39933	429 aa		10.84	□□□□□ -0.67
DED1	YOR204W	YJL068C	P40363	299 aa		10.84	□□□□□ -0.67
DED1	YOR204W	TIM54	P47045	478 aa		10.84	□□□□□ -0.67
DED1	YOR204W	RRT8	Q08219	342 aa		10.84	□□□□□ -0.67
DED1	YOR204W	PUS7	Q08647	676 aa	Known RBP	10.84	□□□□□ -0.67
DED1	YOR204W	FDH1	Q08911	376 aa		10.84	□□□□□ -0.67
DED1	YOR204W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	10.84	□□□□□ -0.67	not detected
DED1	YOR204W	STE6	P12866	1290 aa		10.83	□□□□□ -0.68
DED1	YOR204W	YCK1	P23291	538 aa		10.83	□□□□□ -0.68
DED1	YOR204W	RER1	P25560	188 aa		10.83	□□□□□ -0.68
DED1	YOR204W	BUD14	P27637	709 aa		10.83	□□□□□ -0.68
DED1	YOR204W	TPC1	P53257	314 aa		10.83	□□□□□ -0.68
DED1	YOR204W	SYF2	P53277	215 aa	Predicted RBP	10.83	□□□□□ -0.68
DED1	YOR204W	YDR239C	Q03780	787 aa		10.83	□□□□□ -0.68
DED1	YOR204W	RAD30	Q04049	632 aa		10.83	□□□□□ -0.68
DED1	YOR204W	DBP9	Q06218	594 aa	Known RBP	10.83	□□□□□ -0.68
DED1	YOR204W	YPR174C	Q06616	221 aa	Predicted RBP	10.83	□□□□□ -0.68
DED1	YOR204W	LOT6	Q07923	191 aa		10.83	□□□□□ -0.68
DED1	YOR204W	CAK1	P43568	368 aa	Predicted RBP	10.82	□□□□□ -0.68
DED1	YOR204W	BNA3	P47039	444 aa	Known RBP	10.82	□□□□□ -0.68
DED1	YOR204W	TRS23	Q03784	219 aa		10.82	□□□□□ -0.68
DED1	YOR204W	TAF3	Q12297	353 aa		10.82	□□□□□ -0.68
DED1	YOR204W	RHO1	P06780	209 aa	Known RBP	10.81	□□□□□ -0.68
DED1	YOR204W	MCK1	P21965	375 aa	Known RBP	10.81	□□□□□ -0.68
DED1	YOR204W	POL4	P25615	582 aa		10.81	□□□□□ -0.68
DED1	YOR204W	RPN2	P32565	945 aa	Known RBP	10.81	□□□□□ -0.68
DED1	YOR204W	NUF2	P33895	451 aa		10.81	□□□□□ -0.68
DED1	YOR204W	SPC42	P36094	363 aa		10.81	□□□□□ -0.68
DED1	YOR204W	BIG1	P38813	335 aa		10.81	□□□□□ -0.68
DED1	YOR204W	YGR201C	P42936	225 aa		10.81	□□□□□ -0.68
DED1	YOR204W	MTQ1	P53944	314 aa		10.81	□□□□□ -0.68
DED1	YOR204W	RSC9	Q03124	581 aa		10.81	□□□□□ -0.68
DED1	YOR204W	CTL1	Q03220	320 aa	Known RBP	10.81	□□□□□ -0.68
DED1	YOR204W	RSF1	Q05043	376 aa		10.81	□□□□□ -0.68
DED1	YOR204W	GLE1	Q12315	538 aa		10.81	□□□□□ -0.68
DED1	YOR204W	TEL1	P38110	2787 aa		10.81	□□□□□ -0.68
DED1	YOR204W	HO	P09932	586 aa		10.81	□□□□□ -0.68
DED1	YOR204W	ATR1	P13090	542 aa		10.81	□□□□□ -0.68
DED1	YOR204W	AAC3	P18238	307 aa		10.81	□□□□□ -0.68
DED1	YOR204W	WBP1	P33767	430 aa	Known RBP	10.81	□□□□□ -0.68
DED1	YOR204W	ELP4	Q02884	456 aa	Known RBP	10.81	□□□□□ -0.68
DED1	YOR204W	YPR097W	Q06839	1073 aa		10.81	□□□□□ -0.68
DED1	YOR204W	YLR126C	Q12288	251 aa		10.81	□□□□□ -0.68
DED1	YOR204W	TSC13	Q99190	310 aa		10.81	□□□□□ -0.68
DED1	YOR204W	KAP122	P32767	1081 aa		10.8	□□□□□ -0.68
DED1	YOR204W	FES1	P38260	290 aa		10.8	□□□□□ -0.68
DED1	YOR204W	TRR2	P38816	342 aa		10.8	□□□□□ -0.68
DED1	YOR204W	RIM13	Q03792	727 aa		10.8	□□□□□ -0.68
DED1	YOR204W	KRE28	Q04431	385 aa		10.8	□□□□□ -0.68
DED1	YOR204W	NAT4	Q04751	285 aa		10.8	□□□□□ -0.68
DED1	YOR204W	AI4	P03878	556 aa		10.79	□□□□□ -0.68
DED1	YOR204W	SAC7	P17121	654 aa		10.79	□□□□□ -0.68
DED1	YOR204W	PTP2	P29461	750 aa		10.79	□□□□□ -0.68
DED1	YOR204W	FAA1	P30624	700 aa	Known RBP	10.79	□□□□□ -0.68
DED1	YOR204W	APE2	P32454	952 aa	Known RBP	10.79	□□□□□ -0.68
DED1	YOR204W	LEU5	P38702	357 aa		10.79	□□□□□ -0.68
DED1	YOR204W	TPA1	P40032	644 aa	Known RBP	10.79	□□□□□ -0.68
DED1	YOR204W	RIO2	P40160	425 aa	Known RBP	10.79	□□□□□ -0.68
DED1	YOR204W	YRB2	P40517	327 aa		10.79	□□□□□ -0.68
DED1	YOR204W	YGR012W	P53206	393 aa		10.79	□□□□□ -0.68
DED1	YOR204W	DCP2	P53550	970 aa	Known RBP	10.79	□□□□□ -0.68
DED1	YOR204W	RRN5	Q02983	363 aa		10.79	□□□□□ -0.68
DED1	YOR204W	YMR099C	Q03161	297 aa	Known RBP	10.79	□□□□□ -0.68

Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms