RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C RPS8AP0CX39 200 aaKnown RBP2.53□□□□□ -2
SHE4YOR035C RPS8BP0CX40 200 aaKnown RBP2.53□□□□□ -2
SHE4YOR035C MDH1P17505 334 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SHE4YOR035C CPR2P23285 205 aa2.53□□□□□ -2
SHE4YOR035C POP5P28005 173 aa2.53□□□□□ -2
SHE4YOR035C PRE5P40302 234 aaKnown RBP2.53□□□□□ -2
SHE4YOR035C SFH5P47008 294 aa2.53□□□□□ -2
SHE4YOR035C BCH1Q05029 724 aa2.53□□□□□ -2
SHE4YOR035C IMA2Q08295 589 aa2.53□□□□□ -2
SHE4YOR035C ATG34Q12292 412 aa2.53□□□□□ -2
SHE4YOR035C YRM1Q12340 786 aa2.53□□□□□ -2
SHE4YOR035C ADH2P00331 348 aaKnown RBP2.52□□□□□ -2.01
SHE4YOR035C RAD57P25301 460 aa2.52□□□□□ -2.01
SHE4YOR035C HEL1P36113 551 aa2.52□□□□□ -2.01
SHE4YOR035C SRP72P38688 640 aaKnown RBP2.52□□□□□ -2.01
SHE4YOR035C PEX25Q02969 394 aa2.52□□□□□ -2.01
SHE4YOR035C TY2B-BQ12491 1770 aa2.52□□□□□ -2.01
SHE4YOR035C ADE4P04046 510 aaKnown RBP2.52□□□□□ -2.01
SHE4YOR035C CYC3P06182 269 aa2.52□□□□□ -2.01
SHE4YOR035C ISY1P21374 235 aaPredicted RBP2.52□□□□□ -2.01
SHE4YOR035C RVS161P25343 265 aaKnown RBP2.52□□□□□ -2.01
SHE4YOR035C SER3P40054 469 aa2.52□□□□□ -2.01
SHE4YOR035C SDT1P53078 280 aa2.52□□□□□ -2.01
SHE4YOR035C TMC1Q08422 150 aaPredicted RBP2.52□□□□□ -2.01
SHE4YOR035C SMC6Q12749 1114 aa2.52□□□□□ -2.01
SHE4YOR035C NAM2P11325 894 aa2.51□□□□□ -2.01
SHE4YOR035C CHK1P38147 527 aa2.51□□□□□ -2.01
SHE4YOR035C VHS2P40463 436 aa2.51□□□□□ -2.01
SHE4YOR035C ADD37Q03233 198 aa2.51□□□□□ -2.01
SHE4YOR035C AEP3Q12089 606 aa2.51□□□□□ -2.01
SHE4YOR035C RBD2Q12270 262 aa2.51□□□□□ -2.01
SHE4YOR035C ARO1P08566 1588 aaKnown RBP2.51□□□□□ -2.01
SHE4YOR035C PDR10P51533 1564 aa2.51□□□□□ -2.01
SHE4YOR035C TRM3Q07527 1436 aa2.51□□□□□ -2.01
SHE4YOR035C COX3P00420 269 aa2.51□□□□□ -2.01
SHE4YOR035C ATP3P38077 311 aaKnown RBP2.51□□□□□ -2.01
SHE4YOR035C JLP2P40206 208 aa2.51□□□□□ -2.01
SHE4YOR035C TOM22P49334 152 aa2.51□□□□□ -2.01
SHE4YOR035C YGR111WP53265 400 aa2.51□□□□□ -2.01
SHE4YOR035C URH1Q04179 340 aa2.51□□□□□ -2.01
SHE4YOR035C MMS22Q06164 1454 aa2.51□□□□□ -2.01
SHE4YOR035C USO1P25386 1790 aa2.5□□□□□ -2.01
SHE4YOR035C VMA8P32610 256 aaKnown RBP2.5□□□□□ -2.01
SHE4YOR035C OLA1P38219 394 aaKnown RBP2.5□□□□□ -2.01
SHE4YOR035C YIL029CP40538 142 aa2.5□□□□□ -2.01
SHE4YOR035C NUP116Q02630 1113 aa2.5□□□□□ -2.01
SHE4YOR035C STD1Q02794 444 aa2.5□□□□□ -2.01
SHE4YOR035C SNT309Q06091 175 aaPredicted RBP2.5□□□□□ -2.01
SHE4YOR035C RRP9Q06506 573 aaKnown RBP2.5□□□□□ -2.01
SHE4YOR035C IRC25Q07951 179 aa2.5□□□□□ -2.01
SHE4YOR035C SPP41P38904 1435 aa2.5□□□□□ -2.01
SHE4YOR035C YCL068CP25593 260 aa2.5□□□□□ -2.01
SHE4YOR035C KAR9P32526 644 aa2.5□□□□□ -2.01
SHE4YOR035C MRPL10P36520 322 aa2.5□□□□□ -2.01
SHE4YOR035C ZTA1P38230 334 aaKnown RBP2.5□□□□□ -2.01
SHE4YOR035C MMT1Q03218 510 aa2.5□□□□□ -2.01
SHE4YOR035C TPT1Q12272 230 aaKnown RBP2.5□□□□□ -2.01
SHE4YOR035C RPO21P04050 1733 aaKnown RBP2.5□□□□□ -2.01
SHE4YOR035C ARO3P14843 370 aaKnown RBP2.49□□□□□ -2.01
SHE4YOR035C NIP1P32497 812 aaKnown RBP2.49□□□□□ -2.01
SHE4YOR035C CYS4P32582 507 aaKnown RBP2.49□□□□□ -2.01
SHE4YOR035C PXA2P34230 853 aa2.49□□□□□ -2.01
SHE4YOR035C FAD1P38913 306 aa2.49□□□□□ -2.01
SHE4YOR035C GAT2P40209 560 aa2.49□□□□□ -2.01
SHE4YOR035C PIB2P53191 635 aa2.49□□□□□ -2.01
SHE4YOR035C NDE2Q07500 545 aa2.49□□□□□ -2.01
SHE4YOR035C DCI1Q08558 271 aa2.49□□□□□ -2.01
SHE4YOR035C SNU66Q12420 587 aaPredicted RBP2.49□□□□□ -2.01
SHE4YOR035C GDB1Q06625 1536 aa2.49□□□□□ -2.01
SHE4YOR035C DST1P07273 309 aa2.49□□□□□ -2.01
SHE4YOR035C RIM1P32445 135 aaKnown RBP2.49□□□□□ -2.01
SHE4YOR035C ASC1P38011 319 aaKnown RBP2.49□□□□□ -2.01
SHE4YOR035C YER079WP40052 210 aaKnown RBP2.49□□□□□ -2.01
SHE4YOR035C YPS6P40583 537 aa2.49□□□□□ -2.01
SHE4YOR035C MDE1P47095 244 aa2.49□□□□□ -2.01
SHE4YOR035C MTQ1P53944 314 aa2.49□□□□□ -2.01
SHE4YOR035C CCE1Q03702 353 aa2.49□□□□□ -2.01
SHE4YOR035C RPN9Q04062 393 aaKnown RBP2.49□□□□□ -2.01
SHE4YOR035C GYL1Q04322 720 aa2.49□□□□□ -2.01
SHE4YOR035C YLR456WQ06199 204 aa2.49□□□□□ -2.01
SHE4YOR035C MHR1Q06630 226 aa2.49□□□□□ -2.01
SHE4YOR035C TY1B-JR2P47100 1755 aaKnown RBP2.48□□□□□ -2.01
SHE4YOR035C TY1B-ER2Q03619 1755 aa2.48□□□□□ -2.01
SHE4YOR035C TY1B-MR1Q04214 1755 aa2.48□□□□□ -2.01
SHE4YOR035C TY1B-MR2Q04670 1755 aaKnown RBP2.48□□□□□ -2.01
SHE4YOR035C TY1B-LR1Q12088 1755 aaKnown RBP2.48□□□□□ -2.01
SHE4YOR035C TY1B-NL1Q12112 1755 aa2.48□□□□□ -2.01
SHE4YOR035C TY1B-GR1Q12141 1755 aa2.48□□□□□ -2.01
SHE4YOR035C TY1B-BLQ12490 1755 aa2.48□□□□□ -2.01
SHE4YOR035C PDE2P06776 526 aa2.48□□□□□ -2.01
SHE4YOR035C CDC21P06785 304 aa2.48□□□□□ -2.01
SHE4YOR035C RRP1P35178 278 aaPredicted RBP2.48□□□□□ -2.01
SHE4YOR035C SBE22P38814 852 aa2.48□□□□□ -2.01
SHE4YOR035C YHR131CP38835 850 aa2.48□□□□□ -2.01
SHE4YOR035C COX14P39103 70 aa2.48□□□□□ -2.01
SHE4YOR035C CIK1Q01649 594 aa2.48□□□□□ -2.01
SHE4YOR035C FDH1Q08911 376 aa2.48□□□□□ -2.01
SHE4YOR035C RUP1Q12242 671 aa2.48□□□□□ -2.01
SHE4YOR035C GPM3Q12326 303 aa2.48□□□□□ -2.01
SHE4YOR035C WTM1Q12363 437 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms